| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318317
Identifier: 158318317
GI number: 158318317
Start: 8007963
End: 8009258
Strand: Direct
Name: 158318317
Synonym: Franean1_6582
Alternate gene names: NA
Gene position: 8007963-8009258 (Clockwise)
Preceding gene: 158318316
Following gene: 158318318
Centisome position: 89.16
GC content: 77.55
Gene sequence:
>1296_bases ATGACGACCGCGGCCCTTCTCGCCCTGTTCGCGGGCGCGCTGGCCTGGCCGGTTCCGCGCCTGCTGGCCGCCGCGCGGTG GCCGCACCGCTGCCCGCGCGCGGCGATCGTGCTGTGGCAGGCGATAGGCCTCGCGGGTGGGGTCTCAGCCCTGCTGGCCG CCGCGGCCTTCACTGTGGCTCCGTTGTCGCAGGGCATCCCGTCGGCGCTCGCCGACCACGCCTCCAACCTTCTCGCCGGT GAGCCCCTGGTCGGGCTCGGCCGGACGAACCTCGTCGGGCTGGCCATCGCGGCGGCGCTGGCGGCACGCCTGTTCGGCGT GCTGGCCATGTCGACCGCGGCGACCCTGCGCGAGCGCCACCGGCACCGGCACCTCGTCGACCTCGCCGGCCACCGCCACC GGCACCGCGGGCACGACCACGGTGACCCCGAGCACCCCGACAGCCTGGGCGGCTCGGGCGGCTCGGGCGGCTCGGGCGGC TCGGGCGGCTCGGGCGGCTCCGGAGGCTCGGGCGACGTCGCCGGGCACGAGGAGCACGGCACCGGCTGCCGCCTGTGCGA GCACCGGGACAGGGCCGGGACCCGGCTGCGGATCCTGGACCATCCCGTCGCCGTCGCCTACTGCGTCCCCGGGGTGCGCC ATGCGCGGGTCGTCGTCTCCGCCGGCCTGCTGCGGACGCTGACCCCCGAGGAGCTGGACGCCGTCCTCGCCCACGAGGAG GCGCACGTCAGCGGCCGGCACGACCTGGTCATCCAGCCGTTCGTCGCCTGGGAGCGCACCTTCCCCTTCCTGCGCCCGGC CCGCGAGGCGACGGCCGCCGTCTCGCTGCTGGTCGAGATGCTCGCGGACGACGCCGCCGCCCGGCGCACCTGCGGCCGGA CCCTCGCCCGGGCGCTCGCCCGGCTCGGCGTCACCCGCGCAGCGGTGCCCGCCGGAACACTGAGCGTGACGGGCCCGGAC CTCCCCAGCCAGCGACCACCCACGACGGGCGCCTCACCCTCCGCGCCGGCGAACGGGTCGGTCCCACCCTTCGAGCCGGC GAGACTCGGGCCGGCAAGCACGCCGGAGTCACCCGCCGTACTCGGAGTCGCCGGCGCGGGTCGGCTGGCGGCCGTCGCCG CCGCGGTCGCCACGGACCGCTCCGACCCGGCGCGTAACGGGGGCGTGCGGACGCCGGTCGTCGCCCGGATTGCCCGGCTG CTCGACCCGCCGGCCGTCCCGATCTGGCTGCCCGGGACCGCCTACCTCACCGCCGCGATGGTGTTCCTCACCCCGGTGGT CCTGCTCCTCACCTGA
Upstream 100 bases:
>100_bases GTGACGACCACTCCGGCCAGCACATCCGGAGAATCACGGATCGCGACCGAGGCGCGACCGGTACAACTCCCGGCGGACGA GCGGTAGCGTCTGCCGGGAC
Downstream 100 bases:
>100_bases GCTTTCCGTTCACCTGAGCTTTCCGGCGACCCTGGTGCCACAGAAGCGCGCACAGTCGGCAGACTGGACATGTGCGCCGG CAGGGCAGCAGCCCGCTCGC
Product: peptidase M48 Ste24p
Products: NA
Alternate protein names: Integral Membrane Protein; Zn-Dependent Protease With Chaperone Function; M48 Family Peptidase; Peptidase M; Membrane-Bound Protease; Metallopeptidase; Heat Shock Protein
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MTTAALLALFAGALAWPVPRLLAAARWPHRCPRAAIVLWQAIGLAGGVSALLAAAAFTVAPLSQGIPSALADHASNLLAG EPLVGLGRTNLVGLAIAAALAARLFGVLAMSTAATLRERHRHRHLVDLAGHRHRHRGHDHGDPEHPDSLGGSGGSGGSGG SGGSGGSGGSGDVAGHEEHGTGCRLCEHRDRAGTRLRILDHPVAVAYCVPGVRHARVVVSAGLLRTLTPEELDAVLAHEE AHVSGRHDLVIQPFVAWERTFPFLRPAREATAAVSLLVEMLADDAAARRTCGRTLARALARLGVTRAAVPAGTLSVTGPD LPSQRPPTTGASPSAPANGSVPPFEPARLGPASTPESPAVLGVAGAGRLAAVAAAVATDRSDPARNGGVRTPVVARIARL LDPPAVPIWLPGTAYLTAAMVFLTPVVLLLT
Sequences:
>Translated_431_residues MTTAALLALFAGALAWPVPRLLAAARWPHRCPRAAIVLWQAIGLAGGVSALLAAAAFTVAPLSQGIPSALADHASNLLAG EPLVGLGRTNLVGLAIAAALAARLFGVLAMSTAATLRERHRHRHLVDLAGHRHRHRGHDHGDPEHPDSLGGSGGSGGSGG SGGSGGSGGSGDVAGHEEHGTGCRLCEHRDRAGTRLRILDHPVAVAYCVPGVRHARVVVSAGLLRTLTPEELDAVLAHEE AHVSGRHDLVIQPFVAWERTFPFLRPAREATAAVSLLVEMLADDAAARRTCGRTLARALARLGVTRAAVPAGTLSVTGPD LPSQRPPTTGASPSAPANGSVPPFEPARLGPASTPESPAVLGVAGAGRLAAVAAAVATDRSDPARNGGVRTPVVARIARL LDPPAVPIWLPGTAYLTAAMVFLTPVVLLLT >Mature_430_residues TTAALLALFAGALAWPVPRLLAAARWPHRCPRAAIVLWQAIGLAGGVSALLAAAAFTVAPLSQGIPSALADHASNLLAGE PLVGLGRTNLVGLAIAAALAARLFGVLAMSTAATLRERHRHRHLVDLAGHRHRHRGHDHGDPEHPDSLGGSGGSGGSGGS GGSGGSGGSGDVAGHEEHGTGCRLCEHRDRAGTRLRILDHPVAVAYCVPGVRHARVVVSAGLLRTLTPEELDAVLAHEEA HVSGRHDLVIQPFVAWERTFPFLRPAREATAAVSLLVEMLADDAAARRTCGRTLARALARLGVTRAAVPAGTLSVTGPDL PSQRPPTTGASPSAPANGSVPPFEPARLGPASTPESPAVLGVAGAGRLAAVAAAVATDRSDPARNGGVRTPVVARIARLL DPPAVPIWLPGTAYLTAAMVFLTPVVLLLT
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44022; Mature: 43891
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAALLALFAGALAWPVPRLLAAARWPHRCPRAAIVLWQAIGLAGGVSALLAAAAFTVA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLSQGIPSALADHASNLLAGEPLVGLGRTNLVGLAIAAALAARLFGVLAMSTAATLRERH HHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHRHLVDLAGHRHRHRGHDHGDPEHPDSLGGSGGSGGSGGSGGSGGSGGSGDVAGHEEHG HHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGCRLCEHRDRAGTRLRILDHPVAVAYCVPGVRHARVVVSAGLLRTLTPEELDAVLAHEE CCHHHHHHHCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH AHVSGRHDLVIQPFVAWERTFPFLRPAREATAAVSLLVEMLADDAAARRTCGRTLARALA HHCCCCCCEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGVTRAAVPAGTLSVTGPDLPSQRPPTTGASPSAPANGSVPPFEPARLGPASTPESPAV HHCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE LGVAGAGRLAAVAAAVATDRSDPARNGGVRTPVVARIARLLDPPAVPIWLPGTAYLTAAM EEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHH VFLTPVVLLLT HHHHHHHHHCC >Mature Secondary Structure TTAALLALFAGALAWPVPRLLAAARWPHRCPRAAIVLWQAIGLAGGVSALLAAAAFTVA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLSQGIPSALADHASNLLAGEPLVGLGRTNLVGLAIAAALAARLFGVLAMSTAATLRERH HHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHRHLVDLAGHRHRHRGHDHGDPEHPDSLGGSGGSGGSGGSGGSGGSGGSGDVAGHEEHG HHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGCRLCEHRDRAGTRLRILDHPVAVAYCVPGVRHARVVVSAGLLRTLTPEELDAVLAHEE CCHHHHHHHCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH AHVSGRHDLVIQPFVAWERTFPFLRPAREATAAVSLLVEMLADDAAARRTCGRTLARALA HHCCCCCCEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGVTRAAVPAGTLSVTGPDLPSQRPPTTGASPSAPANGSVPPFEPARLGPASTPESPAV HHCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE LGVAGAGRLAAVAAAVATDRSDPARNGGVRTPVVARIARLLDPPAVPIWLPGTAYLTAAM EEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHH VFLTPVVLLLT HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA