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The map label for this gene is wzxC [H]

Identifier: 158318288

GI number: 158318288

Start: 7969907

End: 7971361

Strand: Reverse

Name: wzxC [H]

Synonym: Franean1_6553

Alternate gene names: 158318288

Gene position: 7971361-7969907 (Counterclockwise)

Preceding gene: 158318289

Following gene: 158318287

Centisome position: 88.75

GC content: 63.78

Gene sequence:

>1455_bases
ATGGTGCGCGGCGCCCGGTGGATGACGGTGGACCAGATCACCGTCCAGGTCTCCCGTCTCCTGGTCCAGATTGTCCTTGC
CCGGCTACTCGAACCGCGGGCATTCGGGTTGATGACGATGGCTCTGGTCGTCGTGATGTTCCTCGAGATCATGCGCGGTT
TCGGGACCGGTATGGCGATAGTGCAACGCGCCGAGATCAACCAGCGCCTACTCAACAGCGTCTTCTTTCTCAACATCGGG
CTCGGTGTCGCGGTCTCGGTGTTCCTGGCATTGCTGGCACCGGGCGTGTCGGCACTGTACGGCGACGCCGCGCTGACGCC
GGTGCTCCAGGTTCTCGGCCTCGGCCTGCTGTTCGCCAGTATCGGCGACCTGCAACAGTGGCTGCTGCGCCGGGAGATGA
AGTTCGGTGCGGTTGCCGCGGCTGACATCATCGGTACGACTGTCAATGGTGTCTGCTCGATCCTGCTCGGCGTGCTGGGT
TTCCAGGTGTGGTCGCTGGTCGTCGGCTACGTGGTCGGCTTCGGAGTCACCTCGCTGGTCGCGTGGATGCTGTCGCCATG
GCGTCCACAGGCGTCATTCAGCCTGTCCGACCTGCGATCTCTGCTGGGATTCAGCGCCAACCTGAGCGCTTTCCGCATTT
TCAATTTCCTACTGCTGCACGGCGACAAAGTAATCGTCGGCCGTTTCCTCGGGGCCGCTTCGCTGGGTTTCTACGGGCTG
GGGCAGCGGGTGCTGATGTATCCGGTCAGCTCGGTCTCCACTGCACTTCAGGAAGTCATGTTCGCTGGCCTGTCCCGACT
CCAGCATGACCATGCCGCGATCCGCCGGGTCTATTTCCGGTCGTGTGCGGTGACCGCGTTGGTCTGTTTTCCGGTCATGG
CCGGGCTGGCGGTCGTAGCGCCGGATCTCGTCATGGTAGCACTCGGCGAGCGTTGGGAGCCGATGGTCACACTCATCCGG
ATACTCGCGCCGATCGGAGGCATCCAGTCGGTGAGTTTCGGCGTCGGTGTCCTCTATAACGCCACCGGGCGTACCGACCT
GCTGCTGCGCTGGGGAATGGTCTCCGGACCGTTGATGATCGCCAGCTATTTCGCCGGCCTTCCGTGGGGCATCAACGGTG
TGGCTGCGGCCTACGCTATTATGATCGTGCTGCTGCTGCCACCTGGTTTCGCGATTCCCTTCCGGCTGGTGGACGCCAGG
CTGCGGGAGTTGGTTGCAGCGATCTGGCCACACCTCATGGCGACCGGGGTGACCGTGGCCGCCATGACCGCCGTCCAGTG
GTTGAGCCATGGAATGGATCTGCCCCGCCCGATCTGCCTGACATCCAGCGTCCTGGCGGGCGCCGCGAGCTACGTCGGTG
TCACCTGGATACAACGCCCACCCGCATTGGCGGACCTGCTGATGTTCGTGCGGCGAGGCGAACCCCGTGTCGGGACGGCC
GACCAGGTCGCGTAA

Upstream 100 bases:

>100_bases
CGCCGCAGGCGCTGGCCGCGACGGGCCGGTCATGACGGAGTCGACAGTGCCGACGCGGGCTGTGACCGGGCCCGCCGCTT
CGGGTCGCAATCGGGGCGCA

Downstream 100 bases:

>100_bases
TCGAGCGGGGTCCGCCCGGGCGTGACGACATCGGGGCCGAAGCCAGAGCGAAGGCGAGCAGGTCGTCGTTCGTACCGCTA
CCGAATGAAACGAGGTCGAG

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MVRGARWMTVDQITVQVSRLLVQIVLARLLEPRAFGLMTMALVVVMFLEIMRGFGTGMAIVQRAEINQRLLNSVFFLNIG
LGVAVSVFLALLAPGVSALYGDAALTPVLQVLGLGLLFASIGDLQQWLLRREMKFGAVAAADIIGTTVNGVCSILLGVLG
FQVWSLVVGYVVGFGVTSLVAWMLSPWRPQASFSLSDLRSLLGFSANLSAFRIFNFLLLHGDKVIVGRFLGAASLGFYGL
GQRVLMYPVSSVSTALQEVMFAGLSRLQHDHAAIRRVYFRSCAVTALVCFPVMAGLAVVAPDLVMVALGERWEPMVTLIR
ILAPIGGIQSVSFGVGVLYNATGRTDLLLRWGMVSGPLMIASYFAGLPWGINGVAAAYAIMIVLLLPPGFAIPFRLVDAR
LRELVAAIWPHLMATGVTVAAMTAVQWLSHGMDLPRPICLTSSVLAGAASYVGVTWIQRPPALADLLMFVRRGEPRVGTA
DQVA

Sequences:

>Translated_484_residues
MVRGARWMTVDQITVQVSRLLVQIVLARLLEPRAFGLMTMALVVVMFLEIMRGFGTGMAIVQRAEINQRLLNSVFFLNIG
LGVAVSVFLALLAPGVSALYGDAALTPVLQVLGLGLLFASIGDLQQWLLRREMKFGAVAAADIIGTTVNGVCSILLGVLG
FQVWSLVVGYVVGFGVTSLVAWMLSPWRPQASFSLSDLRSLLGFSANLSAFRIFNFLLLHGDKVIVGRFLGAASLGFYGL
GQRVLMYPVSSVSTALQEVMFAGLSRLQHDHAAIRRVYFRSCAVTALVCFPVMAGLAVVAPDLVMVALGERWEPMVTLIR
ILAPIGGIQSVSFGVGVLYNATGRTDLLLRWGMVSGPLMIASYFAGLPWGINGVAAAYAIMIVLLLPPGFAIPFRLVDAR
LRELVAAIWPHLMATGVTVAAMTAVQWLSHGMDLPRPICLTSSVLAGAASYVGVTWIQRPPALADLLMFVRRGEPRVGTA
DQVA
>Mature_484_residues
MVRGARWMTVDQITVQVSRLLVQIVLARLLEPRAFGLMTMALVVVMFLEIMRGFGTGMAIVQRAEINQRLLNSVFFLNIG
LGVAVSVFLALLAPGVSALYGDAALTPVLQVLGLGLLFASIGDLQQWLLRREMKFGAVAAADIIGTTVNGVCSILLGVLG
FQVWSLVVGYVVGFGVTSLVAWMLSPWRPQASFSLSDLRSLLGFSANLSAFRIFNFLLLHGDKVIVGRFLGAASLGFYGL
GQRVLMYPVSSVSTALQEVMFAGLSRLQHDHAAIRRVYFRSCAVTALVCFPVMAGLAVVAPDLVMVALGERWEPMVTLIR
ILAPIGGIQSVSFGVGVLYNATGRTDLLLRWGMVSGPLMIASYFAGLPWGINGVAAAYAIMIVLLLPPGFAIPFRLVDAR
LRELVAAIWPHLMATGVTVAAMTAVQWLSHGMDLPRPICLTSSVLAGAASYVGVTWIQRPPALADLLMFVRRGEPRVGTA
DQVA

Specific function: Lipopolysaccharide biosynthesis. [C]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788359, Length=371, Percent_Identity=26.4150943396226, Blast_Score=158, Evalue=9e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 51988; Mature: 51988

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCC
>Mature Secondary Structure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CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8759852; 9097040; 9278503 [H]