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The map label for this gene is desA1 [H]

Identifier: 158318240

GI number: 158318240

Start: 7912859

End: 7913815

Strand: Direct

Name: desA1 [H]

Synonym: Franean1_6505

Alternate gene names: 158318240

Gene position: 7912859-7913815 (Clockwise)

Preceding gene: 158318239

Following gene: 158318242

Centisome position: 88.1

GC content: 70.01

Gene sequence:

>957_bases
ATGGGATCACCTACGGACATCGATTTGTTGCGTGAGCTGGAACCGGTCGCCGAGACCAACGTCAACCGGCATCTCGGGCT
CGCCGCCGAGTGGATGCCGCACGAGTACGTGCCGTGGAGCCTGGGCCGCGACTTCGACACGACCCCGTGGGAGCCCGGCC
AGTCCTCGCTGTCCGAGGCCGCCCAGATGGCCTTCGAGGTCAACCTGCTCACCGAGGACAACCTGCCCAGCTATCACCGC
GAGATAGCCGTCGCGTTCGGCCGCGACGGCGCGTGGGGGACGTGGGTCGGGCGGTGGACCGCCGAGGAGGGCCGGCACGC
GATGGCCATGCGTGACTACCTCCTGGTGACCCGGGCGGTCGATCCTGTGACGCTCGAGCGTGACCGGATGCTGCAGATGC
AGCGCGGCTACGACTCCGGCGGCAAGACCCCGCTGGAGGCCATGGCCTACGTGTCGTTCCAGGAGCTGGCCACCCGGGTC
AGCCACCGCAACACCGGACGGGTCACCGGCGAGCCGATCGCCGAGAAGCTGCTCACCCGGGTGGCGGCGGACGAGAACCT
GCACATGATCTTCTACCGGAACCTGGTGGCCGCGGCGCTGGGCCTGACACCCGACCGCATGGTCCCGGTCATCCGCGACG
AGATCGTGAACTTCCAGATGCCCGGCACCGGCATCCGCGACTTCGGCCGCAAGGCCCGCTACATCGCCCAGGCGGGCATC
TACGACCTGCGGATCCATCACGACGACGTCGTCTCGCCCATCCTTCGGCACTGGAAGCTCCTCGAGCTGGAGGGGCTGTC
CGGCGAGGCCGCGAAGGCCCGCGACGAGATCGGCGCGTTCATGGCCGGCCTCGACGCACTGGCCACCCGGCAGGAGGAGA
AGAAGGCCGCCGCCCAGGCCCGCCGCGCGGCGCGCGAGGACCGCGAGCAGCAGACCGCGGCGGTTCCGGTCGGCTGA

Upstream 100 bases:

>100_bases
CGGTAGCCAGCCGGAACTGTTTCCAGGGAACAGATCCGTCCCTGGATTCCACACCCTGCGGCCATGGCGGCGAATCAAGG
CGCGATGGAAGAGTTCACCT

Downstream 100 bases:

>100_bases
GCCGGGGGAACAAGGGGGTACTGCTCGTAACTGCTGCCCGACATCCGTAGTGTCCGTGGCGTGTCGGCCGGATCATCCGG
TCGCATCAGCCCGACAACGG

Product: fatty acid desaturase type 2

Products: NA

Alternate protein names: DES; Putative acyl-ACP desaturase desA1 [H]

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MGSPTDIDLLRELEPVAETNVNRHLGLAAEWMPHEYVPWSLGRDFDTTPWEPGQSSLSEAAQMAFEVNLLTEDNLPSYHR
EIAVAFGRDGAWGTWVGRWTAEEGRHAMAMRDYLLVTRAVDPVTLERDRMLQMQRGYDSGGKTPLEAMAYVSFQELATRV
SHRNTGRVTGEPIAEKLLTRVAADENLHMIFYRNLVAAALGLTPDRMVPVIRDEIVNFQMPGTGIRDFGRKARYIAQAGI
YDLRIHHDDVVSPILRHWKLLELEGLSGEAAKARDEIGAFMAGLDALATRQEEKKAAAQARRAAREDREQQTAAVPVG

Sequences:

>Translated_318_residues
MGSPTDIDLLRELEPVAETNVNRHLGLAAEWMPHEYVPWSLGRDFDTTPWEPGQSSLSEAAQMAFEVNLLTEDNLPSYHR
EIAVAFGRDGAWGTWVGRWTAEEGRHAMAMRDYLLVTRAVDPVTLERDRMLQMQRGYDSGGKTPLEAMAYVSFQELATRV
SHRNTGRVTGEPIAEKLLTRVAADENLHMIFYRNLVAAALGLTPDRMVPVIRDEIVNFQMPGTGIRDFGRKARYIAQAGI
YDLRIHHDDVVSPILRHWKLLELEGLSGEAAKARDEIGAFMAGLDALATRQEEKKAAAQARRAAREDREQQTAAVPVG
>Mature_317_residues
GSPTDIDLLRELEPVAETNVNRHLGLAAEWMPHEYVPWSLGRDFDTTPWEPGQSSLSEAAQMAFEVNLLTEDNLPSYHRE
IAVAFGRDGAWGTWVGRWTAEEGRHAMAMRDYLLVTRAVDPVTLERDRMLQMQRGYDSGGKTPLEAMAYVSFQELATRVS
HRNTGRVTGEPIAEKLLTRVAADENLHMIFYRNLVAAALGLTPDRMVPVIRDEIVNFQMPGTGIRDFGRKARYIAQAGIY
DLRIHHDDVVSPILRHWKLLELEGLSGEAAKARDEIGAFMAGLDALATRQEEKKAAAQARRAAREDREQQTAAVPVG

Specific function: Could be involved in mycobacterial fatty acid biosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005067
- InterPro:   IPR009078
- InterPro:   IPR012348 [H]

Pfam domain/function: PF03405 FA_desaturase_2 [H]

EC number: NA

Molecular weight: Translated: 35588; Mature: 35457

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSPTDIDLLRELEPVAETNVNRHLGLAAEWMPHEYVPWSLGRDFDTTPWEPGQSSLSEA
CCCCCHHHHHHHHHHHHHCCCCHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AQMAFEVNLLTEDNLPSYHREIAVAFGRDGAWGTWVGRWTAEEGRHAMAMRDYLLVTRAV
HHHHHEEEEEECCCCCHHHHHEEEEECCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHCC
DPVTLERDRMLQMQRGYDSGGKTPLEAMAYVSFQELATRVSHRNTGRVTGEPIAEKLLTR
CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
VAADENLHMIFYRNLVAAALGLTPDRMVPVIRDEIVNFQMPGTGIRDFGRKARYIAQAGI
HHCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
YDLRIHHDDVVSPILRHWKLLELEGLSGEAAKARDEIGAFMAGLDALATRQEEKKAAAQA
EEEEECCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRAAREDREQQTAAVPVG
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GSPTDIDLLRELEPVAETNVNRHLGLAAEWMPHEYVPWSLGRDFDTTPWEPGQSSLSEA
CCCCHHHHHHHHHHHHHCCCCHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AQMAFEVNLLTEDNLPSYHREIAVAFGRDGAWGTWVGRWTAEEGRHAMAMRDYLLVTRAV
HHHHHEEEEEECCCCCHHHHHEEEEECCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHCC
DPVTLERDRMLQMQRGYDSGGKTPLEAMAYVSFQELATRVSHRNTGRVTGEPIAEKLLTR
CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
VAADENLHMIFYRNLVAAALGLTPDRMVPVIRDEIVNFQMPGTGIRDFGRKARYIAQAGI
HHCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
YDLRIHHDDVVSPILRHWKLLELEGLSGEAAKARDEIGAFMAGLDALATRQEEKKAAAQA
EEEEECCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRAAREDREQQTAAVPVG
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12368430; 12218036 [H]