| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318172
Identifier: 158318172
GI number: 158318172
Start: 7826066
End: 7826899
Strand: Direct
Name: 158318172
Synonym: Franean1_6437
Alternate gene names: NA
Gene position: 7826066-7826899 (Clockwise)
Preceding gene: 158318171
Following gene: 158318175
Centisome position: 87.13
GC content: 76.74
Gene sequence:
>834_bases GTGCCTCATCCTCAGCGGCGCGTCCACCGACCCGGCGCCGGACGACGTCGCCGTGCTCCTCAAGCCGTTCCGGGCGGACG ACCTGCTCGACGCGGTGAACAGGCTCTCGGGCCGGCCCACGGTCGACGGCGACCCGCCGGGCGGTGGGCGCCGGCGGCGG ACCGGATGACCCAGTCCGGGACGGCCGGCGACGCGCGTGTCGCCGACCGTCTGATGTTCCTCATGATCGCGCTCCAGGAG CGCGCGAACCGGGCCCTCGTCGAGGAGCTGCACGACGGGCCGATGCAGGAGCTCACCGGCATCCTGCTGTCGCTGGCGAG CCTGCGCCGGGGCCTGCCGGCCGAGGCCGCCGCGCAGATCACCCAGATCGAGACCCGCCTGCGCGACGCCGCCGCCGCGC TGCACCGGCCCCAGCCGCCGTTCCGCACCGGCAACGGCCCCCGGCAGATGCTCGAGCTCGGCCTGACCCAGCGGGTGGAG GGGGTCCTCGTCGACCGGCTCTACACCAGCCTGGACATCGACGTCGCCCCGCCCGCGCTCGCGGAGGTCACCGTCGTGCT GGCGACCGTCCAGCTCCTGCTGCAGGAGAGCGACCCGCTGGAGCGCCCGGCGCGTGCGCTGGTGGCGGTGCGGAGCAGTG CCGAGCATGTCGAGCTGGCCCTGCGAGTCGCCTACGCCGACGGCTTCCGCCCCGACGCCGCGACGGCGGGCCGGCTGGAG CGGCTGCGGCAGGTCGCGGACGTCCTCGGCGCCCGGCTGAGCCCGGACGCGGTCACCAGCGCGTGGTCCGCGGCGGTGCG GCTGCCGCGGGCGCCGTCCCAGGCGGGCGGGTAG
Upstream 100 bases:
>100_bases TCGACTTCGACGCGCTGGTCATCGACACGCGGCTCGGCGCCGAGCGGGGCACCGAGCTGCTCGCCGCCCTGCGGCTCGAC GATCCGCTGGTGCCGCGCCG
Downstream 100 bases:
>100_bases GCGCCGTCAGCTGTCGCGGGGCCAGGGCGGCGCGCCGTGCGGGGAGAAAGGGCCGCTGAGGGAATCCAGAACCTCCCGCA CCTTCGACAGCAGCACCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MPHPQRRVHRPGAGRRRRAPQAVPGGRPARRGEQALGPAHGRRRPAGRWAPAADRMTQSGTAGDARVADRLMFLMIALQE RANRALVEELHDGPMQELTGILLSLASLRRGLPAEAAAQITQIETRLRDAAAALHRPQPPFRTGNGPRQMLELGLTQRVE GVLVDRLYTSLDIDVAPPALAEVTVVLATVQLLLQESDPLERPARALVAVRSSAEHVELALRVAYADGFRPDAATAGRLE RLRQVADVLGARLSPDAVTSAWSAAVRLPRAPSQAGG
Sequences:
>Translated_277_residues MPHPQRRVHRPGAGRRRRAPQAVPGGRPARRGEQALGPAHGRRRPAGRWAPAADRMTQSGTAGDARVADRLMFLMIALQE RANRALVEELHDGPMQELTGILLSLASLRRGLPAEAAAQITQIETRLRDAAAALHRPQPPFRTGNGPRQMLELGLTQRVE GVLVDRLYTSLDIDVAPPALAEVTVVLATVQLLLQESDPLERPARALVAVRSSAEHVELALRVAYADGFRPDAATAGRLE RLRQVADVLGARLSPDAVTSAWSAAVRLPRAPSQAGG >Mature_276_residues PHPQRRVHRPGAGRRRRAPQAVPGGRPARRGEQALGPAHGRRRPAGRWAPAADRMTQSGTAGDARVADRLMFLMIALQER ANRALVEELHDGPMQELTGILLSLASLRRGLPAEAAAQITQIETRLRDAAAALHRPQPPFRTGNGPRQMLELGLTQRVEG VLVDRLYTSLDIDVAPPALAEVTVVLATVQLLLQESDPLERPARALVAVRSSAEHVELALRVAYADGFRPDAATAGRLER LRQVADVLGARLSPDAVTSAWSAAVRLPRAPSQAGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29840; Mature: 29708
Theoretical pI: Translated: 11.91; Mature: 11.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPQRRVHRPGAGRRRRAPQAVPGGRPARRGEQALGPAHGRRRPAGRWAPAADRMTQSG CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHCCC TAGDARVADRLMFLMIALQERANRALVEELHDGPMQELTGILLSLASLRRGLPAEAAAQI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH TQIETRLRDAAAALHRPQPPFRTGNGPRQMLELGLTQRVEGVLVDRLYTSLDIDVAPPAL HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AEVTVVLATVQLLLQESDPLERPARALVAVRSSAEHVELALRVAYADGFRPDAATAGRLE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHH RLRQVADVLGARLSPDAVTSAWSAAVRLPRAPSQAGG HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PHPQRRVHRPGAGRRRRAPQAVPGGRPARRGEQALGPAHGRRRPAGRWAPAADRMTQSG CCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHCCC TAGDARVADRLMFLMIALQERANRALVEELHDGPMQELTGILLSLASLRRGLPAEAAAQI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH TQIETRLRDAAAALHRPQPPFRTGNGPRQMLELGLTQRVEGVLVDRLYTSLDIDVAPPAL HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AEVTVVLATVQLLLQESDPLERPARALVAVRSSAEHVELALRVAYADGFRPDAATAGRLE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHH RLRQVADVLGARLSPDAVTSAWSAAVRLPRAPSQAGG HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA