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The map label for this gene is 158318449

Identifier: 158318449

GI number: 158318449

Start: 8160432

End: 8161139

Strand: Direct

Name: 158318449

Synonym: Franean1_6717

Alternate gene names: NA

Gene position: 8160432-8161139 (Clockwise)

Preceding gene: 158318448

Following gene: 158318450

Centisome position: 90.85

GC content: 67.37

Gene sequence:

>708_bases
ATGGAGATACCAGCGGACCCAGGACGAGCTCCTCACACTCGGCCACCGCATTGGCGCGTCCACGATCGCCGGGTCCTGAC
GTCCCTGCGGCTGCCCCCGGCACCAACACGCCAGACCGACACGACGTGGCGACAGTTCCTACGCACCCAGGCACCGACGA
TGCTGGCGGTCGACTTCTTCCACGTGGACTGCGCCATGACGCTGCGGCGTCTGTACTGCTTCTTCGTCCCGGAAGCCGGC
TCCCGCTCCGTCCACATCCTCGAGGTCACCGCCCACCCCGACGGGCTGTGGACCACCCAACAGATCCGCAACCTCCTCAT
GGACCTCGGCGCCCGGACAGCCGACTTCCAGTTCCTGATCCGCGACCGCGCCGGACAATTCACCGCGTCCTTCGACGCGG
TCCTCGCCCACGCCGGCATCACCACCGTCAAGATCCCACCCCGGACGCCCCGGGCGAACGCCTACGCCGAACGGTTCGTC
CACACAGTCCGGACCGAGGTCACCGACCACATGCTGATCGTCGGCGAACGGCACCTACGTTCTGTCCTGGCCGAGTACGC
CGCCCACTACAACGGACGACGACCCCACCGCAGCCGCGACCTTCAACCACCCCGGCCCGACCACCCCGTCGCCGACCTGA
GCCAGGAACGGATCAAGCGCCGGCCTGTCCTCGACGGCCTGATCAACGAATACAAACGAGCCGCCTAA

Upstream 100 bases:

>100_bases
CTGATCGCACGGAAATGGACTACCCGCACCGGACAGGACGACCGCCGGTCAGCACGGAGATCGCAACCCTCATCGAGCGG
CTCGCGACCGAGAACACGAC

Downstream 100 bases:

>100_bases
AAGACCAGATCAACGCCGGTGACCGAGTTCCGGCACCCCACAGGAGAAATACTCGGCATCGGCCGAACCGCGAGCTACGA
ACTCGCCCGACAGGGAAAAT

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Integrase; Transposase; Integrase Catalytic Subunit; LOW QUALITY PROTEIN Integrase; LOW QUALITY PROTEIN Integrase Catalytic Region; Tranposase

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MEIPADPGRAPHTRPPHWRVHDRRVLTSLRLPPAPTRQTDTTWRQFLRTQAPTMLAVDFFHVDCAMTLRRLYCFFVPEAG
SRSVHILEVTAHPDGLWTTQQIRNLLMDLGARTADFQFLIRDRAGQFTASFDAVLAHAGITTVKIPPRTPRANAYAERFV
HTVRTEVTDHMLIVGERHLRSVLAEYAAHYNGRRPHRSRDLQPPRPDHPVADLSQERIKRRPVLDGLINEYKRAA

Sequences:

>Translated_235_residues
MEIPADPGRAPHTRPPHWRVHDRRVLTSLRLPPAPTRQTDTTWRQFLRTQAPTMLAVDFFHVDCAMTLRRLYCFFVPEAG
SRSVHILEVTAHPDGLWTTQQIRNLLMDLGARTADFQFLIRDRAGQFTASFDAVLAHAGITTVKIPPRTPRANAYAERFV
HTVRTEVTDHMLIVGERHLRSVLAEYAAHYNGRRPHRSRDLQPPRPDHPVADLSQERIKRRPVLDGLINEYKRAA
>Mature_235_residues
MEIPADPGRAPHTRPPHWRVHDRRVLTSLRLPPAPTRQTDTTWRQFLRTQAPTMLAVDFFHVDCAMTLRRLYCFFVPEAG
SRSVHILEVTAHPDGLWTTQQIRNLLMDLGARTADFQFLIRDRAGQFTASFDAVLAHAGITTVKIPPRTPRANAYAERFV
HTVRTEVTDHMLIVGERHLRSVLAEYAAHYNGRRPHRSRDLQPPRPDHPVADLSQERIKRRPVLDGLINEYKRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27008; Mature: 27008

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIPADPGRAPHTRPPHWRVHDRRVLTSLRLPPAPTRQTDTTWRQFLRTQAPTMLAVDFF
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHH
HVDCAMTLRRLYCFFVPEAGSRSVHILEVTAHPDGLWTTQQIRNLLMDLGARTADFQFLI
HHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHH
RDRAGQFTASFDAVLAHAGITTVKIPPRTPRANAYAERFVHTVRTEVTDHMLIVGERHLR
HHCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEECHHHHH
SVLAEYAAHYNGRRPHRSRDLQPPRPDHPVADLSQERIKRRPVLDGLINEYKRAA
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MEIPADPGRAPHTRPPHWRVHDRRVLTSLRLPPAPTRQTDTTWRQFLRTQAPTMLAVDFF
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHH
HVDCAMTLRRLYCFFVPEAGSRSVHILEVTAHPDGLWTTQQIRNLLMDLGARTADFQFLI
HHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHH
RDRAGQFTASFDAVLAHAGITTVKIPPRTPRANAYAERFVHTVRTEVTDHMLIVGERHLR
HHCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEECHHHHH
SVLAEYAAHYNGRRPHRSRDLQPPRPDHPVADLSQERIKRRPVLDGLINEYKRAA
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA