| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yyaP [H]
Identifier: 158318352
GI number: 158318352
Start: 8051792
End: 8052358
Strand: Reverse
Name: yyaP [H]
Synonym: Franean1_6617
Alternate gene names: 158318352
Gene position: 8052358-8051792 (Counterclockwise)
Preceding gene: 158318353
Following gene: 158318349
Centisome position: 89.65
GC content: 67.2
Gene sequence:
>567_bases ATGAGACCGCTCCGATACTCGATCAACGTCACCCTCGACGGCTGCTGCGACCACCGGGCGGTGATCCCGGACGAGGAGCT GCATCGCCATCACGCCGCCAACCTGGAACGAGCCGACGCCCTGCTCTTTGGCCGGGTGACCTACCAGATGATGGAGGAGG CGTGGCGGCAGTCGGCGACGGGAACATGGCCCGACTGGATGGCTGGCTGGATGATCCCCTTTGCTCAGACGATCGACAGG GCAAAGAAGTACGTCGTGTCGAGCACCCTGGACCGGGTCGACTGGAACGCGGAACTCGTGCAGGGCGACCTGGGGAAGGC CGTCGAGCAGCTCAAGCAGGAGCCTGGCGGAGCCCTGGCCGTGGGAGGCGTGACCCTCCCGCTGGCCTTGGCGGACCTGG GATTGATCGATGAGTACGAGTTCGTCGTGCAGCCCGTCGTGGCGGGCCACGGGCCGACGTTGTTCGCCGGCCTCAGCGAG CGGCTCGAGCTGAAGCTCGTGGGACGCCAGGAGTTCCGGTCAGGGGCGGTCGCTCTGCGGTACGAGCCCAGCCGAGTCAC GGCCTGA
Upstream 100 bases:
>100_bases TCCCAGCAGGTCCGGCCGCGGGACCGATGAGAAATGGCGGCGCCGACGGTCTGACTATCGTCCGCCAGGTGCCTGCGACC GTGGCAAGGGAGAACAACCT
Downstream 100 bases:
>100_bases AGGCCGCGTCGCCGAGGTAACGGTCGCCGGTCGTCGTCAGGATCACGCTGTCCGCGCCGAGCGCGTCCAGCGCGTAGGTG ACGTGCTGGATCGCCAGCTC
Product: deaminase-reductase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MRPLRYSINVTLDGCCDHRAVIPDEELHRHHAANLERADALLFGRVTYQMMEEAWRQSATGTWPDWMAGWMIPFAQTIDR AKKYVVSSTLDRVDWNAELVQGDLGKAVEQLKQEPGGALAVGGVTLPLALADLGLIDEYEFVVQPVVAGHGPTLFAGLSE RLELKLVGRQEFRSGAVALRYEPSRVTA
Sequences:
>Translated_188_residues MRPLRYSINVTLDGCCDHRAVIPDEELHRHHAANLERADALLFGRVTYQMMEEAWRQSATGTWPDWMAGWMIPFAQTIDR AKKYVVSSTLDRVDWNAELVQGDLGKAVEQLKQEPGGALAVGGVTLPLALADLGLIDEYEFVVQPVVAGHGPTLFAGLSE RLELKLVGRQEFRSGAVALRYEPSRVTA >Mature_188_residues MRPLRYSINVTLDGCCDHRAVIPDEELHRHHAANLERADALLFGRVTYQMMEEAWRQSATGTWPDWMAGWMIPFAQTIDR AKKYVVSSTLDRVDWNAELVQGDLGKAVEQLKQEPGGALAVGGVTLPLALADLGLIDEYEFVVQPVVAGHGPTLFAGLSE RLELKLVGRQEFRSGAVALRYEPSRVTA
Specific function: Unknown
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ywjB [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002734 [H]
Pfam domain/function: PF01872 RibD_C [H]
EC number: NA
Molecular weight: Translated: 20857; Mature: 20857
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPLRYSINVTLDGCCDHRAVIPDEELHRHHAANLERADALLFGRVTYQMMEEAWRQSAT CCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC GTWPDWMAGWMIPFAQTIDRAKKYVVSSTLDRVDWNAELVQGDLGKAVEQLKQEPGGALA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEE VGGVTLPLALADLGLIDEYEFVVQPVVAGHGPTLFAGLSERLELKLVGRQEFRSGAVALR ECCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCHHHCEEEEEECHHHHCCCCEEEE YEPSRVTA ECCCCCCC >Mature Secondary Structure MRPLRYSINVTLDGCCDHRAVIPDEELHRHHAANLERADALLFGRVTYQMMEEAWRQSAT CCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC GTWPDWMAGWMIPFAQTIDRAKKYVVSSTLDRVDWNAELVQGDLGKAVEQLKQEPGGALA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEE VGGVTLPLALADLGLIDEYEFVVQPVVAGHGPTLFAGLSERLELKLVGRQEFRSGAVALR ECCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCHHHCEEEEEECHHHHCCCCEEEE YEPSRVTA ECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]