The gene/protein map for NC_009921 is currently unavailable.
Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318253

Identifier: 158318253

GI number: 158318253

Start: 7926093

End: 7927376

Strand: Direct

Name: 158318253

Synonym: Franean1_6518

Alternate gene names: NA

Gene position: 7926093-7927376 (Clockwise)

Preceding gene: 158318251

Following gene: 158318260

Centisome position: 88.24

GC content: 72.59

Gene sequence:

>1284_bases
GTGAGACATCGTGCGGAGGGTGAGCCCAACCCCCCGAACACACGGACCGGCGCGCACAAGCGGCGCCGTCCCACCCGCAA
CCCCGCGTGGATCGCGTCGCTCGGCGTCATGGCCCTCGTCGCCATGGCCGTCGGCTGGACGCTCGCCCCAGACCACGACG
GCACCGGCTCGGCCGTGGTCGAGGCCTCGGCCATCGACGCCAAGAGCCTGCGCGGCCCCCGAACGAACGCCCCGCCCGGC
AACGGACCGACCGGCACGGCCGCGCCCTCGGCGGCGGTGAGCCCCAGCCCGTCGCCGGTTCCGGCCGCCACCACCCAGGC
ACCGCCGACGTCACCGCCCGCACGCGCGCCGCAGGCCGCCGCCGTACCACCGCCGGCCGCGCCGGCGGCCCCGGCCGGCG
GTGGCGGCGGCCGGGTCCCCGGCGGGATGAGCGGCGTCTACGCGAACTCGATGGCCACGGTCCGCAACTGGGAGGGCCTG
CGCGGCTCACCGGTGAACGTCGTCCTGACCTTCGCCGACCGCGGCAGCTGGGGGACGATCACGCATCCGTGGCTCGGCAG
CGGCCCGGAGAAGTTCTCGACCTTCCCCGGCACCTGGGTCATCTCGCAGCCGTTCTTCCCGACCGGCCAGGGCAGCATCG
CGGCCTGCGGGTCCGGCGCCTACAACAGCCAGTGGGCGGAGTTCGGCCGGTGGCTGGTCGCCAAGGGCCGGCCGGCGTCC
ATCGTCCGGCTCGCCTGGGAGTTCAACGGCAACTGGTTCGAATGGTCGGTGCGCGGCAATCCCACCGCCTACGTGAACTG
CTTCCGCCAGGTCGTCAGCGCGATCCGGTCGACCGACCCGCAGGCCCGCATCGACTGGGCGATGAACGCCCACAGCACCA
GCCCGTGGGCGGCCTACCCGGGTGACGAGTACGTCGACATCATCGGGATCGACTCCTACGACCAGTGGCCCGCCAGCACC
ACCCCGGCGAAGTTCGACGAGCAGTGCAACCAGGCGGTGGGCCTGTGCTCGGCGATCCGCTTCGCCCGCCAGCACGGCAA
GCAGTTCTCCGTGCCCGAGTGGGGCCTCGTCGCGAAGTCCGACACCGAGGCGGGCCGGGCCGGGCAGGCCGGCGGTGACA
ACCCCGTGTACATCCAGAAGATGTACGACACCTTCCGGGCCAACGCCGACGTCCTGGCCTACGAGACGTACTTCAACGAC
TCGAGGGCCGGGAACGTCCACTCCTCGCTGGTCTCCCCCAACGAGAACCCGAACAGCGCGGGCACCTACGCGTCCCTCTG
GTAG

Upstream 100 bases:

>100_bases
GGGAGTCGTCCGCTTCGTCACGAAGCAGCGGGTGGGGATCGGGGGGTCCACAACGACACCGCCCGGCACGCCAGATGCCA
GGCACGGAGGGATATCCGCG

Downstream 100 bases:

>100_bases
CCGTCCCGCAGCGAAATGTGGCGGTTCAGAGAGTCCATGGACTCTCTGAACCGCCACATTTGTTTCGGCCGGCGCTCAGG
TGAGGGAGTAGGGGGTCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosidase; Beta-Mannanase; FHA Domain-Containing Protein

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MRHRAEGEPNPPNTRTGAHKRRRPTRNPAWIASLGVMALVAMAVGWTLAPDHDGTGSAVVEASAIDAKSLRGPRTNAPPG
NGPTGTAAPSAAVSPSPSPVPAATTQAPPTSPPARAPQAAAVPPPAAPAAPAGGGGGRVPGGMSGVYANSMATVRNWEGL
RGSPVNVVLTFADRGSWGTITHPWLGSGPEKFSTFPGTWVISQPFFPTGQGSIAACGSGAYNSQWAEFGRWLVAKGRPAS
IVRLAWEFNGNWFEWSVRGNPTAYVNCFRQVVSAIRSTDPQARIDWAMNAHSTSPWAAYPGDEYVDIIGIDSYDQWPAST
TPAKFDEQCNQAVGLCSAIRFARQHGKQFSVPEWGLVAKSDTEAGRAGQAGGDNPVYIQKMYDTFRANADVLAYETYFND
SRAGNVHSSLVSPNENPNSAGTYASLW

Sequences:

>Translated_427_residues
MRHRAEGEPNPPNTRTGAHKRRRPTRNPAWIASLGVMALVAMAVGWTLAPDHDGTGSAVVEASAIDAKSLRGPRTNAPPG
NGPTGTAAPSAAVSPSPSPVPAATTQAPPTSPPARAPQAAAVPPPAAPAAPAGGGGGRVPGGMSGVYANSMATVRNWEGL
RGSPVNVVLTFADRGSWGTITHPWLGSGPEKFSTFPGTWVISQPFFPTGQGSIAACGSGAYNSQWAEFGRWLVAKGRPAS
IVRLAWEFNGNWFEWSVRGNPTAYVNCFRQVVSAIRSTDPQARIDWAMNAHSTSPWAAYPGDEYVDIIGIDSYDQWPAST
TPAKFDEQCNQAVGLCSAIRFARQHGKQFSVPEWGLVAKSDTEAGRAGQAGGDNPVYIQKMYDTFRANADVLAYETYFND
SRAGNVHSSLVSPNENPNSAGTYASLW
>Mature_427_residues
MRHRAEGEPNPPNTRTGAHKRRRPTRNPAWIASLGVMALVAMAVGWTLAPDHDGTGSAVVEASAIDAKSLRGPRTNAPPG
NGPTGTAAPSAAVSPSPSPVPAATTQAPPTSPPARAPQAAAVPPPAAPAAPAGGGGGRVPGGMSGVYANSMATVRNWEGL
RGSPVNVVLTFADRGSWGTITHPWLGSGPEKFSTFPGTWVISQPFFPTGQGSIAACGSGAYNSQWAEFGRWLVAKGRPAS
IVRLAWEFNGNWFEWSVRGNPTAYVNCFRQVVSAIRSTDPQARIDWAMNAHSTSPWAAYPGDEYVDIIGIDSYDQWPAST
TPAKFDEQCNQAVGLCSAIRFARQHGKQFSVPEWGLVAKSDTEAGRAGQAGGDNPVYIQKMYDTFRANADVLAYETYFND
SRAGNVHSSLVSPNENPNSAGTYASLW

Specific function: Unknown

COG id: COG4124

COG function: function code G; Beta-mannanase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45071; Mature: 45071

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHRAEGEPNPPNTRTGAHKRRRPTRNPAWIASLGVMALVAMAVGWTLAPDHDGTGSAVV
CCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCCCCEEE
EASAIDAKSLRGPRTNAPPGNGPTGTAAPSAAVSPSPSPVPAATTQAPPTSPPARAPQAA
EECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AVPPPAAPAAPAGGGGGRVPGGMSGVYANSMATVRNWEGLRGSPVNVVLTFADRGSWGTI
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCC
THPWLGSGPEKFSTFPGTWVISQPFFPTGQGSIAACGSGAYNSQWAEFGRWLVAKGRPAS
CCCCCCCCHHHHCCCCCCEEEECCCCCCCCCCEEECCCCCCCCHHHHHCCEEEECCCCCE
IVRLAWEFNGNWFEWSVRGNPTAYVNCFRQVVSAIRSTDPQARIDWAMNAHSTSPWAAYP
EEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEECC
GDEYVDIIGIDSYDQWPASTTPAKFDEQCNQAVGLCSAIRFARQHGKQFSVPEWGLVAKS
CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECC
DTEAGRAGQAGGDNPVYIQKMYDTFRANADVLAYETYFNDSRAGNVHSSLVSPNENPNSA
CCCCCCCCCCCCCCCEEEHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCC
GTYASLW
CCEEECC
>Mature Secondary Structure
MRHRAEGEPNPPNTRTGAHKRRRPTRNPAWIASLGVMALVAMAVGWTLAPDHDGTGSAVV
CCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCCCCEEE
EASAIDAKSLRGPRTNAPPGNGPTGTAAPSAAVSPSPSPVPAATTQAPPTSPPARAPQAA
EECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AVPPPAAPAAPAGGGGGRVPGGMSGVYANSMATVRNWEGLRGSPVNVVLTFADRGSWGTI
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCC
THPWLGSGPEKFSTFPGTWVISQPFFPTGQGSIAACGSGAYNSQWAEFGRWLVAKGRPAS
CCCCCCCCHHHHCCCCCCEEEECCCCCCCCCCEEECCCCCCCCHHHHHCCEEEECCCCCE
IVRLAWEFNGNWFEWSVRGNPTAYVNCFRQVVSAIRSTDPQARIDWAMNAHSTSPWAAYP
EEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEECC
GDEYVDIIGIDSYDQWPASTTPAKFDEQCNQAVGLCSAIRFARQHGKQFSVPEWGLVAKS
CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECC
DTEAGRAGQAGGDNPVYIQKMYDTFRANADVLAYETYFNDSRAGNVHSSLVSPNENPNSA
CCCCCCCCCCCCCCCEEEHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCC
GTYASLW
CCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA