| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318287
Identifier: 158318287
GI number: 158318287
Start: 7968528
End: 7969730
Strand: Reverse
Name: 158318287
Synonym: Franean1_6552
Alternate gene names: NA
Gene position: 7969730-7968528 (Counterclockwise)
Preceding gene: 158318288
Following gene: 158318286
Centisome position: 88.73
GC content: 70.82
Gene sequence:
>1203_bases ATGACCGTCACGGCGGAAGACCCGGTGGCGGCGTCCCAGGACGTGGTGCTCACCCTGTTCAGAGAAACGCTCCAGGATAT GGCGATCAGGGCGTATATGCGTCCACCCGACCGCCTGCTCATCACCCTGCTGCGCTCGTCACGGGTGAGCCGGGTCCTGG TGGCGGAGCCGTTCCGCAGCCTGCTCGGCACGATGGTTCGGGGTGGGCGGATGGTCGCCCTGCCGCCGGCCAGCGGACCC GAGCGGTACCTGGTGTCGCCGCAGCGGTGGCGACGGGACGATCCGGCGTCGCTGCCGCTGGTGCGCAGCACCTACCGTCG CTACGACGCCGCGCTGCGCCGGCGCGTGGCCCAGGCCAGCTGTGAGCGGCCCGTCCTGATTACCACGAACCCCCTGGTGG CGGGCTTTGCCGAAGCGGAATGGGCGAACTCGGTCGTGTATTTCGCGCGGGACGACTGGGCGTCGTCCCCGCCGCTGCGG CGGTGGCATCCGGCATTCCGCCGGGCCTATGTGGAGATCCGCCGACGCCGACGGCCGGTCATCGCGGTCTCCCGGCCGCT CCTGGAGCGCATAGACCCGACCGGCGAGGGCCTGGTCGTCCACAACGCCGTCGATCCGGCTGAATGGCGGCGTCCACCGG CCCCGCCGGAGTGGCTTCAGCGGCTCCCGCGGCCGTGGTGTGTATATGCCGGCAGCGTCGACGACCGCCTCGATCTGGAC CTGGTTCGACGCCTGGCCTCGGCCGGCACTGTGGTTCTGGCCGGCCCGGTCGAGCGCGAGGAACACGTCAGACCGCTGCG GTCGGTTCCCTCGGTGCACCTGCCGGGCCATCTGCCGCGGCCGGTTGTCACGGGAGTGATCGCTGCGGCCGACGTGTGTC TGCTCACGCACCGACGCACCCCGCTCACCGAGGCAATGGACCCTATCAAGATCTACGAATACCTCGCGGCCGGCTGTCCT GTGATCGCCACGGACCTCACCCCCGTCCGTGACATCAGCCCGCGGGTCCGGCGGCTGGGGCCCGGGGAGGATCCGGTGTC CGTGCTGCGCGAGGTTCTTGCCTGGCCCGCAGTTGACGAGGCCGAGCGGCTGGCCTTTGTCGACCGCAACAGCTGGGCAT CCCGGCATGTCAGCCTGCTCCACTTTGCCCTCGGCGGGTCCTCGTCTCCCGTACCGGCCGGCCCCCTGCCGCTACACGCC TGA
Upstream 100 bases:
>100_bases GCTACCGAATGAAACGAGGTCGAGCCGTGAAAACGAGATGTCCTACGGCCGCCACCGTTCCCGGTGACCAGCCCTCAAGC GAACATCGGCAGGGCCGTCG
Downstream 100 bases:
>100_bases TCGAGAGCTGGAAGGATCCGATGGCTCGACTTGGACCGACCATCCGGCGCCGGTACGTCCTCATCGCGCTCGTGGCGGCG GTGGTCGCGGCCGGTGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MTVTAEDPVAASQDVVLTLFRETLQDMAIRAYMRPPDRLLITLLRSSRVSRVLVAEPFRSLLGTMVRGGRMVALPPASGP ERYLVSPQRWRRDDPASLPLVRSTYRRYDAALRRRVAQASCERPVLITTNPLVAGFAEAEWANSVVYFARDDWASSPPLR RWHPAFRRAYVEIRRRRRPVIAVSRPLLERIDPTGEGLVVHNAVDPAEWRRPPAPPEWLQRLPRPWCVYAGSVDDRLDLD LVRRLASAGTVVLAGPVEREEHVRPLRSVPSVHLPGHLPRPVVTGVIAAADVCLLTHRRTPLTEAMDPIKIYEYLAAGCP VIATDLTPVRDISPRVRRLGPGEDPVSVLREVLAWPAVDEAERLAFVDRNSWASRHVSLLHFALGGSSSPVPAGPLPLHA
Sequences:
>Translated_400_residues MTVTAEDPVAASQDVVLTLFRETLQDMAIRAYMRPPDRLLITLLRSSRVSRVLVAEPFRSLLGTMVRGGRMVALPPASGP ERYLVSPQRWRRDDPASLPLVRSTYRRYDAALRRRVAQASCERPVLITTNPLVAGFAEAEWANSVVYFARDDWASSPPLR RWHPAFRRAYVEIRRRRRPVIAVSRPLLERIDPTGEGLVVHNAVDPAEWRRPPAPPEWLQRLPRPWCVYAGSVDDRLDLD LVRRLASAGTVVLAGPVEREEHVRPLRSVPSVHLPGHLPRPVVTGVIAAADVCLLTHRRTPLTEAMDPIKIYEYLAAGCP VIATDLTPVRDISPRVRRLGPGEDPVSVLREVLAWPAVDEAERLAFVDRNSWASRHVSLLHFALGGSSSPVPAGPLPLHA >Mature_399_residues TVTAEDPVAASQDVVLTLFRETLQDMAIRAYMRPPDRLLITLLRSSRVSRVLVAEPFRSLLGTMVRGGRMVALPPASGPE RYLVSPQRWRRDDPASLPLVRSTYRRYDAALRRRVAQASCERPVLITTNPLVAGFAEAEWANSVVYFARDDWASSPPLRR WHPAFRRAYVEIRRRRRPVIAVSRPLLERIDPTGEGLVVHNAVDPAEWRRPPAPPEWLQRLPRPWCVYAGSVDDRLDLDL VRRLASAGTVVLAGPVEREEHVRPLRSVPSVHLPGHLPRPVVTGVIAAADVCLLTHRRTPLTEAMDPIKIYEYLAAGCPV IATDLTPVRDISPRVRRLGPGEDPVSVLREVLAWPAVDEAERLAFVDRNSWASRHVSLLHFALGGSSSPVPAGPLPLHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44641; Mature: 44510
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTAEDPVAASQDVVLTLFRETLQDMAIRAYMRPPDRLLITLLRSSRVSRVLVAEPFRS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLGTMVRGGRMVALPPASGPERYLVSPQRWRRDDPASLPLVRSTYRRYDAALRRRVAQAS HHHHHHCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH CERPVLITTNPLVAGFAEAEWANSVVYFARDDWASSPPLRRWHPAFRRAYVEIRRRRRPV CCCCEEEECCCHHHCCHHHHHCCCEEEEEECCCCCCCCHHHHCHHHHHHHHHHHHHCCCE IAVSRPLLERIDPTGEGLVVHNAVDPAEWRRPPAPPEWLQRLPRPWCVYAGSVDDRLDLD EEEHHHHHHHCCCCCCCEEEECCCCHHHCCCCCCCHHHHHHCCCCEEEEECCCCCCCCHH LVRRLASAGTVVLAGPVEREEHVRPLRSVPSVHLPGHLPRPVVTGVIAAADVCLLTHRRT HHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC PLTEAMDPIKIYEYLAAGCPVIATDLTPVRDISPRVRRLGPGEDPVSVLREVLAWPAVDE CHHHHCCHHHHHHHHHCCCCEEECCCCCCHHCCHHHHHCCCCCCHHHHHHHHHCCCCCCC AERLAFVDRNSWASRHVSLLHFALGGSSSPVPAGPLPLHA HHHEEEECCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCC >Mature Secondary Structure TVTAEDPVAASQDVVLTLFRETLQDMAIRAYMRPPDRLLITLLRSSRVSRVLVAEPFRS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLGTMVRGGRMVALPPASGPERYLVSPQRWRRDDPASLPLVRSTYRRYDAALRRRVAQAS HHHHHHCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH CERPVLITTNPLVAGFAEAEWANSVVYFARDDWASSPPLRRWHPAFRRAYVEIRRRRRPV CCCCEEEECCCHHHCCHHHHHCCCEEEEEECCCCCCCCHHHHCHHHHHHHHHHHHHCCCE IAVSRPLLERIDPTGEGLVVHNAVDPAEWRRPPAPPEWLQRLPRPWCVYAGSVDDRLDLD EEEHHHHHHHCCCCCCCEEEECCCCHHHCCCCCCCHHHHHHCCCCEEEEECCCCCCCCHH LVRRLASAGTVVLAGPVEREEHVRPLRSVPSVHLPGHLPRPVVTGVIAAADVCLLTHRRT HHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC PLTEAMDPIKIYEYLAAGCPVIATDLTPVRDISPRVRRLGPGEDPVSVLREVLAWPAVDE CHHHHCCHHHHHHHHHCCCCEEECCCCCCHHCCHHHHHCCCCCCHHHHHHHHHCCCCCCC AERLAFVDRNSWASRHVSLLHFALGGSSSPVPAGPLPLHA HHHEEEECCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA