| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318438
Identifier: 158318438
GI number: 158318438
Start: 8142724
End: 8144190
Strand: Direct
Name: 158318438
Synonym: Franean1_6706
Alternate gene names: NA
Gene position: 8142724-8144190 (Clockwise)
Preceding gene: 158318437
Following gene: 158318439
Centisome position: 90.66
GC content: 73.89
Gene sequence:
>1467_bases GTGAGCGACCAGCTGTCCGCCGAGGACTACATCAAAGCCGTGCAGCGGCCCGATCTCGTGTTCAACCGTCCCGAGCTGAC CGAGGCCCGGTTCGACGTACACCCGATGCTGGGCATTCCCGTCCCGGCGTCGGGCAGCACGGCGGTCGTGTTCCGGGCGA CGGTCGGCGGCACCGCGCAGGCGTTACGGTTCTTCACCCGCGAGGACGCTTCCACCCAGCAGCGCTACACCGCGCTCAAC GCCTGGTTCACCGAGCGTGGGCTCACCGGCGACGTCGCCGGCTGCCGGTGGGTGGACGACGCGATTCTCATCAACGGTCG GCGCTGGCCGATGGTCCAGATGGAATGGGTGGACGGGCACACCCTCGACCGGCACGTCGAGGACCTTGTCGAGGCCGACG ACCGCGCGGCGCTGGCGACGCTCGCCGCGTCCTGGCGTGACCTGCTGCGCCGGACCCAGGCTGCCCGGTTCGCGCACGGC GACCTGCAACACGGCAACGTGCTCGTCGACACGGCCGGCCAGCTGCGCCTGGTCGACTTCGACAGCTCGTGGATCGCCCC GTTCACCGGCTCCTCGCCGCCGTCCGAGGGCGGACACCGCAACTACCAGCCCCAGAACCGGCCCTGGGGCCCGTGGATGG ACACCTTCCCCGGGCTCGTCATCTACCTCTCGCTGCTGGCGCTCGCCCGCGAGCCGAAGCAGTGGGAGCAGCTCAACGAC GGCGAGAACCTGCTCTTCCGCGACAGGGACTACCAGCCTCCGCACCGGACCGAGGTGTGGTCGTGGGTCGAGCGGCTGCA CGACCCACGGATCGACCAGCTCTCGGCCCGGCTGCGGGCCTGCTGCGCCCCAGGCTGGACGGCCACCGGCGACCTGGAAG GGCTGATCTCGGGGCCCGTCCCCTGGTGGACGCGCACGGCCGCCCACCCGCCAGCCGGCGCGTCGCCCGAGGCCACCACC GCACAGCCCGAGGCCACCACCGCGCCGCTCCCAGCCGTCACCGCGCCGGTCAAGGTCACCACCGCGACGGTCCAGGGCAC CACCGCGCCGCGCCAGACCACCGGCGCGCCGCCGTGGCCGCCTCCCCAGCCCGCTCCGCCGGCGGGGCAGACCGTGTGGT GGAAGCAGCCGCCCGGGCAGCGGCCGGAACCAGGGCGACCGGCACCGGCGCAGCCCGGACCGGCCCAGTCCGGACCGGCC CAGTCCGGACCGGCCCAGTGGGCTCCCGTGCGCGCCGCCGGGCGACGGCTGCGCGCAGTGGGCTGGTACCTGTTCGCAGC GGTCGCGGCCGTGGCGACCTGGGGGCTTGGCAGTGCCCTCATCGCCGCCACGCTGACCGGCCTGGCCCCCTCCGACGAGG CCGCCATCTCCGCGCTGCTCGCCCTCGTGCCAGCGCTGATCGTCCTCGTCCTCCTGGTCCGGCGACGGCGAAGGCGACGG CGACAACCACCGGGGAAGGCGCGATGA
Upstream 100 bases:
>100_bases TCGCCGACCAGCGCGCGGCCGGGCGGATGCGCAACGACGACGTCACGCTGCTGCGGGTCCGGCTCGCCACGGCCGAGCCC GGCGCACTGGTGGTGTGTTT
Downstream 100 bases:
>100_bases CGCAGCGGATGTTCGGCCCGTACCGCATCGAGGAGCTGCTGGGCCGCGGCGGGATGGGCGAGGTCTACCGGGCCTACGAC ACCGGGCAGCAGCGGATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Aminoglycoside Phosphotransferase; Mn2+-Dependent Serine/Threonine Protein Kinase
Number of amino acids: Translated: 488; Mature: 487
Protein sequence:
>488_residues MSDQLSAEDYIKAVQRPDLVFNRPELTEARFDVHPMLGIPVPASGSTAVVFRATVGGTAQALRFFTREDASTQQRYTALN AWFTERGLTGDVAGCRWVDDAILINGRRWPMVQMEWVDGHTLDRHVEDLVEADDRAALATLAASWRDLLRRTQAARFAHG DLQHGNVLVDTAGQLRLVDFDSSWIAPFTGSSPPSEGGHRNYQPQNRPWGPWMDTFPGLVIYLSLLALAREPKQWEQLND GENLLFRDRDYQPPHRTEVWSWVERLHDPRIDQLSARLRACCAPGWTATGDLEGLISGPVPWWTRTAAHPPAGASPEATT AQPEATTAPLPAVTAPVKVTTATVQGTTAPRQTTGAPPWPPPQPAPPAGQTVWWKQPPGQRPEPGRPAPAQPGPAQSGPA QSGPAQWAPVRAAGRRLRAVGWYLFAAVAAVATWGLGSALIAATLTGLAPSDEAAISALLALVPALIVLVLLVRRRRRRR RQPPGKAR
Sequences:
>Translated_488_residues MSDQLSAEDYIKAVQRPDLVFNRPELTEARFDVHPMLGIPVPASGSTAVVFRATVGGTAQALRFFTREDASTQQRYTALN AWFTERGLTGDVAGCRWVDDAILINGRRWPMVQMEWVDGHTLDRHVEDLVEADDRAALATLAASWRDLLRRTQAARFAHG DLQHGNVLVDTAGQLRLVDFDSSWIAPFTGSSPPSEGGHRNYQPQNRPWGPWMDTFPGLVIYLSLLALAREPKQWEQLND GENLLFRDRDYQPPHRTEVWSWVERLHDPRIDQLSARLRACCAPGWTATGDLEGLISGPVPWWTRTAAHPPAGASPEATT AQPEATTAPLPAVTAPVKVTTATVQGTTAPRQTTGAPPWPPPQPAPPAGQTVWWKQPPGQRPEPGRPAPAQPGPAQSGPA QSGPAQWAPVRAAGRRLRAVGWYLFAAVAAVATWGLGSALIAATLTGLAPSDEAAISALLALVPALIVLVLLVRRRRRRR RQPPGKAR >Mature_487_residues SDQLSAEDYIKAVQRPDLVFNRPELTEARFDVHPMLGIPVPASGSTAVVFRATVGGTAQALRFFTREDASTQQRYTALNA WFTERGLTGDVAGCRWVDDAILINGRRWPMVQMEWVDGHTLDRHVEDLVEADDRAALATLAASWRDLLRRTQAARFAHGD LQHGNVLVDTAGQLRLVDFDSSWIAPFTGSSPPSEGGHRNYQPQNRPWGPWMDTFPGLVIYLSLLALAREPKQWEQLNDG ENLLFRDRDYQPPHRTEVWSWVERLHDPRIDQLSARLRACCAPGWTATGDLEGLISGPVPWWTRTAAHPPAGASPEATTA QPEATTAPLPAVTAPVKVTTATVQGTTAPRQTTGAPPWPPPQPAPPAGQTVWWKQPPGQRPEPGRPAPAQPGPAQSGPAQ SGPAQWAPVRAAGRRLRAVGWYLFAAVAAVATWGLGSALIAATLTGLAPSDEAAISALLALVPALIVLVLLVRRRRRRRR QPPGKAR
Specific function: Unknown
COG id: COG0515
COG function: function code RTKL; Serine/threonine protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53220; Mature: 53088
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQLSAEDYIKAVQRPDLVFNRPELTEARFDVHPMLGIPVPASGSTAVVFRATVGGTAQ CCCCCCHHHHHHHHCCCCCEECCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHH ALRFFTREDASTQQRYTALNAWFTERGLTGDVAGCRWVDDAILINGRRWPMVQMEWVDGH HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEEECCCCCCEEEEEECCCC TLDRHVEDLVEADDRAALATLAASWRDLLRRTQAARFAHGDLQHGNVLVDTAGQLRLVDF CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEC DSSWIAPFTGSSPPSEGGHRNYQPQNRPWGPWMDTFPGLVIYLSLLALAREPKQWEQLND CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCC GENLLFRDRDYQPPHRTEVWSWVERLHDPRIDQLSARLRACCAPGWTATGDLEGLISGPV CCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCC PWWTRTAAHPPAGASPEATTAQPEATTAPLPAVTAPVKVTTATVQGTTAPRQTTGAPPWP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC PPQPAPPAGQTVWWKQPPGQRPEPGRPAPAQPGPAQSGPAQSGPAQWAPVRAAGRRLRAV CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH GWYLFAAVAAVATWGLGSALIAATLTGLAPSDEAAISALLALVPALIVLVLLVRRRRRRR HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQPPGKAR CCCCCCCC >Mature Secondary Structure SDQLSAEDYIKAVQRPDLVFNRPELTEARFDVHPMLGIPVPASGSTAVVFRATVGGTAQ CCCCCHHHHHHHHCCCCCEECCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHH ALRFFTREDASTQQRYTALNAWFTERGLTGDVAGCRWVDDAILINGRRWPMVQMEWVDGH HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEEECCCCCCEEEEEECCCC TLDRHVEDLVEADDRAALATLAASWRDLLRRTQAARFAHGDLQHGNVLVDTAGQLRLVDF CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEC DSSWIAPFTGSSPPSEGGHRNYQPQNRPWGPWMDTFPGLVIYLSLLALAREPKQWEQLND CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCC GENLLFRDRDYQPPHRTEVWSWVERLHDPRIDQLSARLRACCAPGWTATGDLEGLISGPV CCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCC PWWTRTAAHPPAGASPEATTAQPEATTAPLPAVTAPVKVTTATVQGTTAPRQTTGAPPWP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC PPQPAPPAGQTVWWKQPPGQRPEPGRPAPAQPGPAQSGPAQSGPAQWAPVRAAGRRLRAV CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH GWYLFAAVAAVATWGLGSALIAATLTGLAPSDEAAISALLALVPALIVLVLLVRRRRRRR HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQPPGKAR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA