| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318262
Identifier: 158318262
GI number: 158318262
Start: 7937026
End: 7937415
Strand: Direct
Name: 158318262
Synonym: Franean1_6527
Alternate gene names: NA
Gene position: 7937026-7937415 (Clockwise)
Preceding gene: 158318260
Following gene: 158318263
Centisome position: 88.37
GC content: 73.59
Gene sequence:
>390_bases ATGACGCACCCACGCCCGCGGCACCACGAGATCTCCGTACTGCCCGACCGCGAGGACCTGATGGCCGAGCTGGCGAGCCG GCTCGAGGCCCTGGACGCCCTGCTGAGCCGGCTCGAGGACGCCGAGCGCCAGGCCGCGGACGCCGGTGAGCACCTCATCC GGACACGGCAGTGGCAGGAGGACACGGTCCGGACCATCCAGGAGGAGCGGGCGCGGATGCGCCAGCGCCAGCAGGCCCTG GACGACCTGGCCGAGCACGCCCGCGCGGCCGTCGAGGCCCTGCACGGCAGCCACCGCTCGCTGCCGCCCGAGGTGAAGCA GCTCGAGATCGAGCTCCAGGTCCTCAACAGCTCCGGCTTCCTGACCCGGCGCAACGGCCGGGCTCGCTGA
Upstream 100 bases:
>100_bases GGTCGCGAGTGGCGTGGTGGCGCACATCCCACGCCTTGCCGGGCCGCGCCGCGACGCCCACGGGCTGGCCCGGTGCCGCT GCCAGCCGCCGGAGCCGGGC
Downstream 100 bases:
>100_bases GCGGCGATCCCGCCGGGCGCGCCGTCGGCGCGCTCGCCCATCGGGGTCCACCTCGCCGTTTGGTGTCCGTTTCGCACTTT CGGGGCGAGATCAGGCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MTHPRPRHHEISVLPDREDLMAELASRLEALDALLSRLEDAERQAADAGEHLIRTRQWQEDTVRTIQEERARMRQRQQAL DDLAEHARAAVEALHGSHRSLPPEVKQLEIELQVLNSSGFLTRRNGRAR
Sequences:
>Translated_129_residues MTHPRPRHHEISVLPDREDLMAELASRLEALDALLSRLEDAERQAADAGEHLIRTRQWQEDTVRTIQEERARMRQRQQAL DDLAEHARAAVEALHGSHRSLPPEVKQLEIELQVLNSSGFLTRRNGRAR >Mature_128_residues THPRPRHHEISVLPDREDLMAELASRLEALDALLSRLEDAERQAADAGEHLIRTRQWQEDTVRTIQEERARMRQRQQALD DLAEHARAAVEALHGSHRSLPPEVKQLEIELQVLNSSGFLTRRNGRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14878; Mature: 14747
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHPRPRHHEISVLPDREDLMAELASRLEALDALLSRLEDAERQAADAGEHLIRTRQWQE CCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH DTVRTIQEERARMRQRQQALDDLAEHARAAVEALHGSHRSLPPEVKQLEIELQVLNSSGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECCCCC LTRRNGRAR EECCCCCCC >Mature Secondary Structure THPRPRHHEISVLPDREDLMAELASRLEALDALLSRLEDAERQAADAGEHLIRTRQWQE CCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH DTVRTIQEERARMRQRQQALDDLAEHARAAVEALHGSHRSLPPEVKQLEIELQVLNSSGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECCCCC LTRRNGRAR EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA