| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318375
Identifier: 158318375
GI number: 158318375
Start: 8070188
End: 8071159
Strand: Reverse
Name: 158318375
Synonym: Franean1_6640
Alternate gene names: NA
Gene position: 8071159-8070188 (Counterclockwise)
Preceding gene: 158318376
Following gene: 158318374
Centisome position: 89.86
GC content: 71.71
Gene sequence:
>972_bases GTGCCGCTGACCAGAGTCAGGGAACTGGCCGACCACTGGCGCCACCGTTACGACTGGCGTGCGGCGGAAGCCGAGCTGAA CAGTCATCCGCAGTTCGTCACCGAGATCGACGGCCAGCGGATCCACTTCCTCCACGTGCGCAGCCCGCGGCCGGACGCGC TCCCACTGGTGCTGACCCACGGCTGGCCGGGGTCCATCGTGGAGTTTCTCGATGTGATCGGGCCGCTTTCGGCGGACTTC CACCTGGTCGTCCCGTCGATTCCAGGGTGGGGCTTCTCCGGCCCGACGCGCGAGCGCGGCTGGGATGTCGATCGGGTGGC ACGTGCCTGGGCGGAGCTGATGCGTGGCCTGGGATACCGCCGGTACGGCGCGCAGGGCGGTGACTGGGGGGCGTCGGTGT CCCGGGCCCTGTCGCAGCACGACGCCGACCACGTCGTCGGAATACACCTCAACTATCTTCCGACACCGCGGCTGCCGGGC GACCCGGACCGCACCCGGCTGACACCGGGGGACCAGGAGCGGCTCGCCCAGACCGAGGCCTACCTGCGCGACCAGCCGGC GGTTCGGCTGGTCAACGGCACCCGGCCGCAGACCCCGGCGTACGCCCTCAACGACTCGCCGGTCGGGCTGCTCGCCTGGC TGCTCGACCCGATGACGATGTGGGCGGCCCGGGACTTCCCGATCAGTCCCGACCGGGTGATCACGAACGTGACGCTGTTC TGGTTGACCGGCACCGCCGGGACGGCGCCGCGCCTGCACCGGGAGACCGGCGGCCCGCGGTCGTGGCGGACCGTCCAACC GGTGGGCGTCCTCGTCCTGCCCGAGGACATCACCCGCCCGATCCGGCCGTATGCCGAGCGGCGGATGCCGATCGCCCGGT GGACGGAGGCCGACCGTGGCGGTCACTTCGCGGGACTTGAGGTGCCCGAGCTGCTCGCCGCCGACATCCGCGCGTTCTTC CAGGGCCGGTGA
Upstream 100 bases:
>100_bases CCGTGCCGCGGCCGAGGAGCCGGCTGGCCAGTGACCGCACGCACGCCTCGACCGCACCCGCTGGCCCGACGAACTACCGG GCGTCGGAGACGAGTTCGGC
Downstream 100 bases:
>100_bases GGCCGATAGCATCAGCGGATCGCGCGACCACCAATTGGGGAAGCCGGGGCACCGTGACCGTCATCAAGATCAATGCCATC ACCGTCGAGCCCGACAGCGG
Product: epocide hydrolase domain-containing protein
Products: NA
Alternate protein names: Epoxide hydratase [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MPLTRVRELADHWRHRYDWRAAEAELNSHPQFVTEIDGQRIHFLHVRSPRPDALPLVLTHGWPGSIVEFLDVIGPLSADF HLVVPSIPGWGFSGPTRERGWDVDRVARAWAELMRGLGYRRYGAQGGDWGASVSRALSQHDADHVVGIHLNYLPTPRLPG DPDRTRLTPGDQERLAQTEAYLRDQPAVRLVNGTRPQTPAYALNDSPVGLLAWLLDPMTMWAARDFPISPDRVITNVTLF WLTGTAGTAPRLHRETGGPRSWRTVQPVGVLVLPEDITRPIRPYAERRMPIARWTEADRGGHFAGLEVPELLAADIRAFF QGR
Sequences:
>Translated_323_residues MPLTRVRELADHWRHRYDWRAAEAELNSHPQFVTEIDGQRIHFLHVRSPRPDALPLVLTHGWPGSIVEFLDVIGPLSADF HLVVPSIPGWGFSGPTRERGWDVDRVARAWAELMRGLGYRRYGAQGGDWGASVSRALSQHDADHVVGIHLNYLPTPRLPG DPDRTRLTPGDQERLAQTEAYLRDQPAVRLVNGTRPQTPAYALNDSPVGLLAWLLDPMTMWAARDFPISPDRVITNVTLF WLTGTAGTAPRLHRETGGPRSWRTVQPVGVLVLPEDITRPIRPYAERRMPIARWTEADRGGHFAGLEVPELLAADIRAFF QGR >Mature_322_residues PLTRVRELADHWRHRYDWRAAEAELNSHPQFVTEIDGQRIHFLHVRSPRPDALPLVLTHGWPGSIVEFLDVIGPLSADFH LVVPSIPGWGFSGPTRERGWDVDRVARAWAELMRGLGYRRYGAQGGDWGASVSRALSQHDADHVVGIHLNYLPTPRLPGD PDRTRLTPGDQERLAQTEAYLRDQPAVRLVNGTRPQTPAYALNDSPVGLLAWLLDPMTMWAARDFPISPDRVITNVTLFW LTGTAGTAPRLHRETGGPRSWRTVQPVGVLVLPEDITRPIRPYAERRMPIARWTEADRGGHFAGLEVPELLAADIRAFFQ GR
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
Organism=Homo sapiens, GI4503583, Length=361, Percent_Identity=33.5180055401662, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI209862837, Length=361, Percent_Identity=33.5180055401662, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17564944, Length=365, Percent_Identity=30.4109589041096, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI193207462, Length=355, Percent_Identity=25.3521126760563, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI20130139, Length=368, Percent_Identity=28.2608695652174, Blast_Score=145, Evalue=4e-35, Organism=Drosophila melanogaster, GI19922580, Length=363, Percent_Identity=26.7217630853994, Blast_Score=134, Evalue=8e-32, Organism=Drosophila melanogaster, GI24655327, Length=366, Percent_Identity=25.6830601092896, Blast_Score=131, Evalue=6e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =3.3.2.10 [H]
Molecular weight: Translated: 36351; Mature: 36219
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTRVRELADHWRHRYDWRAAEAELNSHPQFVTEIDGQRIHFLHVRSPRPDALPLVLTH CCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCCCEEEEEEECCCCCCCCEEEEEC GWPGSIVEFLDVIGPLSADFHLVVPSIPGWGFSGPTRERGWDVDRVARAWAELMRGLGYR CCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC RYGAQGGDWGASVSRALSQHDADHVVGIHLNYLPTPRLPGDPDRTRLTPGDQERLAQTEA CCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH YLRDQPAVRLVNGTRPQTPAYALNDSPVGLLAWLLDPMTMWAARDFPISPDRVITNVTLF HHCCCCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEEE WLTGTAGTAPRLHRETGGPRSWRTVQPVGVLVLPEDITRPIRPYAERRMPIARWTEADRG EEECCCCCCCHHHHCCCCCCCCCEECCEEEEEECHHHCCCHHHHHHHCCCHHHCCCCCCC GHFAGLEVPELLAADIRAFFQGR CCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure PLTRVRELADHWRHRYDWRAAEAELNSHPQFVTEIDGQRIHFLHVRSPRPDALPLVLTH CHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCCCEEEEEEECCCCCCCCEEEEEC GWPGSIVEFLDVIGPLSADFHLVVPSIPGWGFSGPTRERGWDVDRVARAWAELMRGLGYR CCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC RYGAQGGDWGASVSRALSQHDADHVVGIHLNYLPTPRLPGDPDRTRLTPGDQERLAQTEA CCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH YLRDQPAVRLVNGTRPQTPAYALNDSPVGLLAWLLDPMTMWAARDFPISPDRVITNVTLF HHCCCCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEEE WLTGTAGTAPRLHRETGGPRSWRTVQPVGVLVLPEDITRPIRPYAERRMPIARWTEADRG EEECCCCCCCHHHHCCCCCCCCCEECCEEEEEECHHHCCCHHHHHHHCCCHHHCCCCCCC GHFAGLEVPELLAADIRAFFQGR CCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226695 [H]