| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318122
Identifier: 158318122
GI number: 158318122
Start: 7753934
End: 7754452
Strand: Reverse
Name: 158318122
Synonym: Franean1_6386
Alternate gene names: NA
Gene position: 7754452-7753934 (Counterclockwise)
Preceding gene: 158318123
Following gene: 158318121
Centisome position: 86.33
GC content: 72.25
Gene sequence:
>519_bases GTGATCTTCCGGCGGCGTGACAGTGCCGGGAGTTCGGCGAACGACGATCCTGCCGCGGTGGCCGGCGGTGCCCGGGGGCC GGGCGACGACGTCGTCCGGCCGGTCCGCCAGCTCCAGCGTGAGCTCGCCGAGCTCGTCGCGGGCGCGAACGCGAACGGCG GGAGGCTGCCGCCCGGGGCGGTGCCGACCGTGCGCGACATCGACGACGTCCTGCGCCCGTTGCTGCGCTACATCGAGGTC CAGTCGGCGAGCGAGGAGGAGATGAGGTACCTCACCGCGATCGTGCACGAGTACCTGCCGCAGGCACTCGGGGATTTCGT CGCCCTGCCGGCCCACTACGCCGACCGCCCCGGGGTCACGGGGACCACGCCCGCCGACGACCTGATCCGTCAGCTGCAGC TCCTCGACGAGGGCGCCAACGAGCTGCAGGATCTCGTCTACACCGGGGACGCGGCGAAGCTGGCGATCCAGGCGCGCTTC CTGGACGCCAAGTTCCGGCGCTCCGACCTCGACTCGTGA
Upstream 100 bases:
>100_bases CCGGCGAGAGCTGACCGTGCCCACGGATGACCCGTCCTGACGCCCGCGCCGCGGCCGGCCCTGGGGCCGGCGCCGCGGCC GGTGGGGAGAGGAGGACGCC
Downstream 100 bases:
>100_bases CCGTCACCCTGCCCAGGGGCGGCAACGTGCTGCTGTCCCGGTCCGCGCCGGGCGTGGCGCGGGTGCGCGTCGCGTTCGGC TGGAGCGAGGCGCCCGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MIFRRRDSAGSSANDDPAAVAGGARGPGDDVVRPVRQLQRELAELVAGANANGGRLPPGAVPTVRDIDDVLRPLLRYIEV QSASEEEMRYLTAIVHEYLPQALGDFVALPAHYADRPGVTGTTPADDLIRQLQLLDEGANELQDLVYTGDAAKLAIQARF LDAKFRRSDLDS
Sequences:
>Translated_172_residues MIFRRRDSAGSSANDDPAAVAGGARGPGDDVVRPVRQLQRELAELVAGANANGGRLPPGAVPTVRDIDDVLRPLLRYIEV QSASEEEMRYLTAIVHEYLPQALGDFVALPAHYADRPGVTGTTPADDLIRQLQLLDEGANELQDLVYTGDAAKLAIQARF LDAKFRRSDLDS >Mature_172_residues MIFRRRDSAGSSANDDPAAVAGGARGPGDDVVRPVRQLQRELAELVAGANANGGRLPPGAVPTVRDIDDVLRPLLRYIEV QSASEEEMRYLTAIVHEYLPQALGDFVALPAHYADRPGVTGTTPADDLIRQLQLLDEGANELQDLVYTGDAAKLAIQARF LDAKFRRSDLDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18606; Mature: 18606
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFRRRDSAGSSANDDPAAVAGGARGPGDDVVRPVRQLQRELAELVAGANANGGRLPPGA CCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC VPTVRDIDDVLRPLLRYIEVQSASEEEMRYLTAIVHEYLPQALGDFVALPAHYADRPGVT CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC GTTPADDLIRQLQLLDEGANELQDLVYTGDAAKLAIQARFLDAKFRRSDLDS CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIFRRRDSAGSSANDDPAAVAGGARGPGDDVVRPVRQLQRELAELVAGANANGGRLPPGA CCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC VPTVRDIDDVLRPLLRYIEVQSASEEEMRYLTAIVHEYLPQALGDFVALPAHYADRPGVT CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC GTTPADDLIRQLQLLDEGANELQDLVYTGDAAKLAIQARFLDAKFRRSDLDS CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA