| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cpsE [H]
Identifier: 158318277
GI number: 158318277
Start: 7956832
End: 7958334
Strand: Direct
Name: cpsE [H]
Synonym: Franean1_6542
Alternate gene names: 158318277
Gene position: 7956832-7958334 (Clockwise)
Preceding gene: 158318276
Following gene: 158318281
Centisome position: 88.59
GC content: 68.0
Gene sequence:
>1503_bases ATGGAGACAGATGCCGTGCCGACTGTCCTGGGGGGAGATGCGCCCGTCCCGGCCATCCCTCGGCAGCGGTGTCCGGACGA ATGGCCGGCGGCCGGCAGCCAGCGGTGGAAGGCACGGCTGTGCACGCAGCTCGTGGTGATCGACACTTTGGCGATCGTCG TCGCGATCGTCTGCGCCTACCTCCTCCGCTTCGGCATCGAAGCGGAGGCGACCGCTCGGGGGATGTGGTACCTGTCCATC GGCACCTGCATCGCATTGGCGTGGCTTGTCATGCTGGGTGCCACCGACGCCTACGCGACGAGATACCTCGGCGTGGGGAC CGAGGAGTACCGGCGCATCAGCGTCGGGACCTTCCGGCTGTGGGGCGCCACGACAATCGGGTGCTACGTCCTGCGGGCGG AGGTCGCGCGGGGCTTCTGCCTGATCGCCCTGCCCCTCGGACTCCTGCTACTGCTGACCGGCCGGGCGCTCGCCCGCCTC CGGTTGGTCTCCGTTCGGCGGACCGGGCATGCCCGCCACCGGGTCGTGGTGGTCGGCGACTCTCGTTCGGTCTTGGAACT CGTCGGTGAGTTCCATCATGAACCCGCGGCCGGATTCGACGTCATCGGCGTGTGTGTGCCGAAGGGGGCCCGACGCCCCG ACGGCAACGTCGGTGCTCCCGTGCTCGGATCATTGGAACAGGTGAGCTCCGTCGTCGCCGCTACCGGCGCCGACACGGTT GTGGTCACCTCCTCCGCATCGCTCGACATCGAGACAGCGAAGGGTATTGCCTGGGAGCTGGAGGGCACCGGGGTCGACCT GGTCGTGGCCCCGCCCCTGGGCGGGATTGCCGGGCCGCGCGTGTCACTGCGGCCGGTCGCCGGCCTCCCTCTCCTCCACG TGGAGGAGCCGGTGTTCACCGGCTGGCGAAAGTTCGCCAAGAACATGCTGGACCGGGCCCTCGCCGCCGTCGCTCTCGTC GTTCTGTGCCCGTTGCTACTCGCCGTCGTGCTGCTCATCCGTTTCGACAGCAGCGGACCCGCGCTGTTCCGGCAGACACG AACGGGTAAGGACGGACGCGACTTCGAGATCCTGAAGTTCCGCACCATGTATGTGGACGCCGAGCAGCGCCGGGCGGTAC TGGAGAATCACAACGAGGCCGACGGGCTCCTTTTCAAGATTCGTGACGACCCCCGGGTGACCCGGGTCGGGCGGACGCTC CGTCGGCTGTCCGTCGACGAACTGCCCCAGTTCGTCAACGTCCTGCGGGGGGAGATGTCGCTGGTAGGTCCGCGGCCCCC GCTGCCGTCGGAAGTCGCTCGGTACAGCGGACCCGTACACCGCCGATTGAAGGTCAAGCCCGGCCTCACCGGCCTGTGGC AGGTGAGCGGACGCTCGGAGCTGCCGTGGCGGGATGCCGTCCGGCTCGACCTCTACTACGTGGAGAACTGGTCCATCATG TTCGATCTGATCATCATCCTGCGGACCGTCCGGGCGGTACTCGGTAGGTCGGGAGCGTTCTGA
Upstream 100 bases:
>100_bases CCTGGAGAGGCGACGAACGGTGATGACATGACCGCGCCGAGAAGATGACGAAATGAAGATCTGAAGTATCCAGCCTGGTA TGTAAAGTGGGGGGTCCGTG
Downstream 100 bases:
>100_bases GACGCCCTGCTGCGGGCCTGCCGGAGGTCGTACCAGTCGGCGGGCCCGTCGATGCGTCTACCCGTCACACCGGTGGCCGG GCCGCGCTTTCTTCGCGTCC
Product: undecaprenyl-phosphate galactose phosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues METDAVPTVLGGDAPVPAIPRQRCPDEWPAAGSQRWKARLCTQLVVIDTLAIVVAIVCAYLLRFGIEAEATARGMWYLSI GTCIALAWLVMLGATDAYATRYLGVGTEEYRRISVGTFRLWGATTIGCYVLRAEVARGFCLIALPLGLLLLLTGRALARL RLVSVRRTGHARHRVVVVGDSRSVLELVGEFHHEPAAGFDVIGVCVPKGARRPDGNVGAPVLGSLEQVSSVVAATGADTV VVTSSASLDIETAKGIAWELEGTGVDLVVAPPLGGIAGPRVSLRPVAGLPLLHVEEPVFTGWRKFAKNMLDRALAAVALV VLCPLLLAVVLLIRFDSSGPALFRQTRTGKDGRDFEILKFRTMYVDAEQRRAVLENHNEADGLLFKIRDDPRVTRVGRTL RRLSVDELPQFVNVLRGEMSLVGPRPPLPSEVARYSGPVHRRLKVKPGLTGLWQVSGRSELPWRDAVRLDLYYVENWSIM FDLIIILRTVRAVLGRSGAF
Sequences:
>Translated_500_residues METDAVPTVLGGDAPVPAIPRQRCPDEWPAAGSQRWKARLCTQLVVIDTLAIVVAIVCAYLLRFGIEAEATARGMWYLSI GTCIALAWLVMLGATDAYATRYLGVGTEEYRRISVGTFRLWGATTIGCYVLRAEVARGFCLIALPLGLLLLLTGRALARL RLVSVRRTGHARHRVVVVGDSRSVLELVGEFHHEPAAGFDVIGVCVPKGARRPDGNVGAPVLGSLEQVSSVVAATGADTV VVTSSASLDIETAKGIAWELEGTGVDLVVAPPLGGIAGPRVSLRPVAGLPLLHVEEPVFTGWRKFAKNMLDRALAAVALV VLCPLLLAVVLLIRFDSSGPALFRQTRTGKDGRDFEILKFRTMYVDAEQRRAVLENHNEADGLLFKIRDDPRVTRVGRTL RRLSVDELPQFVNVLRGEMSLVGPRPPLPSEVARYSGPVHRRLKVKPGLTGLWQVSGRSELPWRDAVRLDLYYVENWSIM FDLIIILRTVRAVLGRSGAF >Mature_500_residues METDAVPTVLGGDAPVPAIPRQRCPDEWPAAGSQRWKARLCTQLVVIDTLAIVVAIVCAYLLRFGIEAEATARGMWYLSI GTCIALAWLVMLGATDAYATRYLGVGTEEYRRISVGTFRLWGATTIGCYVLRAEVARGFCLIALPLGLLLLLTGRALARL RLVSVRRTGHARHRVVVVGDSRSVLELVGEFHHEPAAGFDVIGVCVPKGARRPDGNVGAPVLGSLEQVSSVVAATGADTV VVTSSASLDIETAKGIAWELEGTGVDLVVAPPLGGIAGPRVSLRPVAGLPLLHVEEPVFTGWRKFAKNMLDRALAAVALV VLCPLLLAVVLLIRFDSSGPALFRQTRTGKDGRDFEILKFRTMYVDAEQRRAVLENHNEADGLLFKIRDDPRVTRVGRTL RRLSVDELPQFVNVLRGEMSLVGPRPPLPSEVARYSGPVHRRLKVKPGLTGLWQVSGRSELPWRDAVRLDLYYVENWSIM FDLIIILRTVRAVLGRSGAF
Specific function: Galactosyl transferase is essential for the assembly of the group B streptococci (GBS) type III capsular polysaccharide. May be involved in the formation of either or both galactosidic bonds by catalyzing the addition of galactose to an oligosaccharide pr
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=349, Percent_Identity=32.378223495702, Blast_Score=160, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 54480; Mature: 54480
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METDAVPTVLGGDAPVPAIPRQRCPDEWPAAGSQRWKARLCTQLVVIDTLAIVVAIVCAY CCCCCCCEEECCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRFGIEAEATARGMWYLSIGTCIALAWLVMLGATDAYATRYLGVGTEEYRRISVGTFRL HHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHEEEEECEEEE WGATTIGCYVLRAEVARGFCLIALPLGLLLLLTGRALARLRLVSVRRTGHARHRVVVVGD CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC SRSVLELVGEFHHEPAAGFDVIGVCVPKGARRPDGNVGAPVLGSLEQVSSVVAATGADTV CHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCEE VVTSSASLDIETAKGIAWELEGTGVDLVVAPPLGGIAGPRVSLRPVAGLPLLHVEEPVFT EEECCCCEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCEEECCCCCCCEEEECCHHHH GWRKFAKNMLDRALAAVALVVLCPLLLAVVLLIRFDSSGPALFRQTRTGKDGRDFEILKF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHCCCCCCCCCEEEEEE RTMYVDAEQRRAVLENHNEADGLLFKIRDDPRVTRVGRTLRRLSVDELPQFVNVLRGEMS EEEEECHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHH LVGPRPPLPSEVARYSGPVHRRLKVKPGLTGLWQVSGRSELPWRDAVRLDLYYVENWSIM CCCCCCCCHHHHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEEEECHHHH FDLIIILRTVRAVLGRSGAF HHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure METDAVPTVLGGDAPVPAIPRQRCPDEWPAAGSQRWKARLCTQLVVIDTLAIVVAIVCAY CCCCCCCEEECCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRFGIEAEATARGMWYLSIGTCIALAWLVMLGATDAYATRYLGVGTEEYRRISVGTFRL HHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHEEEEECEEEE WGATTIGCYVLRAEVARGFCLIALPLGLLLLLTGRALARLRLVSVRRTGHARHRVVVVGD CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC SRSVLELVGEFHHEPAAGFDVIGVCVPKGARRPDGNVGAPVLGSLEQVSSVVAATGADTV CHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCEE VVTSSASLDIETAKGIAWELEGTGVDLVVAPPLGGIAGPRVSLRPVAGLPLLHVEEPVFT EEECCCCEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCEEECCCCCCCEEEECCHHHH GWRKFAKNMLDRALAAVALVVLCPLLLAVVLLIRFDSSGPALFRQTRTGKDGRDFEILKF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHCCCCCCCCCEEEEEE RTMYVDAEQRRAVLENHNEADGLLFKIRDDPRVTRVGRTLRRLSVDELPQFVNVLRGEMS EEEEECHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHH LVGPRPPLPSEVARYSGPVHRRLKVKPGLTGLWQVSGRSELPWRDAVRLDLYYVENWSIM CCCCCCCCHHHHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEEEECHHHH FDLIIILRTVRAVLGRSGAF HHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8355611; 10913080; 11773119; 12354221 [H]