| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318218
Identifier: 158318218
GI number: 158318218
Start: 7881303
End: 7882808
Strand: Direct
Name: 158318218
Synonym: Franean1_6483
Alternate gene names: NA
Gene position: 7881303-7882808 (Clockwise)
Preceding gene: 158318217
Following gene: 158318219
Centisome position: 87.75
GC content: 78.69
Gene sequence:
>1506_bases ATGGGAACGATGTCCCGCAGACGCTCCGCACGCGGCCCGCGCCGCGGCCCGCCTCGCCCGGCGGGCCGTTCCGGGCCGGC GGGAGCCGCGGAACGCCACGAGTCACCGCCGGCGGCGGGTCACAACGACCCGCCGCCGGCGCGGCACGACCCGCCGCAGG CGCGGCTCCTGGTGGCGGCGGTCTGCGTCCTGGCGATGGCGGCGCTGGGCCTCGGGCTCTTCTCCGATGTCCTGACCCGG CACGTCCTGACCCTCGGCCCTGGCCGGGCCGGTGGCCCGCCGCCCGCAGGCAGCGGCGGGGGGCCACCCACGCGGGGCGC CACGACGGAAGAGGCGGAACAGCCCCCCTGGGGCGCTGCGACCGGTCAGCGGCCGGGGCCGGTGTGGCCACCGCGGGCCG GCAGCCCGTCCGATGCCGGGGACACGACCGAGCTCACCCTGACCTTCAGCGGCGATCTGGTCCTCGACCCGTCCAGCGCC CGCGCGGCGCTGGCACCGCTCGGCAGCCTGTTGTCCTCCGCCGACCTCGCGATCTGCCGCGGGCCGGCTCCCACCGCCCA CCCGGAGGTCATCGCCGAGGCCCTGCGGCGGGTGGGCTTCGGCGCGTGCGCCACCGCGTCCGGCCGGGCGGCCCGGCTGG GCGGTGCTGGGGTGCGCGGCCTGCTGGACGCCCTCGACGGCGCGGCGATCGACCACAGCGGCACGGCCCGCGAGCCGCTG GACGCCGCCACCCTGTCGCTGCTGCCCGTGCGCGGCGCGCAGATCTCGCTGCTGTCCTACACCGAGGACGCCGGCACCGA CCCCGCTCCCGGCTCACCCGGAGCGGACCCGCCCGGCTGGACGGTCAACGAGCTGGACCCGGCGCGGATCCTGCGGGACG CCGCCCGCGCCCGCCAGGCCGGCGCCGACCTCGTCGTGGTCGCGCTGTCCTGGGCCCCCGACCAGGCCGAATCCGCGCGG AGCGCGCCGACGGGAACAGCGCCCACGGGGACGGCTCCGACGCAGCGGCAGCGGATGACCGCGCGCGAGCTGCTCCGCTC CCCGCTCGTTGACCTGGTCGTGGGCACCAGCGCCGGCACGGTGCGGCCGGTCGAACGCGTCGACGGCAAGTACGTCGCCT ACGGGACGGGCTCGATCACCATCCCGGCAGCGGGCGGCCTCAGCGGCGGTGCCGGCGGCGTCCCTGGCGGGGAAGCAGGC GCCGAACCGGGCGTGGACGCCGCCGGGCGGGACCGGGAGCGGGACGGCGCGCTCCTGCACGCCCGGGTACGGCGCACGGC GCTCGGCTGGATGGTCGTCGGTCTCACCTACAGCCCGATCTGGACGGGGCCGGACGGCGTCGTCCGCCCGGTAGCGGACG CCCTCGACGACCCGGGCACGTCCGAGGCGGCACGGGCCGAGCTGACGGTGTCCTGGCTGCGCACCGTGGCCGCGCTGACC TCGCTGGGGCAGGTCGACGGGGTCCGTCCGGAACGGGTGCCGCGCCAGCCCGGGGCCGGTGCCTGA
Upstream 100 bases:
>100_bases ACAAGATCCGATCAGCACCGGATCCAGCTACTAAAAGTAGTGAGGCCAACACCCATCGCCTAGGTTGAGAGGGGTCCGCC CCTCCGATCAGGCCCAGGCG
Downstream 100 bases:
>100_bases CGCCCGGTGCCGATCGGCTTCCTCCGCATCCGGCCCAACATCGGAGTGAGCGGTTACTTTGGCCTCCAAGCTGTCGAATC TGGGCCGCAGTACCGCTACC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MGTMSRRRSARGPRRGPPRPAGRSGPAGAAERHESPPAAGHNDPPPARHDPPQARLLVAAVCVLAMAALGLGLFSDVLTR HVLTLGPGRAGGPPPAGSGGGPPTRGATTEEAEQPPWGAATGQRPGPVWPPRAGSPSDAGDTTELTLTFSGDLVLDPSSA RAALAPLGSLLSSADLAICRGPAPTAHPEVIAEALRRVGFGACATASGRAARLGGAGVRGLLDALDGAAIDHSGTAREPL DAATLSLLPVRGAQISLLSYTEDAGTDPAPGSPGADPPGWTVNELDPARILRDAARARQAGADLVVVALSWAPDQAESAR SAPTGTAPTGTAPTQRQRMTARELLRSPLVDLVVGTSAGTVRPVERVDGKYVAYGTGSITIPAAGGLSGGAGGVPGGEAG AEPGVDAAGRDRERDGALLHARVRRTALGWMVVGLTYSPIWTGPDGVVRPVADALDDPGTSEAARAELTVSWLRTVAALT SLGQVDGVRPERVPRQPGAGA
Sequences:
>Translated_501_residues MGTMSRRRSARGPRRGPPRPAGRSGPAGAAERHESPPAAGHNDPPPARHDPPQARLLVAAVCVLAMAALGLGLFSDVLTR HVLTLGPGRAGGPPPAGSGGGPPTRGATTEEAEQPPWGAATGQRPGPVWPPRAGSPSDAGDTTELTLTFSGDLVLDPSSA RAALAPLGSLLSSADLAICRGPAPTAHPEVIAEALRRVGFGACATASGRAARLGGAGVRGLLDALDGAAIDHSGTAREPL DAATLSLLPVRGAQISLLSYTEDAGTDPAPGSPGADPPGWTVNELDPARILRDAARARQAGADLVVVALSWAPDQAESAR SAPTGTAPTGTAPTQRQRMTARELLRSPLVDLVVGTSAGTVRPVERVDGKYVAYGTGSITIPAAGGLSGGAGGVPGGEAG AEPGVDAAGRDRERDGALLHARVRRTALGWMVVGLTYSPIWTGPDGVVRPVADALDDPGTSEAARAELTVSWLRTVAALT SLGQVDGVRPERVPRQPGAGA >Mature_500_residues GTMSRRRSARGPRRGPPRPAGRSGPAGAAERHESPPAAGHNDPPPARHDPPQARLLVAAVCVLAMAALGLGLFSDVLTRH VLTLGPGRAGGPPPAGSGGGPPTRGATTEEAEQPPWGAATGQRPGPVWPPRAGSPSDAGDTTELTLTFSGDLVLDPSSAR AALAPLGSLLSSADLAICRGPAPTAHPEVIAEALRRVGFGACATASGRAARLGGAGVRGLLDALDGAAIDHSGTAREPLD AATLSLLPVRGAQISLLSYTEDAGTDPAPGSPGADPPGWTVNELDPARILRDAARARQAGADLVVVALSWAPDQAESARS APTGTAPTGTAPTQRQRMTARELLRSPLVDLVVGTSAGTVRPVERVDGKYVAYGTGSITIPAAGGLSGGAGGVPGGEAGA EPGVDAAGRDRERDGALLHARVRRTALGWMVVGLTYSPIWTGPDGVVRPVADALDDPGTSEAARAELTVSWLRTVAALTS LGQVDGVRPERVPRQPGAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50408; Mature: 50277
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTMSRRRSARGPRRGPPRPAGRSGPAGAAERHESPPAAGHNDPPPARHDPPQARLLVAA CCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH VCVLAMAALGLGLFSDVLTRHVLTLGPGRAGGPPPAGSGGGPPTRGATTEEAEQPPWGAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC TGQRPGPVWPPRAGSPSDAGDTTELTLTFSGDLVLDPSSARAALAPLGSLLSSADLAICR CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCHHHHHHHHHHHHHCCCEEEEC GPAPTAHPEVIAEALRRVGFGACATASGRAARLGGAGVRGLLDALDGAAIDHSGTAREPL CCCCCCCHHHHHHHHHHCCCCCEECCCCCEECCCCHHHHHHHHHHCCCCCCCCCCCCCCH DAATLSLLPVRGAQISLLSYTEDAGTDPAPGSPGADPPGWTVNELDPARILRDAARARQA HHHHHHEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GADLVVVALSWAPDQAESARSAPTGTAPTGTAPTQRQRMTARELLRSPLVDLVVGTSAGT CCCEEEEEEECCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHEEECCCCCC VRPVERVDGKYVAYGTGSITIPAAGGLSGGAGGVPGGEAGAEPGVDAAGRDRERDGALLH CCHHHHCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH ARVRRTALGWMVVGLTYSPIWTGPDGVVRPVADALDDPGTSEAARAELTVSWLRTVAALT HHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH SLGQVDGVRPERVPRQPGAGA HHHHHCCCCHHHCCCCCCCCC >Mature Secondary Structure GTMSRRRSARGPRRGPPRPAGRSGPAGAAERHESPPAAGHNDPPPARHDPPQARLLVAA CCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH VCVLAMAALGLGLFSDVLTRHVLTLGPGRAGGPPPAGSGGGPPTRGATTEEAEQPPWGAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC TGQRPGPVWPPRAGSPSDAGDTTELTLTFSGDLVLDPSSARAALAPLGSLLSSADLAICR CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCHHHHHHHHHHHHHCCCEEEEC GPAPTAHPEVIAEALRRVGFGACATASGRAARLGGAGVRGLLDALDGAAIDHSGTAREPL CCCCCCCHHHHHHHHHHCCCCCEECCCCCEECCCCHHHHHHHHHHCCCCCCCCCCCCCCH DAATLSLLPVRGAQISLLSYTEDAGTDPAPGSPGADPPGWTVNELDPARILRDAARARQA HHHHHHEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GADLVVVALSWAPDQAESARSAPTGTAPTGTAPTQRQRMTARELLRSPLVDLVVGTSAGT CCCEEEEEEECCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHEEECCCCCC VRPVERVDGKYVAYGTGSITIPAAGGLSGGAGGVPGGEAGAEPGVDAAGRDRERDGALLH CCHHHHCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH ARVRRTALGWMVVGLTYSPIWTGPDGVVRPVADALDDPGTSEAARAELTVSWLRTVAALT HHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH SLGQVDGVRPERVPRQPGAGA HHHHHCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA