| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318346
Identifier: 158318346
GI number: 158318346
Start: 8045174
End: 8045311
Strand: Reverse
Name: 158318346
Synonym: Franean1_6611
Alternate gene names: NA
Gene position: 8045311-8045174 (Counterclockwise)
Preceding gene: 158318347
Following gene: 158318344
Centisome position: 89.57
GC content: 60.14
Gene sequence:
>138_bases GTGGAACTGCACCTGAGCCAGATCGCCGAGGCGGATGATCTGCTGACCAATGACCCGCTTGCCCTCCTTATCGGCATGGT GCTGGACCAGCGGGTTTCGGAAAGATGGAGTGGGACAGCACGTTCCGTGTGCGCTTGA
Upstream 100 bases:
>100_bases GACGCCGACGACTACGAAGCTTGTCGGGACTACACCGACTACACGGCGATCTGAACGACGGCCCGGTGGCTGCTGCGGAG CGGTCGGCTACGGTGATGCC
Downstream 100 bases:
>100_bases TCCCCTGGCGCAGCGGTTGGATGTCGCGCGTCGCAAACGTCACCGCGTTAGCCTTGAGGATGTACTACGTGGATGCGGAC GATGCACGCGACCGCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 45; Mature: 45
Protein sequence:
>45_residues MELHLSQIAEADDLLTNDPLALLIGMVLDQRVSERWSGTARSVCA
Sequences:
>Translated_45_residues MELHLSQIAEADDLLTNDPLALLIGMVLDQRVSERWSGTARSVCA >Mature_45_residues MELHLSQIAEADDLLTNDPLALLIGMVLDQRVSERWSGTARSVCA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4940; Mature: 4940
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELHLSQIAEADDLLTNDPLALLIGMVLDQRVSERWSGTARSVCA CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCC >Mature Secondary Structure MELHLSQIAEADDLLTNDPLALLIGMVLDQRVSERWSGTARSVCA CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA