| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318325
Identifier: 158318325
GI number: 158318325
Start: 8019588
End: 8020070
Strand: Reverse
Name: 158318325
Synonym: Franean1_6590
Alternate gene names: NA
Gene position: 8020070-8019588 (Counterclockwise)
Preceding gene: 158318326
Following gene: 158318324
Centisome position: 89.29
GC content: 71.01
Gene sequence:
>483_bases ATGAACGAGAACGCGGGCAGGCCCTACCGGGCGCGTCTCGGCTTCGCCGCACTGCTGGGGACGGTTGTCCTCGTCGTCGG GGCGAAGTCGGCGACGGGCATCGGCGCGCATCCCTCCACCCTCGCCGTGACACCGGCGACGACCAGCACCAGCACCAGCA CGGGAACGGGTTCGGGTACCGGCACGGGTTCGACGAGCGGGACCACCACGCGGACGGTGACCGGCGACGCCGTCGACACT CGGTACGGCCTCGTGCAGGTCCAGGTCGTCCTCACCGGCAGCAAGATCACCGATGTGGTGACGGTGCAGCTGCCGGACCG GGAGCGGCGCGACCGGGAGATCAACGACCAGGCCGTGCCCCTGCTGCGCCAGGAGGTGCTCGACGTCCAGAGCGCCCAGA TCGACGTCGTCTCCGGCGCGTCCTACACCAGCCAGGGGTACGCCCAGTCCGTCCAGTCGGCCCTGGACGCCGCCGGTGTC TAG
Upstream 100 bases:
>100_bases TCGTCTGCGGGCCCGCCGGCATGACGCTCGCGGTCGTCCGGGCCCTGCGCGAGCTCGGCCTGTCCGAGGAGCAGATCCAC ACCGAGGAGTTCACGCTGAG
Downstream 100 bases:
>100_bases GGCCGGCGCCGGCCAGGACGCGCGCCCGTCGCGCCCGTTGCACCCGTCGCGCCCGTCGCGACCGGGGCGCAGCCACGCCG AACCGGTGATGGGCACGGTT
Product: FMN-binding domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MNENAGRPYRARLGFAALLGTVVLVVGAKSATGIGAHPSTLAVTPATTSTSTSTGTGSGTGTGSTSGTTTRTVTGDAVDT RYGLVQVQVVLTGSKITDVVTVQLPDRERRDREINDQAVPLLRQEVLDVQSAQIDVVSGASYTSQGYAQSVQSALDAAGV
Sequences:
>Translated_160_residues MNENAGRPYRARLGFAALLGTVVLVVGAKSATGIGAHPSTLAVTPATTSTSTSTGTGSGTGTGSTSGTTTRTVTGDAVDT RYGLVQVQVVLTGSKITDVVTVQLPDRERRDREINDQAVPLLRQEVLDVQSAQIDVVSGASYTSQGYAQSVQSALDAAGV >Mature_160_residues MNENAGRPYRARLGFAALLGTVVLVVGAKSATGIGAHPSTLAVTPATTSTSTSTGTGSGTGTGSTSGTTTRTVTGDAVDT RYGLVQVQVVLTGSKITDVVTVQLPDRERRDREINDQAVPLLRQEVLDVQSAQIDVVSGASYTSQGYAQSVQSALDAAGV
Specific function: Unknown
COG id: COG3976
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16325; Mature: 16325
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENAGRPYRARLGFAALLGTVVLVVGAKSATGIGAHPSTLAVTPATTSTSTSTGTGSGT CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC GTGSTSGTTTRTVTGDAVDTRYGLVQVQVVLTGSKITDVVTVQLPDRERRDREINDQAVP CCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCCEEEEEEEEECCCHHHCCCCCCHHHH LLRQEVLDVQSAQIDVVSGASYTSQGYAQSVQSALDAAGV HHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MNENAGRPYRARLGFAALLGTVVLVVGAKSATGIGAHPSTLAVTPATTSTSTSTGTGSGT CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC GTGSTSGTTTRTVTGDAVDTRYGLVQVQVVLTGSKITDVVTVQLPDRERRDREINDQAVP CCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCCEEEEEEEEECCCHHHCCCCCCHHHH LLRQEVLDVQSAQIDVVSGASYTSQGYAQSVQSALDAAGV HHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA