| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318326
Identifier: 158318326
GI number: 158318326
Start: 8020067
End: 8021512
Strand: Reverse
Name: 158318326
Synonym: Franean1_6591
Alternate gene names: NA
Gene position: 8021512-8020067 (Counterclockwise)
Preceding gene: 158318327
Following gene: 158318325
Centisome position: 89.31
GC content: 72.75
Gene sequence:
>1446_bases ATGAGCCTCACACTGGAACGGGAACCGGAGCCGGGACTGAAACCGGAACCGGGGGCGGTTCGTGGGCGGTGGTCCGCGCC GGCCCGGCTGCCGGCGCTCGGGGTGCGCGTCGGGCTGGTGACCTGGGGCGTCGTGGTCGTGGCCATGTGGTGGTTCGACA CCTCGGCGTCGAGCCTTCACGGCGGCGGCCTGCTCCTGACGGCGCTCGGACGGGTCGCCGGGCTGCTGGCCGCCTACCTG ATGCTGGTGCAGCTCCTGCTCATGGCGCGGGTGCCGGGGCTCGAACGCGCGGTCGGGTTCGATCGGCTGGCGGCCTGGCA CCGCGGCCTGGGGACGAACGTCGTGCTGCTGATGGCCGTCCACGTCCTGATGGTGGTGTGGGGGTATGGCCTGACCGCGC ATCATCAGCCGCTGTCCGAACTGGTCACGGTGATCATGACCTACCCGGAGATGTGGAAGGCGACCGCGGGCGCGCTGCTG TTCGTCACTGTCGGAGTGGCCAGCGCCCGCGCGCTGCGGCGGCACGTCTCCTATGAGATCTGGTACCTGCTGCATCTGAG CGCCTACGTGGCTGTGCTCCTCGTGTACTCCCATCAGACGGCTACCGGCGCGGACTTCGTCGGGCATCCCGTCAACACGC TGCTGTGGCAGGGGATGTACGTCGCGGTGGCGGCCTGCCTGGTGATCTGGCGTCTGGTCCTGCCGATCGCGGCGGTCGTC CGGCATCGGATGACCGTGGAGCGGGTGGTCGCCGAGGCGCCCGGTGTGGTCTCCGTGTGGATTCGTGGCCGTGACCTGGA TCGTCTCGGCGCCCGGCCGGGGCAGTTCCTGCTCTGGCGGTTCGCCGCCCGGGGGCATGCCGTCACCGCCCACCCGTACT CGCTGTCCGCGCCGGCGCAGCCGCACCGCCTGCGCATCACCGTCAAGGACGCGGGCGACCACTCCCGCGCGATCGCCCAC CTGCGCCCGGGGACGCTGGTCGTCGCGGAGGGTCCGTTCGGGCACTTCACCGCGGAGCGCGCCACCCGGGGCCGGGCGCT GCTCGTCGGTGGCGGCAGCGGCATCGCCCCGATCCGCGCGCTCGCCGAGGATCTCGCCGGCCGCGGCGACGACGTCGTGG TGGTGCACCGCGCGAGCAGGGCGACCGACCTCGCGCTGCGGAGCGAGTTCGACGAGCTGGCCGATCACCGGCTGGCCGCC GGTTGGCCGGCTGCCGATGGGCCGGCCGTCGGTCGGGTGGTGGTCCACCGTGTGGTCGGGTCCCGGCGCGAGCTCGGCCA CGATCCGCTGGCCGCCCGCTATCTCGCCGCCGCCGTGCCGGACGTCGCCGATCGGGACGTCTTCGTCTGCGGGCCCGCCG GCATGACGCTCGCGGTCGTCCGGGCCCTGCGCGAGCTCGGCCTGTCCGAGGAGCAGATCCACACCGAGGAGTTCACGCTG AGATGA
Upstream 100 bases:
>100_bases GGGGTCGGTTCGAGCCGTCCGCGGGGGCGGTGCGACTTCCCGGGAAGCTCTGAGGATTCGCACAGCCGGTTCTCAGGGTC CGGGCACATCGTCCGAGGCT
Downstream 100 bases:
>100_bases ACGAGAACGCGGGCAGGCCCTACCGGGCGCGTCTCGGCTTCGCCGCACTGCTGGGGACGGTTGTCCTCGTCGTCGGGGCG AAGTCGGCGACGGGCATCGG
Product: ferric reductase domain-containing protein
Products: NA
Alternate protein names: Ferric Reductase Domain-Containing Protein; Oxidoreductase Membrane Protein; Ferric Reductase Domain Protein Transmembrane Component; Membrane-Bound Oxidoreductase
Number of amino acids: Translated: 481; Mature: 480
Protein sequence:
>481_residues MSLTLEREPEPGLKPEPGAVRGRWSAPARLPALGVRVGLVTWGVVVVAMWWFDTSASSLHGGGLLLTALGRVAGLLAAYL MLVQLLLMARVPGLERAVGFDRLAAWHRGLGTNVVLLMAVHVLMVVWGYGLTAHHQPLSELVTVIMTYPEMWKATAGALL FVTVGVASARALRRHVSYEIWYLLHLSAYVAVLLVYSHQTATGADFVGHPVNTLLWQGMYVAVAACLVIWRLVLPIAAVV RHRMTVERVVAEAPGVVSVWIRGRDLDRLGARPGQFLLWRFAARGHAVTAHPYSLSAPAQPHRLRITVKDAGDHSRAIAH LRPGTLVVAEGPFGHFTAERATRGRALLVGGGSGIAPIRALAEDLAGRGDDVVVVHRASRATDLALRSEFDELADHRLAA GWPAADGPAVGRVVVHRVVGSRRELGHDPLAARYLAAAVPDVADRDVFVCGPAGMTLAVVRALRELGLSEEQIHTEEFTL R
Sequences:
>Translated_481_residues MSLTLEREPEPGLKPEPGAVRGRWSAPARLPALGVRVGLVTWGVVVVAMWWFDTSASSLHGGGLLLTALGRVAGLLAAYL MLVQLLLMARVPGLERAVGFDRLAAWHRGLGTNVVLLMAVHVLMVVWGYGLTAHHQPLSELVTVIMTYPEMWKATAGALL FVTVGVASARALRRHVSYEIWYLLHLSAYVAVLLVYSHQTATGADFVGHPVNTLLWQGMYVAVAACLVIWRLVLPIAAVV RHRMTVERVVAEAPGVVSVWIRGRDLDRLGARPGQFLLWRFAARGHAVTAHPYSLSAPAQPHRLRITVKDAGDHSRAIAH LRPGTLVVAEGPFGHFTAERATRGRALLVGGGSGIAPIRALAEDLAGRGDDVVVVHRASRATDLALRSEFDELADHRLAA GWPAADGPAVGRVVVHRVVGSRRELGHDPLAARYLAAAVPDVADRDVFVCGPAGMTLAVVRALRELGLSEEQIHTEEFTL R >Mature_480_residues SLTLEREPEPGLKPEPGAVRGRWSAPARLPALGVRVGLVTWGVVVVAMWWFDTSASSLHGGGLLLTALGRVAGLLAAYLM LVQLLLMARVPGLERAVGFDRLAAWHRGLGTNVVLLMAVHVLMVVWGYGLTAHHQPLSELVTVIMTYPEMWKATAGALLF VTVGVASARALRRHVSYEIWYLLHLSAYVAVLLVYSHQTATGADFVGHPVNTLLWQGMYVAVAACLVIWRLVLPIAAVVR HRMTVERVVAEAPGVVSVWIRGRDLDRLGARPGQFLLWRFAARGHAVTAHPYSLSAPAQPHRLRITVKDAGDHSRAIAHL RPGTLVVAEGPFGHFTAERATRGRALLVGGGSGIAPIRALAEDLAGRGDDVVVVHRASRATDLALRSEFDELADHRLAAG WPAADGPAVGRVVVHRVVGSRRELGHDPLAARYLAAAVPDVADRDVFVCGPAGMTLAVVRALRELGLSEEQIHTEEFTLR
Specific function: Unknown
COG id: COG4097
COG function: function code P; Predicted ferric reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51900; Mature: 51769
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTLEREPEPGLKPEPGAVRGRWSAPARLPALGVRVGLVTWGVVVVAMWWFDTSASSLH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GGGLLLTALGRVAGLLAAYLMLVQLLLMARVPGLERAVGFDRLAAWHRGLGTNVVLLMAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH HVLMVVWGYGLTAHHQPLSELVTVIMTYPEMWKATAGALLFVTVGVASARALRRHVSYEI HHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHH WYLLHLSAYVAVLLVYSHQTATGADFVGHPVNTLLWQGMYVAVAACLVIWRLVLPIAAVV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHRMTVERVVAEAPGVVSVWIRGRDLDRLGARPGQFLLWRFAARGHAVTAHPYSLSAPAQ HHHHHHHHHHHCCCCEEEEEEECCCHHHHCCCCCHHHHHHHHCCCCEEEECCCCCCCCCC PHRLRITVKDAGDHSRAIAHLRPGTLVVAEGPFGHFTAERATRGRALLVGGGSGIAPIRA CCEEEEEEECCCCCHHHHEEECCCEEEEECCCCCCCHHHHCCCCCEEEEECCCCCHHHHH LAEDLAGRGDDVVVVHRASRATDLALRSEFDELADHRLAAGWPAADGPAVGRVVVHRVVG HHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH SRRELGHDPLAARYLAAAVPDVADRDVFVCGPAGMTLAVVRALRELGLSEEQIHTEEFTL HHHHCCCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHCCHHCCC R C >Mature Secondary Structure SLTLEREPEPGLKPEPGAVRGRWSAPARLPALGVRVGLVTWGVVVVAMWWFDTSASSLH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GGGLLLTALGRVAGLLAAYLMLVQLLLMARVPGLERAVGFDRLAAWHRGLGTNVVLLMAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH HVLMVVWGYGLTAHHQPLSELVTVIMTYPEMWKATAGALLFVTVGVASARALRRHVSYEI HHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHH WYLLHLSAYVAVLLVYSHQTATGADFVGHPVNTLLWQGMYVAVAACLVIWRLVLPIAAVV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHRMTVERVVAEAPGVVSVWIRGRDLDRLGARPGQFLLWRFAARGHAVTAHPYSLSAPAQ HHHHHHHHHHHCCCCEEEEEEECCCHHHHCCCCCHHHHHHHHCCCCEEEECCCCCCCCCC PHRLRITVKDAGDHSRAIAHLRPGTLVVAEGPFGHFTAERATRGRALLVGGGSGIAPIRA CCEEEEEEECCCCCHHHHEEECCCEEEEECCCCCCCHHHHCCCCCEEEEECCCCCHHHHH LAEDLAGRGDDVVVVHRASRATDLALRSEFDELADHRLAAGWPAADGPAVGRVVVHRVVG HHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH SRRELGHDPLAARYLAAAVPDVADRDVFVCGPAGMTLAVVRALRELGLSEEQIHTEEFTL HHHHCCCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHCCHHCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA