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The map label for this gene is ycdQ [C]

Identifier: 158318235

GI number: 158318235

Start: 7903837

End: 7905327

Strand: Direct

Name: ycdQ [C]

Synonym: Franean1_6500

Alternate gene names: 158318235

Gene position: 7903837-7905327 (Clockwise)

Preceding gene: 158318234

Following gene: 158318238

Centisome position: 88.0

GC content: 74.51

Gene sequence:

>1491_bases
GTGACGGCCACCCGCTCCGCCGAGGCCGAGCGGACCGACCTGGTGCCCAGGCCGCGGGTCGGGCTGCTCCCGGCCGGCCA
GCCCGTGCTCGACGTGGTCGTCCCGGTCTACAACGAGGAGAACGACCTGGCGCCCTGCGTGCGCCGGCTGCACGCCCACC
TGCGGGGGGCCTTTCCCTATCCGTTCCGGATCACAGTCGCGGACAACGCCAGCACCGACACCACGCTGGCCATCGCCCGA
GCGTTGACGGAGGAGCTTCCCGAGGTCTCGGTGATCCACCTGGAGGCCAAGGGACGCGGCCGCGCGCTGCGCGCTGCCTG
GGGCGCCTCCACCGCACCCGTCCTGGCCTACATGGACGTCGACCTCTCGACGGACCTGGCCGCGCTGCTCCCCCTGGTCG
CTCCGCTGATCTCCGGGCATTCCGACCTGGCGATCGGGACCAGGCTCGCGCCGTCGTCCCGGGTCGTACGCGGGCCGAAG
CGGGAGGTGATCTCCCGCTGTTACAACCTGCTGCTGCGCGGCACCCTCGCCGCCCGCTTCACCGATGCCCAGTGCGGTTT
CAAGGCCATCCGCGCGGACGTCGCCGCGAGCCTGCTGCCCCTGGTGCAGGACACCGGGTGGTTCTTCGACACGGAGATGC
TGGTCATCGCCGAGCGGTGCGGCCTGCGCATCCACGAGGTCCCGGTGGACTGGGTCGACGACCCGGACAGCCGGGTGGAC
GTACTCGCGACCGCGATGGCGGACCTGAAGGGCGTCGCCCGGCTCGCCCGGGCGCTGGGGACGGGCGCCCTGCCCGTCGC
GCAGCTGCGCCACGAGTTCGGACGGGCTCCGCTGACCTGGACAGGCGCCGCGGGTGCGGGCGGGACCGCCAGACCCACAG
CGACGACGACTGGAGCCGGAGTGCAGGGAGGAATGCCCGAGGCCACCGGGCCCGGAGCCGCAGAAGCCGCGGCCACCGGA
TCGGTGGCGCCCGGATCCGCGGTGACCGGAGTGCCGGCCGGGCTGACCGGACAGCTGCTGCGGTTCGCCGGGGTGGGGAT
CGCCAGCACACTGGCCTACCTGGTGCTGTTCGTGCTGCTGCGCACCGCGACCGGGGCCCAGGCCGCGAACCTGATCGCGC
TGCTGGTGACGGCGGTCGCGAACACGGCCGCCAACCGCCGGCTCACCTTCGGGGTCACCGGCCGCGGCGACGCCGGCCGC
CATCACCTGCAGGGGCTGTTCGTCTTCGCCATCGGGCTGCTCCTGACCAGCGGCTCGCTGGCCGCGCTGCACGCGGCGAG
CGACTCCCCGGGGCGGTTCCCGGAGGTCAGCGTGCTCGTGCTGGCGAACCTGGCGTCGACGGTGGTCCGGTTCCTGCTGA
TGCGCGCCTGGGTGTTCCACCCGTCCCGGCTGCGCCGCCCGGCCGGCGGGGCGACCCCGTCAGCGGACGGCGGCCTGGGC
CGCCCGGGCGACGTCCCGGGCCGCTCCGGGCACGGCGCGCACCGGCTCTGA

Upstream 100 bases:

>100_bases
GGCACAGGGATGGCACACGCCGGGCACAGGCCCCGGGCGGACCGTGAACAACATGACGACGGATGCCAGGACCAGCGACA
GCAGGGTGACCAGCTCCCAC

Downstream 100 bases:

>100_bases
GGCCCCGGTGCCCCGTCCGCCGGGTGCCGGCGGACGGGGTCCGGAGGACGGTCAGGGGCGCAGGATCAGGAGGAGGTCGC
CGACCTCTACGGATTCGCCG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyl Transferase; Dolichyl-Phosphate Beta-Glucosyltransferase; Glycosyltransferase; Glycosyl Transferase Family 2 Protein; Dolichol-P-Glucose Synthetase; GtrA Family Protein; Dolichol-Phosphate Mannosyltransferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Family 2 Glycosyltransferase; Family 2 Glycosyl Transferase Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase GT2 Family Protein; Glycosyltransferase AglD; Glycolsyltransferase; Gtra-Like Glycosyl Transferase; Family Glycosyltransferase; Glycosyltransferase D; Group 2 Family Glycosyl Transferase; Polyprenol-Phosphate Glycosyltransferase; Polysaccharide Biosynthesis Protein; Glycosyl Transferase Group 2 Family; Polyprenol Phosphate Mannosyl Transferase; Cell Wall Biogenesis Glycosyltransferase-Like Protein; Glycosyl Transferase Group 2 Family Protein

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MTATRSAEAERTDLVPRPRVGLLPAGQPVLDVVVPVYNEENDLAPCVRRLHAHLRGAFPYPFRITVADNASTDTTLAIAR
ALTEELPEVSVIHLEAKGRGRALRAAWGASTAPVLAYMDVDLSTDLAALLPLVAPLISGHSDLAIGTRLAPSSRVVRGPK
REVISRCYNLLLRGTLAARFTDAQCGFKAIRADVAASLLPLVQDTGWFFDTEMLVIAERCGLRIHEVPVDWVDDPDSRVD
VLATAMADLKGVARLARALGTGALPVAQLRHEFGRAPLTWTGAAGAGGTARPTATTTGAGVQGGMPEATGPGAAEAAATG
SVAPGSAVTGVPAGLTGQLLRFAGVGIASTLAYLVLFVLLRTATGAQAANLIALLVTAVANTAANRRLTFGVTGRGDAGR
HHLQGLFVFAIGLLLTSGSLAALHAASDSPGRFPEVSVLVLANLASTVVRFLLMRAWVFHPSRLRRPAGGATPSADGGLG
RPGDVPGRSGHGAHRL

Sequences:

>Translated_496_residues
MTATRSAEAERTDLVPRPRVGLLPAGQPVLDVVVPVYNEENDLAPCVRRLHAHLRGAFPYPFRITVADNASTDTTLAIAR
ALTEELPEVSVIHLEAKGRGRALRAAWGASTAPVLAYMDVDLSTDLAALLPLVAPLISGHSDLAIGTRLAPSSRVVRGPK
REVISRCYNLLLRGTLAARFTDAQCGFKAIRADVAASLLPLVQDTGWFFDTEMLVIAERCGLRIHEVPVDWVDDPDSRVD
VLATAMADLKGVARLARALGTGALPVAQLRHEFGRAPLTWTGAAGAGGTARPTATTTGAGVQGGMPEATGPGAAEAAATG
SVAPGSAVTGVPAGLTGQLLRFAGVGIASTLAYLVLFVLLRTATGAQAANLIALLVTAVANTAANRRLTFGVTGRGDAGR
HHLQGLFVFAIGLLLTSGSLAALHAASDSPGRFPEVSVLVLANLASTVVRFLLMRAWVFHPSRLRRPAGGATPSADGGLG
RPGDVPGRSGHGAHRL
>Mature_495_residues
TATRSAEAERTDLVPRPRVGLLPAGQPVLDVVVPVYNEENDLAPCVRRLHAHLRGAFPYPFRITVADNASTDTTLAIARA
LTEELPEVSVIHLEAKGRGRALRAAWGASTAPVLAYMDVDLSTDLAALLPLVAPLISGHSDLAIGTRLAPSSRVVRGPKR
EVISRCYNLLLRGTLAARFTDAQCGFKAIRADVAASLLPLVQDTGWFFDTEMLVIAERCGLRIHEVPVDWVDDPDSRVDV
LATAMADLKGVARLARALGTGALPVAQLRHEFGRAPLTWTGAAGAGGTARPTATTTGAGVQGGMPEATGPGAAEAAATGS
VAPGSAVTGVPAGLTGQLLRFAGVGIASTLAYLVLFVLLRTATGAQAANLIALLVTAVANTAANRRLTFGVTGRGDAGRH
HLQGLFVFAIGLLLTSGSLAALHAASDSPGRFPEVSVLVLANLASTVVRFLLMRAWVFHPSRLRRPAGGATPSADGGLGR
PGDVPGRSGHGAHRL

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI71999402, Length=210, Percent_Identity=26.1904761904762, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25146207, Length=226, Percent_Identity=26.5486725663717, Blast_Score=77, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6325029, Length=261, Percent_Identity=25.6704980842912, Blast_Score=77, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24585265, Length=216, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24582769, Length=226, Percent_Identity=27.8761061946903, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51426; Mature: 51295

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATRSAEAERTDLVPRPRVGLLPAGQPVLDVVVPVYNEENDLAPCVRRLHAHLRGAFPY
CCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCC
PFRITVADNASTDTTLAIARALTEELPEVSVIHLEAKGRGRALRAAWGASTAPVLAYMDV
CEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCCCEEEEEEC
DLSTDLAALLPLVAPLISGHSDLAIGTRLAPSSRVVRGPKREVISRCYNLLLRGTLAARF
CCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHC
TDAQCGFKAIRADVAASLLPLVQDTGWFFDTEMLVIAERCGLRIHEVPVDWVDDPDSRVD
CCHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHCCEEEECCCCCCCCCCHHHH
VLATAMADLKGVARLARALGTGALPVAQLRHEFGRAPLTWTGAAGAGGTARPTATTTGAG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCC
VQGGMPEATGPGAAEAAATGSVAPGSAVTGVPAGLTGQLLRFAGVGIASTLAYLVLFVLL
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
RTATGAQAANLIALLVTAVANTAANRRLTFGVTGRGDAGRHHLQGLFVFAIGLLLTSGSL
HHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
AALHAASDSPGRFPEVSVLVLANLASTVVRFLLMRAWVFHPSRLRRPAGGATPSADGGLG
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCC
RPGDVPGRSGHGAHRL
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TATRSAEAERTDLVPRPRVGLLPAGQPVLDVVVPVYNEENDLAPCVRRLHAHLRGAFPY
CCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCC
PFRITVADNASTDTTLAIARALTEELPEVSVIHLEAKGRGRALRAAWGASTAPVLAYMDV
CEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCCCEEEEEEC
DLSTDLAALLPLVAPLISGHSDLAIGTRLAPSSRVVRGPKREVISRCYNLLLRGTLAARF
CCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHC
TDAQCGFKAIRADVAASLLPLVQDTGWFFDTEMLVIAERCGLRIHEVPVDWVDDPDSRVD
CCHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHCCEEEECCCCCCCCCCHHHH
VLATAMADLKGVARLARALGTGALPVAQLRHEFGRAPLTWTGAAGAGGTARPTATTTGAG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCC
VQGGMPEATGPGAAEAAATGSVAPGSAVTGVPAGLTGQLLRFAGVGIASTLAYLVLFVLL
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
RTATGAQAANLIALLVTAVANTAANRRLTFGVTGRGDAGRHHLQGLFVFAIGLLLTSGSL
HHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
AALHAASDSPGRFPEVSVLVLANLASTVVRFLLMRAWVFHPSRLRRPAGGATPSADGGLG
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCC
RPGDVPGRSGHGAHRL
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA