| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318161
Identifier: 158318161
GI number: 158318161
Start: 7806646
End: 7807641
Strand: Direct
Name: 158318161
Synonym: Franean1_6426
Alternate gene names: NA
Gene position: 7806646-7807641 (Clockwise)
Preceding gene: 158318160
Following gene: 158318167
Centisome position: 86.91
GC content: 74.9
Gene sequence:
>996_bases ATGGACGAAGCGGCGGACCGGCGGCTGGTCGTTGCCACCTGTGCGACCACAGCCGCACTCGCGCTGGGCGGTTCGCGTCT CATGATCTCGCCGGAGGACCGGGGCCGCGACACACTCGACCGGATCGAGACGGGCCTGCGGACCATGGCCCGTCGCTGGG AGACGATGGCTCCCAGCGAGCTGGTCGAACGCCTCGATCTGATCGCCCGGCACACCGAGACGATGGCGGGTAGCCGCCAG TCGGCCGCGGTGCGCCGGGACTGGCGCCGAACGCACAGCAGAGTGCTCGTGATGTCGGCGGTGGCCCAGGGCGACAACGG CATGTCCGGGCGCGCGGTCGTGTCGGCCCGCACCGCGCTCGTTCTCGCCCGGCACGTCGGTGACGCGCCGACCGCGGCAC ACGCGGGCGTCGTGCTCGCCGAGCTCGCCGCCTACACGTTCGACAGTGTGGACGACGGTCTCGCGCTCGCGCTCGCGGCA CGGGCGACGGCACCCAGCTCCCACACCGCGGTACTCGCGATGACCACCGAGGCCAACATCCGCGCCGGGCGCGGCGAGCC GGCCGACCGGGTGAGGGCGGTGCTGCGGGAGGCCGAGGATCTCGCCCGCGAGCTGACCCCGGCGACCCAGGGCTACGCCC TCGACGGCCTGCACCCCGGCTACCTGCCGACGTTCGGCGGCGCCGCGCTGATCGGCGCGGGAGCCCTCGACGAGGGACGT CAGCGACTGGCGACGGCGGCCGCCCTGTTCGACCGCTCACGCGCGCCTGGAGCGCTCGCCGCGGTGCGGCTCTACCAGGC GTCCGCCGCGGTGCACGCCGACGCGCTGGACGAGGCGCAGACCCTGGCGACCCGGGCGCTGGCGACCTCCGCGGTACGTC CCACGGCCTGGCTGACGAACGGGATCATGTCGCTCGCCGACCGGGCGCGGCGCCGCGGCGCCGACTGGACAGGGCTGGTC AACCAGGCGCGGGAATGGGCACCGGCGGCGGTGTGA
Upstream 100 bases:
>100_bases GCTTCTAGATCGTCTCTTTCCGGAGAATAATCATGAGATTACGTCCGGACCATCCAGGCCTCCACCGCCGTAACCGGACA ACGACGCTCAGGAGTGCGGG
Downstream 100 bases:
>100_bases GACCGCCACGGGGCAGTGGCGGCGCGCGGTGTCCGCACGGCGCGCGCGTTCCCGCGCGACGCGGACGTCGGCGCGGATGT GACGGCGCGGACCAACCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MDEAADRRLVVATCATTAALALGGSRLMISPEDRGRDTLDRIETGLRTMARRWETMAPSELVERLDLIARHTETMAGSRQ SAAVRRDWRRTHSRVLVMSAVAQGDNGMSGRAVVSARTALVLARHVGDAPTAAHAGVVLAELAAYTFDSVDDGLALALAA RATAPSSHTAVLAMTTEANIRAGRGEPADRVRAVLREAEDLARELTPATQGYALDGLHPGYLPTFGGAALIGAGALDEGR QRLATAAALFDRSRAPGALAAVRLYQASAAVHADALDEAQTLATRALATSAVRPTAWLTNGIMSLADRARRRGADWTGLV NQAREWAPAAV
Sequences:
>Translated_331_residues MDEAADRRLVVATCATTAALALGGSRLMISPEDRGRDTLDRIETGLRTMARRWETMAPSELVERLDLIARHTETMAGSRQ SAAVRRDWRRTHSRVLVMSAVAQGDNGMSGRAVVSARTALVLARHVGDAPTAAHAGVVLAELAAYTFDSVDDGLALALAA RATAPSSHTAVLAMTTEANIRAGRGEPADRVRAVLREAEDLARELTPATQGYALDGLHPGYLPTFGGAALIGAGALDEGR QRLATAAALFDRSRAPGALAAVRLYQASAAVHADALDEAQTLATRALATSAVRPTAWLTNGIMSLADRARRRGADWTGLV NQAREWAPAAV >Mature_331_residues MDEAADRRLVVATCATTAALALGGSRLMISPEDRGRDTLDRIETGLRTMARRWETMAPSELVERLDLIARHTETMAGSRQ SAAVRRDWRRTHSRVLVMSAVAQGDNGMSGRAVVSARTALVLARHVGDAPTAAHAGVVLAELAAYTFDSVDDGLALALAA RATAPSSHTAVLAMTTEANIRAGRGEPADRVRAVLREAEDLARELTPATQGYALDGLHPGYLPTFGGAALIGAGALDEGR QRLATAAALFDRSRAPGALAAVRLYQASAAVHADALDEAQTLATRALATSAVRPTAWLTNGIMSLADRARRRGADWTGLV NQAREWAPAAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34884; Mature: 34884
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEAADRRLVVATCATTAALALGGSRLMISPEDRGRDTLDRIETGLRTMARRWETMAPSE CCCCCCCEEEEEHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH LVERLDLIARHTETMAGSRQSAAVRRDWRRTHSRVLVMSAVAQGDNGMSGRAVVSARTAL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH VLARHVGDAPTAAHAGVVLAELAAYTFDSVDDGLALALAARATAPSSHTAVLAMTTEANI HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCC RAGRGEPADRVRAVLREAEDLARELTPATQGYALDGLHPGYLPTFGGAALIGAGALDEGR CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCHHHHCCCCHHHHH QRLATAAALFDRSRAPGALAAVRLYQASAAVHADALDEAQTLATRALATSAVRPTAWLTN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH GIMSLADRARRRGADWTGLVNQAREWAPAAV HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MDEAADRRLVVATCATTAALALGGSRLMISPEDRGRDTLDRIETGLRTMARRWETMAPSE CCCCCCCEEEEEHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH LVERLDLIARHTETMAGSRQSAAVRRDWRRTHSRVLVMSAVAQGDNGMSGRAVVSARTAL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH VLARHVGDAPTAAHAGVVLAELAAYTFDSVDDGLALALAARATAPSSHTAVLAMTTEANI HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCC RAGRGEPADRVRAVLREAEDLARELTPATQGYALDGLHPGYLPTFGGAALIGAGALDEGR CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCHHHHCCCCHHHHH QRLATAAALFDRSRAPGALAAVRLYQASAAVHADALDEAQTLATRALATSAVRPTAWLTN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH GIMSLADRARRRGADWTGLVNQAREWAPAAV HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA