| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is cyp123 [H]
Identifier: 158318272
GI number: 158318272
Start: 7949208
End: 7950491
Strand: Reverse
Name: cyp123 [H]
Synonym: Franean1_6537
Alternate gene names: 158318272
Gene position: 7950491-7949208 (Counterclockwise)
Preceding gene: 158318273
Following gene: 158318270
Centisome position: 88.52
GC content: 69.24
Gene sequence:
>1284_bases ATGCCTCCGGTGACCGGCCGGGCGCGGGCATGGCGACGTGAACTGGCTGTCCTCGGTGGCTCGCAGCGCGGGCCTGGCAC AGAGAAGGGCTCAACCGTGACGGAAGACCTGTACTGGGACCCGTTCGACAAGATCATCGACGTCAATCCGCATCCGCTGT GGCGCCGGCTGCGGGACGAGGCACCGGTCTACCGCAACGAGAAGCACGACTTCTACGCGCTCTCCCGGCACGCGGACGTC GACGCGGCCCACGTCGAGCCCGAGACGTACAGCTCCGCGCACGGCACGGTCCTCGAGCTCATGGGGCCGGAGCCGTTCAA CACCGGCCAGATCATCTTCATGGACCCGCCCACGCACACGCTGCTGCGCGTCCTGGTCTCGCGGGCGTTCACGCCGCGAC GGGTCGGCGGGCTCGAGGGGAGCATCCGCGAGATCTGTGCAGAGCTGCTGGATCCCCAGATCGGCGGCGGCGGGTTCGAC TACGTCCAGGACTTCGCCGCCCAGCTCCCCTCTCTGGTCATCTCCAAGCTCATCGGCGTCGACGAGGCCGACCGGGAGGA GATCCGGCAGACGATCGACCAGACCTTCCACATCGAGGAGGGCAAGGGGATGATCAACGACGTCTCCTTCGCCGCGCAGA TCAAGCTGCACACTTACTTCTCCGAGCAGATCGACGCGCGGCGCACGGCCCCGCGCGACGACATGATGACCGGCCTCGCC GAGGCCGAGATCACCACCGACGAGGGCGCCCGCCGGCTCACCACCTCCGAGGCCGCCGACTTCACCAACCTGCTCGTCGC CGCCGGTACCGAGACCGTCGCCCGCCTGCTCGGCTGGGCCGGTGACCTGCTCGAGGCCCACCCGGACCAGCGTGCCGAGC TGGCCGCCGACCCGTCGCTGCTGGGCAACGCCGTCGAGGAGACGCTGCGCTACGAGTCGCCGTCCCCCGTGCAGGGCCGG GTGAACACCCGTGAGGTCGAGCTGCACGGCACCACGATCCCGGCAAAGTCCAGGATCCTGCTGCTCACCTCGTCCGCCAA CCGGGACGAACGCAAGTACCCGGACGCGGACCGCTACGACATCAGGCGCAACTTCGACAGCCACCTGGCGTTCGGCCGCG GCCCGCACTTCTGCCTCGGTGCGGCGCTCGCCCGCATGGAGGGCCGGATCGCGCTGGAGGAGACCCTGCGCCGCTTCCCG AACTACGAGGTCGACCGAGACAACGCGGTGCGCCTGCACACCAGCACCGTGCGCGGCTACGAGAAGCTGCCCATCAAGGT CTGA
Upstream 100 bases:
>100_bases GAGTGCGTCCCACGCCAATCTGCTCATAAGCGTTGACGAACTGGCGGTGACGTGTCTTGCCCGGTGCAGACATCGGCCTG GTCAGGGAGTTGCGGCCGTG
Downstream 100 bases:
>100_bases GTGAGCATCTCCCCGCGCGGCGCGCGCCGCGCGCCGCGCGGGGAGTCCGGGACCGGGTCTGGTTACGCGGGTCCGGTCCG GTGCCGGCCCGCCGCGCCGG
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MPPVTGRARAWRRELAVLGGSQRGPGTEKGSTVTEDLYWDPFDKIIDVNPHPLWRRLRDEAPVYRNEKHDFYALSRHADV DAAHVEPETYSSAHGTVLELMGPEPFNTGQIIFMDPPTHTLLRVLVSRAFTPRRVGGLEGSIREICAELLDPQIGGGGFD YVQDFAAQLPSLVISKLIGVDEADREEIRQTIDQTFHIEEGKGMINDVSFAAQIKLHTYFSEQIDARRTAPRDDMMTGLA EAEITTDEGARRLTTSEAADFTNLLVAAGTETVARLLGWAGDLLEAHPDQRAELAADPSLLGNAVEETLRYESPSPVQGR VNTREVELHGTTIPAKSRILLLTSSANRDERKYPDADRYDIRRNFDSHLAFGRGPHFCLGAALARMEGRIALEETLRRFP NYEVDRDNAVRLHTSTVRGYEKLPIKV
Sequences:
>Translated_427_residues MPPVTGRARAWRRELAVLGGSQRGPGTEKGSTVTEDLYWDPFDKIIDVNPHPLWRRLRDEAPVYRNEKHDFYALSRHADV DAAHVEPETYSSAHGTVLELMGPEPFNTGQIIFMDPPTHTLLRVLVSRAFTPRRVGGLEGSIREICAELLDPQIGGGGFD YVQDFAAQLPSLVISKLIGVDEADREEIRQTIDQTFHIEEGKGMINDVSFAAQIKLHTYFSEQIDARRTAPRDDMMTGLA EAEITTDEGARRLTTSEAADFTNLLVAAGTETVARLLGWAGDLLEAHPDQRAELAADPSLLGNAVEETLRYESPSPVQGR VNTREVELHGTTIPAKSRILLLTSSANRDERKYPDADRYDIRRNFDSHLAFGRGPHFCLGAALARMEGRIALEETLRRFP NYEVDRDNAVRLHTSTVRGYEKLPIKV >Mature_426_residues PPVTGRARAWRRELAVLGGSQRGPGTEKGSTVTEDLYWDPFDKIIDVNPHPLWRRLRDEAPVYRNEKHDFYALSRHADVD AAHVEPETYSSAHGTVLELMGPEPFNTGQIIFMDPPTHTLLRVLVSRAFTPRRVGGLEGSIREICAELLDPQIGGGGFDY VQDFAAQLPSLVISKLIGVDEADREEIRQTIDQTFHIEEGKGMINDVSFAAQIKLHTYFSEQIDARRTAPRDDMMTGLAE AEITTDEGARRLTTSEAADFTNLLVAAGTETVARLLGWAGDLLEAHPDQRAELAADPSLLGNAVEETLRYESPSPVQGRV NTREVELHGTTIPAKSRILLLTSSANRDERKYPDADRYDIRRNFDSHLAFGRGPHFCLGAALARMEGRIALEETLRRFPN YEVDRDNAVRLHTSTVRGYEKLPIKV
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 47676; Mature: 47545
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPVTGRARAWRRELAVLGGSQRGPGTEKGSTVTEDLYWDPFDKIIDVNPHPLWRRLRDE CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCHHHEEECCCCHHHHHHHHC APVYRNEKHDFYALSRHADVDAAHVEPETYSSAHGTVLELMGPEPFNTGQIIFMDPPTHT CCCCCCCCCCEEEECCCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCHHH LLRVLVSRAFTPRRVGGLEGSIREICAELLDPQIGGGGFDYVQDFAAQLPSLVISKLIGV HHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC DEADREEIRQTIDQTFHIEEGKGMINDVSFAAQIKLHTYFSEQIDARRTAPRDDMMTGLA CCCCHHHHHHHHHHCEEECCCCCCHHCCCEEEEEEEEHHHHHHHHHHCCCCHHHHHHHHH EAEITTDEGARRLTTSEAADFTNLLVAAGTETVARLLGWAGDLLEAHPDQRAELAADPSL HCEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHH LGNAVEETLRYESPSPVQGRVNTREVELHGTTIPAKSRILLLTSSANRDERKYPDADRYD HHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCHHCCCCCCHHH IRRNFDSHLAFGRGPHFCLGAALARMEGRIALEETLRRFPNYEVDRDNAVRLHTSTVRGY HHHCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEEHHHCCC EKLPIKV CCCCCCC >Mature Secondary Structure PPVTGRARAWRRELAVLGGSQRGPGTEKGSTVTEDLYWDPFDKIIDVNPHPLWRRLRDE CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCHHHEEECCCCHHHHHHHHC APVYRNEKHDFYALSRHADVDAAHVEPETYSSAHGTVLELMGPEPFNTGQIIFMDPPTHT CCCCCCCCCCEEEECCCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCHHH LLRVLVSRAFTPRRVGGLEGSIREICAELLDPQIGGGGFDYVQDFAAQLPSLVISKLIGV HHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC DEADREEIRQTIDQTFHIEEGKGMINDVSFAAQIKLHTYFSEQIDARRTAPRDDMMTGLA CCCCHHHHHHHHHHCEEECCCCCCHHCCCEEEEEEEEHHHHHHHHHHCCCCHHHHHHHHH EAEITTDEGARRLTTSEAADFTNLLVAAGTETVARLLGWAGDLLEAHPDQRAELAADPSL HCEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHH LGNAVEETLRYESPSPVQGRVNTREVELHGTTIPAKSRILLLTSSANRDERKYPDADRYD HHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCHHCCCCCCHHH IRRNFDSHLAFGRGPHFCLGAALARMEGRIALEETLRRFPNYEVDRDNAVRLHTSTVRGY HHHCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEEHHHCCC EKLPIKV CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]