| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cysE [H]
Identifier: 158318164
GI number: 158318164
Start: 7810404
End: 7810979
Strand: Reverse
Name: cysE [H]
Synonym: Franean1_6429
Alternate gene names: 158318164
Gene position: 7810979-7810404 (Counterclockwise)
Preceding gene: 158318165
Following gene: 158318163
Centisome position: 86.96
GC content: 72.4
Gene sequence:
>576_bases ATGTCGGCTGAGCCCCGCACGGCCGAGCCCGCGGCGGCCGGGTCGCGGGGCGCGCCGCTCTCGCTGCGGGCGCAGTTGCG CGAGGACAGGGACGTCCACTACGGGGCGCGGCTGCACCCGGGCTACCAGGCGCTCGCCGTCCACCGGTTCGGCCGGTGGT GCCGCGAGCGCGGCGGGCTGGTCGGCAGGTTCGGCACGATCGCCTTCAAGGCCGTGAACAACATCGTCATCCGCAACCTC CAGGGCACCGAGATCTCCGTCGACGCCAGCATCGGACGTCGCGTCCTGATCGGGCATCACCAAGCGGTCATGATCCCGCG CCACTGCGTGATCGGCGACGACACGATCATCCGGCACGGCGTCACGATCGGGTACGCCTCGACGGACGCCCCGCCCGATG CCGTCCCGAAGATCGGCGCCCGAGTCGACATCGCGCCGGGCGCGCACCTGATCGGGCCGATCACGATCGGGGACGACGTG AAGATCGGACCTGGCTCGATCGTCACGACCGACGTCCCGGCGGGTGCCACCGTCTTCGCCGCCCCCGCGAGGATCATGCG CCCGCCCGCCGGGTGA
Upstream 100 bases:
>100_bases TACGCGGTGGAGAACGAGTTCGCGGTGCAGATCCCCGACGAGCGCCTCGGCTCGTTCGCGAACGTCGGTGAGCTGCGCGT GTGTATCGAGGAGCTCAGCG
Downstream 100 bases:
>100_bases AGGGTGCGGCCATCGCCGCGCCGTAGCGCTCGGCACCCGCGGAACGCACCGGGCACGGCTGCATCGGGGCGGTGTCCACC GGGCAGAAGTGCACGCCGTA
Product: hexapaptide repeat-containing transferase
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSAEPRTAEPAAAGSRGAPLSLRAQLREDRDVHYGARLHPGYQALAVHRFGRWCRERGGLVGRFGTIAFKAVNNIVIRNL QGTEISVDASIGRRVLIGHHQAVMIPRHCVIGDDTIIRHGVTIGYASTDAPPDAVPKIGARVDIAPGAHLIGPITIGDDV KIGPGSIVTTDVPAGATVFAAPARIMRPPAG
Sequences:
>Translated_191_residues MSAEPRTAEPAAAGSRGAPLSLRAQLREDRDVHYGARLHPGYQALAVHRFGRWCRERGGLVGRFGTIAFKAVNNIVIRNL QGTEISVDASIGRRVLIGHHQAVMIPRHCVIGDDTIIRHGVTIGYASTDAPPDAVPKIGARVDIAPGAHLIGPITIGDDV KIGPGSIVTTDVPAGATVFAAPARIMRPPAG >Mature_190_residues SAEPRTAEPAAAGSRGAPLSLRAQLREDRDVHYGARLHPGYQALAVHRFGRWCRERGGLVGRFGTIAFKAVNNIVIRNLQ GTEISVDASIGRRVLIGHHQAVMIPRHCVIGDDTIIRHGVTIGYASTDAPPDAVPKIGARVDIAPGAHLIGPITIGDDVK IGPGSIVTTDVPAGATVFAAPARIMRPPAG
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1788371, Length=150, Percent_Identity=35.3333333333333, Blast_Score=79, Evalue=1e-16, Organism=Escherichia coli, GI1790035, Length=153, Percent_Identity=31.3725490196078, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR005881 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 20090; Mature: 19959
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEPRTAEPAAAGSRGAPLSLRAQLREDRDVHYGARLHPGYQALAVHRFGRWCRERGGL CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCE VGRFGTIAFKAVNNIVIRNLQGTEISVDASIGRRVLIGHHQAVMIPRHCVIGDDTIIRHG EECHHHHHHHHHHHHEEECCCCCEEEEECCCCCEEEEECCEEEEECCEEEECCCEEEECC VTIGYASTDAPPDAVPKIGARVDIAPGAHLIGPITIGDDVKIGPGSIVTTDVPAGATVFA EEEEECCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCEECCCCEEEECCCCCCEEEE APARIMRPPAG CCHHHCCCCCC >Mature Secondary Structure SAEPRTAEPAAAGSRGAPLSLRAQLREDRDVHYGARLHPGYQALAVHRFGRWCRERGGL CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCE VGRFGTIAFKAVNNIVIRNLQGTEISVDASIGRRVLIGHHQAVMIPRHCVIGDDTIIRHG EECHHHHHHHHHHHHEEECCCCCEEEEECCCCCEEEEECCEEEEECCEEEECCCEEEECC VTIGYASTDAPPDAVPKIGARVDIAPGAHLIGPITIGDDVKIGPGSIVTTDVPAGATVFA EEEEECCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCEECCCCEEEECCCCCCEEEE APARIMRPPAG CCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]