| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318201
Identifier: 158318201
GI number: 158318201
Start: 7859752
End: 7860456
Strand: Direct
Name: 158318201
Synonym: Franean1_6466
Alternate gene names: NA
Gene position: 7859752-7860456 (Clockwise)
Preceding gene: 158318198
Following gene: 158318203
Centisome position: 87.51
GC content: 71.77
Gene sequence:
>705_bases ATGGCCGTCATGCGCACGCTCACCGAGGACGACATCCTCACCGAGGATGACCTGGACGAGATCGTCATCGAGGCCGCGGG CGACGGCCGCCACCGGCAGGCCGCGGCACAGTTCGAGGATCTCGCCGCGCGGCCTGAGCTCCACGGCCAGGTCAGCGCGT CGATGCTGCTGGTCCACGCCGGCGGCCAGTACGGCCTCGCCGACGACTGGGACGAGGCGGTGCGCTGCTACCGCGCTGCC GTGGTCGCCAACGACACAGCGGCCGCCGGTTCGGTGGCCGCCGCGGCAGCGGCCGCCATGGCGGCGGATGACCCGGCGGC GGATGACGCGACGGATGACGCGGCAGCCGGCGTGGCGGACATCGACCCGCGGGTCTGGCTGCATGACGCGCTCGTGCGCA AGGGCGACGAGGCCGAGGCCACGACGCTGCGCGCCGAGATCAAGTCGAGCCGCTCCACGAATCCGGATGTGTACGCGGCG GTCGCGGAGACGCTCGCGGAGCACGGCCGGCAGCAGGAGGCGCTCACCTGGTTCACGATGGGCTTCCACCGCTGCCAGGA CGCGGATGTCCCGGTCTACATGCTCCACCTGCTGCTGATCGGGCGCCGCGCGATACGCAGGAACCTCGGCTTCCCGCCGG ACGAGCTGGACGAGATCGCCGACGCCTACGTCGACCACCTGGAGGCCACCGACAACCTCGCTTGA
Upstream 100 bases:
>100_bases CCCGCCGAACCAGCCCGGAACCCGATGGTCCGGCGGCGTCTGCGCCCCCCTGTGGCCTCCTCATCCCCGGTCGTCCGGGA CGGGTGGCGGGCGGAGAACA
Downstream 100 bases:
>100_bases CCCGATCAGGCCTCCCACAGCATCGCCCGACCTGGTCAGGTGTCTGGCAGCCTCCCCGGGCTCGATCAGGCGTCCGGGAG GAGGACGGGGCGCAGGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MAVMRTLTEDDILTEDDLDEIVIEAAGDGRHRQAAAQFEDLAARPELHGQVSASMLLVHAGGQYGLADDWDEAVRCYRAA VVANDTAAAGSVAAAAAAAMAADDPAADDATDDAAAGVADIDPRVWLHDALVRKGDEAEATTLRAEIKSSRSTNPDVYAA VAETLAEHGRQQEALTWFTMGFHRCQDADVPVYMLHLLLIGRRAIRRNLGFPPDELDEIADAYVDHLEATDNLA
Sequences:
>Translated_234_residues MAVMRTLTEDDILTEDDLDEIVIEAAGDGRHRQAAAQFEDLAARPELHGQVSASMLLVHAGGQYGLADDWDEAVRCYRAA VVANDTAAAGSVAAAAAAAMAADDPAADDATDDAAAGVADIDPRVWLHDALVRKGDEAEATTLRAEIKSSRSTNPDVYAA VAETLAEHGRQQEALTWFTMGFHRCQDADVPVYMLHLLLIGRRAIRRNLGFPPDELDEIADAYVDHLEATDNLA >Mature_233_residues AVMRTLTEDDILTEDDLDEIVIEAAGDGRHRQAAAQFEDLAARPELHGQVSASMLLVHAGGQYGLADDWDEAVRCYRAAV VANDTAAAGSVAAAAAAAMAADDPAADDATDDAAAGVADIDPRVWLHDALVRKGDEAEATTLRAEIKSSRSTNPDVYAAV AETLAEHGRQQEALTWFTMGFHRCQDADVPVYMLHLLLIGRRAIRRNLGFPPDELDEIADAYVDHLEATDNLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25092; Mature: 24961
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVMRTLTEDDILTEDDLDEIVIEAAGDGRHRQAAAQFEDLAARPELHGQVSASMLLVHA CCHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHEEEEEEC GGQYGLADDWDEAVRCYRAAVVANDTAAAGSVAAAAAAAMAADDPAADDATDDAAAGVAD CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC IDPRVWLHDALVRKGDEAEATTLRAEIKSSRSTNPDVYAAVAETLAEHGRQQEALTWFTM CCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH GFHRCQDADVPVYMLHLLLIGRRAIRRNLGFPPDELDEIADAYVDHLEATDNLA HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AVMRTLTEDDILTEDDLDEIVIEAAGDGRHRQAAAQFEDLAARPELHGQVSASMLLVHA CHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHEEEEEEC GGQYGLADDWDEAVRCYRAAVVANDTAAAGSVAAAAAAAMAADDPAADDATDDAAAGVAD CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC IDPRVWLHDALVRKGDEAEATTLRAEIKSSRSTNPDVYAAVAETLAEHGRQQEALTWFTM CCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH GFHRCQDADVPVYMLHLLLIGRRAIRRNLGFPPDELDEIADAYVDHLEATDNLA HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA