| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318282
Identifier: 158318282
GI number: 158318282
Start: 7962932
End: 7964074
Strand: Direct
Name: 158318282
Synonym: Franean1_6547
Alternate gene names: NA
Gene position: 7962932-7964074 (Clockwise)
Preceding gene: 158318281
Following gene: 158318294
Centisome position: 88.65
GC content: 71.39
Gene sequence:
>1143_bases ATGACGGTCCGACTCGCCCGCACAGCGGTCCTGGCGATGCTGCGCGCGGGAACAGCAGACCCCCGGCTCTCCCGCTGGCA GCCGCGGCCGGAGCTGCGGGTACCGGCGACAACGGTGGGCCGCGCCCGCTGGCCGGCGGTGGACGCGCACAACCATCTGG GCCGCTGGCTATGCCGGGACGGCGGATGGATGGTTCCGGACGTGGGCGCCTTCCTGGCGCTGATGGACGAGCTGAACATC ATGACAGTGGTGAACCTGGACGGCCGGTGGGGCGCCGAGCTGGCGGCTAACCTGGATCGGTACGACCGGGCGCACCCGGG TCGGTTCCTCACCTACTGCCATCTGGACTGGTCCCTGCTGCGATCGCGGCGGCCCAGCGCGGCACTGGTGGCATCGCTGC GCACGTCCGCGGACGCCGGCGCGCGCGGGCTGAAGATCTGGAAGGACCTGGGGTTGCGGGTACGAGACGCCCGTGGGCGA CGGGTGCTGCCGGACGACCCTCGGCTGTCGGAGATGTTCGACGTCGCAGGGGAGCTTGGCCTGCCGGTGATGATCCACGT CGGTGACCCGGTGGCCTTCTTCCGCCGTCCGGACCGGCACAATGAACGTCTCGACGAGCTGCGGCGGCATCCCACCGCTG CGCGTGCCGGCGTTTCCCGCAGATTCCCGGGCTGCGGCGGGCCGGGCCTGCCCCGGCTGGTCGAGGCGTTGGAGTCGACG GTGGCCGCACACCCGCGCACCACGTTCGTGGCCGCCCACGTCGGCTGCCTTGCGGAGGATCTCGGGCGGGTCGAACGGAT GCTCGACGCCCACCCGAACCTGGTGGTGGACATCTCCGCCCGGCTCGCCGAGCTTGGCCGGCAGCCGCGGGTCGCCAACC GGTTCATCACCCGTTTCGCGGATCGGGTGTTGTTCGGGACGGACGCGTTCCCACCATCCGCCGATGGCTTCCGCGGGTAC TTCCGACTGCTCGAGACCGACGACGACCACTTCCCCTACTCGGCGGAATGGCCGCCGCCGCAGGGCCGGTGGGCCGTCTA CGGCCTGGGCCTCGAGCCCGACGTATTGCGCCGGGTGTACGGGACCAATGCGGCCCGGCTTCTCCCGGGGGTGCCCGATC CAGAGCACGCTGTCCACGTCTAA
Upstream 100 bases:
>100_bases GGTCTCGCCACCGATCAATCATTCTGACCACCGGACGGCTGGACGGCGGGTACCCCCGGGCAGATGCAAGTGGTCAGATG AGGGTGAAGGTCAGGTGAAG
Downstream 100 bases:
>100_bases GTCTCCGCTGTTCAGGGCACCACTGTGGTCGCCGGTGCGGCCGTCGTGGGCCGTCAGCCGGGAGCGCCTCCGGGGCGGGC ACGCACCGCGGCCTGGTAGA
Product: amidohydrolase 2
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MTVRLARTAVLAMLRAGTADPRLSRWQPRPELRVPATTVGRARWPAVDAHNHLGRWLCRDGGWMVPDVGAFLALMDELNI MTVVNLDGRWGAELAANLDRYDRAHPGRFLTYCHLDWSLLRSRRPSAALVASLRTSADAGARGLKIWKDLGLRVRDARGR RVLPDDPRLSEMFDVAGELGLPVMIHVGDPVAFFRRPDRHNERLDELRRHPTAARAGVSRRFPGCGGPGLPRLVEALEST VAAHPRTTFVAAHVGCLAEDLGRVERMLDAHPNLVVDISARLAELGRQPRVANRFITRFADRVLFGTDAFPPSADGFRGY FRLLETDDDHFPYSAEWPPPQGRWAVYGLGLEPDVLRRVYGTNAARLLPGVPDPEHAVHV
Sequences:
>Translated_380_residues MTVRLARTAVLAMLRAGTADPRLSRWQPRPELRVPATTVGRARWPAVDAHNHLGRWLCRDGGWMVPDVGAFLALMDELNI MTVVNLDGRWGAELAANLDRYDRAHPGRFLTYCHLDWSLLRSRRPSAALVASLRTSADAGARGLKIWKDLGLRVRDARGR RVLPDDPRLSEMFDVAGELGLPVMIHVGDPVAFFRRPDRHNERLDELRRHPTAARAGVSRRFPGCGGPGLPRLVEALEST VAAHPRTTFVAAHVGCLAEDLGRVERMLDAHPNLVVDISARLAELGRQPRVANRFITRFADRVLFGTDAFPPSADGFRGY FRLLETDDDHFPYSAEWPPPQGRWAVYGLGLEPDVLRRVYGTNAARLLPGVPDPEHAVHV >Mature_379_residues TVRLARTAVLAMLRAGTADPRLSRWQPRPELRVPATTVGRARWPAVDAHNHLGRWLCRDGGWMVPDVGAFLALMDELNIM TVVNLDGRWGAELAANLDRYDRAHPGRFLTYCHLDWSLLRSRRPSAALVASLRTSADAGARGLKIWKDLGLRVRDARGRR VLPDDPRLSEMFDVAGELGLPVMIHVGDPVAFFRRPDRHNERLDELRRHPTAARAGVSRRFPGCGGPGLPRLVEALESTV AAHPRTTFVAAHVGCLAEDLGRVERMLDAHPNLVVDISARLAELGRQPRVANRFITRFADRVLFGTDAFPPSADGFRGYF RLLETDDDHFPYSAEWPPPQGRWAVYGLGLEPDVLRRVYGTNAARLLPGVPDPEHAVHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42332; Mature: 42201
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRLARTAVLAMLRAGTADPRLSRWQPRPELRVPATTVGRARWPAVDAHNHLGRWLCRD CCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHCC GGWMVPDVGAFLALMDELNIMTVVNLDGRWGAELAANLDRYDRAHPGRFLTYCHLDWSLL CCEECCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHH RSRRPSAALVASLRTSADAGARGLKIWKDLGLRVRDARGRRVLPDDPRLSEMFDVAGELG HCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHCC LPVMIHVGDPVAFFRRPDRHNERLDELRRHPTAARAGVSRRFPGCGGPGLPRLVEALEST CCEEEEECCCHHHHCCCCCHHHHHHHHHHCCCHHHHCHHHCCCCCCCCCHHHHHHHHHHH VAAHPRTTFVAAHVGCLAEDLGRVERMLDAHPNLVVDISARLAELGRQPRVANRFITRFA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCHHHHHHHHHH DRVLFGTDAFPPSADGFRGYFRLLETDDDHFPYSAEWPPPQGRWAVYGLGLEPDVLRRVY HHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHH GTNAARLLPGVPDPEHAVHV CCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure TVRLARTAVLAMLRAGTADPRLSRWQPRPELRVPATTVGRARWPAVDAHNHLGRWLCRD CEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHCC GGWMVPDVGAFLALMDELNIMTVVNLDGRWGAELAANLDRYDRAHPGRFLTYCHLDWSLL CCEECCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHH RSRRPSAALVASLRTSADAGARGLKIWKDLGLRVRDARGRRVLPDDPRLSEMFDVAGELG HCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHCC LPVMIHVGDPVAFFRRPDRHNERLDELRRHPTAARAGVSRRFPGCGGPGLPRLVEALEST CCEEEEECCCHHHHCCCCCHHHHHHHHHHCCCHHHHCHHHCCCCCCCCCHHHHHHHHHHH VAAHPRTTFVAAHVGCLAEDLGRVERMLDAHPNLVVDISARLAELGRQPRVANRFITRFA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCHHHHHHHHHH DRVLFGTDAFPPSADGFRGYFRLLETDDDHFPYSAEWPPPQGRWAVYGLGLEPDVLRRVY HHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHH GTNAARLLPGVPDPEHAVHV CCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA