| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is terE [H]
Identifier: 158318121
GI number: 158318121
Start: 7752231
End: 7753937
Strand: Reverse
Name: terE [H]
Synonym: Franean1_6385
Alternate gene names: 158318121
Gene position: 7753937-7752231 (Counterclockwise)
Preceding gene: 158318122
Following gene: 158318118
Centisome position: 86.33
GC content: 75.28
Gene sequence:
>1707_bases GTGACCGTCACCCTGCCCAGGGGCGGCAACGTGCTGCTGTCCCGGTCCGCGCCGGGCGTGGCGCGGGTGCGCGTCGCGTT CGGCTGGAGCGAGGCGCCCGGCTCGGCCGTCGACGTGGACGGCGTCATCGCCCTCGTCGGCGGCGGCGGCGCGCCCACCC GGCTGCTCCTCGCCCACCAGGTGCCGAACCCCGCGGAACGGCTCGGCTCCCTGGCACCGCCCCGCCCGACCAGCGGCGAG GCCGAGGCCGTCGAGGACGTCGTCGTCACCCTGGCCGCGGTGCCCGCCGCCGTCAGCCGGCTGCAGTTCGGGGCTGCGAT CTACGACTCGGCCGGCCGCGGGCAGACGTTCCGGTCGGTGCCCCGCGGCCACATCCGGGTGCTCGACGACGCCGACGGCC GGGAGATCGTCAGCTACGCCTTCGATGTGGAGACCGGCCTTGAGACCGCCCTGATCTTCGGCGAGCTGTACCGGCACCCG ACGGGGTGGAAGTTCCGGGCGGTCGGCCAGGGGTACGCGGGCGGCCTGCCCGGCCTCGCCGGCGCGAACGGAGCTGGTGC GAACGGAGCTGGTGCGAACGGGGCCGGTGCGAACAGTGCCGGCGCGAATGCCGCCGTCGCGAACGGAGGCGGTGTGCCGG CGGCGCGGCCCGCCGACGTGGCCCCGTTCCTCACCCGGACCTCTCGGGCCCGGAGCCGCCGCAAGATCGCCGATCACCTG CACCCGGCGCATCTCGCCCACCCAACCGGCCCGTCCACACCGGCTCGGCCGGCACCGACCTCACAGTCGGGGCCGCAGCC ACCCGCGCCGGGAGCACGGCCTACTCCGGCGCCGACTTCACCGCCGCCATTCCCGCCTTCATCGCCACAGCGGCCGGCAC CACAGCGGCCGGCACCACAGCGGCCGGCACCACCACGGCCGGCACCACCACGGCCGGCCCCGCCGTCATCTCCACCGGCG GCCGGCGGCGCGCGGTCGCCGCTGGACCTCGGCGAGGACGACGAGGACACCGCGCGGCCGGAAACGCCGGCGGCCGGCGT CCCGGAGCGCCGCCCGTCGACCCCGGCCGAGGTCGGCGAGCGGTCCTCGCGCCACCGGCAGCGCAACGAACACGTCAGCG CGCTCGACGACGATCACCCGGCCACCATCTGGACGGCGGAGCAGCGCGGCTCCGGCGCCCTGACCGTGACCCTGCGCTGG GAGACCCTGACGACCCGCACGGGGCTGCCGCGCCCGAGCAACATCTACCTCGGCTGCCTCTGGCAGGCACTGGACGGCGC CGCCGGCGTCATCCAGCACCTGGGGCACTCCGCCAGCAGCGCCGGGCGCGCGGGCCGGCAGGTGCTGCGCCTGGGCAGCC GCGACGAGCGGGACGGCCAGACGATTTTCGTCGACCTGAGCGCCCTCGCCACGTTCAAGCGGTTCTTCGTCTTCGCCTAC GGGCTGCACAGCGCTCCGGAGTGGGCGTCGCTGCGGCCGGTGCTCACCGTCGCCGGGCGGTCGGGCGAACAGCTCGCCAT CCGCCCCGGCGGGGCTTCGCCAAGTGCCCGAACCTGCGTTGTCGCCTCTTTTCACATGGTAGGCGACGACCTGGTCATCC GGCGGGAGAACGATTTCGTCGAGGGGACCCAGGCCGACGCCGCGGCGCGGTACGGCTGGTCGCTGGAATGGAATCCAGAC GGCATGACACCGCGCGATACTCCGTAG
Upstream 100 bases:
>100_bases CCAACGAGCTGCAGGATCTCGTCTACACCGGGGACGCGGCGAAGCTGGCGATCCAGGCGCGCTTCCTGGACGCCAAGTTC CGGCGCTCCGACCTCGACTC
Downstream 100 bases:
>100_bases TGTTCCTTCATCGGCGCCGAAAATCCCGGCGCCGCCGAGCCGCGCCGCCGGTGCTGCCGCGCCGGGCCCTCCGCGCGAGG GCCGTCCGGCGTGCCGCCGG
Product: stress protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 568; Mature: 567
Protein sequence:
>568_residues MTVTLPRGGNVLLSRSAPGVARVRVAFGWSEAPGSAVDVDGVIALVGGGGAPTRLLLAHQVPNPAERLGSLAPPRPTSGE AEAVEDVVVTLAAVPAAVSRLQFGAAIYDSAGRGQTFRSVPRGHIRVLDDADGREIVSYAFDVETGLETALIFGELYRHP TGWKFRAVGQGYAGGLPGLAGANGAGANGAGANGAGANSAGANAAVANGGGVPAARPADVAPFLTRTSRARSRRKIADHL HPAHLAHPTGPSTPARPAPTSQSGPQPPAPGARPTPAPTSPPPFPPSSPQRPAPQRPAPQRPAPPRPAPPRPAPPSSPPA AGGARSPLDLGEDDEDTARPETPAAGVPERRPSTPAEVGERSSRHRQRNEHVSALDDDHPATIWTAEQRGSGALTVTLRW ETLTTRTGLPRPSNIYLGCLWQALDGAAGVIQHLGHSASSAGRAGRQVLRLGSRDERDGQTIFVDLSALATFKRFFVFAY GLHSAPEWASLRPVLTVAGRSGEQLAIRPGGASPSARTCVVASFHMVGDDLVIRRENDFVEGTQADAAARYGWSLEWNPD GMTPRDTP
Sequences:
>Translated_568_residues MTVTLPRGGNVLLSRSAPGVARVRVAFGWSEAPGSAVDVDGVIALVGGGGAPTRLLLAHQVPNPAERLGSLAPPRPTSGE AEAVEDVVVTLAAVPAAVSRLQFGAAIYDSAGRGQTFRSVPRGHIRVLDDADGREIVSYAFDVETGLETALIFGELYRHP TGWKFRAVGQGYAGGLPGLAGANGAGANGAGANGAGANSAGANAAVANGGGVPAARPADVAPFLTRTSRARSRRKIADHL HPAHLAHPTGPSTPARPAPTSQSGPQPPAPGARPTPAPTSPPPFPPSSPQRPAPQRPAPQRPAPPRPAPPRPAPPSSPPA AGGARSPLDLGEDDEDTARPETPAAGVPERRPSTPAEVGERSSRHRQRNEHVSALDDDHPATIWTAEQRGSGALTVTLRW ETLTTRTGLPRPSNIYLGCLWQALDGAAGVIQHLGHSASSAGRAGRQVLRLGSRDERDGQTIFVDLSALATFKRFFVFAY GLHSAPEWASLRPVLTVAGRSGEQLAIRPGGASPSARTCVVASFHMVGDDLVIRRENDFVEGTQADAAARYGWSLEWNPD GMTPRDTP >Mature_567_residues TVTLPRGGNVLLSRSAPGVARVRVAFGWSEAPGSAVDVDGVIALVGGGGAPTRLLLAHQVPNPAERLGSLAPPRPTSGEA EAVEDVVVTLAAVPAAVSRLQFGAAIYDSAGRGQTFRSVPRGHIRVLDDADGREIVSYAFDVETGLETALIFGELYRHPT GWKFRAVGQGYAGGLPGLAGANGAGANGAGANGAGANSAGANAAVANGGGVPAARPADVAPFLTRTSRARSRRKIADHLH PAHLAHPTGPSTPARPAPTSQSGPQPPAPGARPTPAPTSPPPFPPSSPQRPAPQRPAPQRPAPPRPAPPRPAPPSSPPAA GGARSPLDLGEDDEDTARPETPAAGVPERRPSTPAEVGERSSRHRQRNEHVSALDDDHPATIWTAEQRGSGALTVTLRWE TLTTRTGLPRPSNIYLGCLWQALDGAAGVIQHLGHSASSAGRAGRQVLRLGSRDERDGQTIFVDLSALATFKRFFVFAYG LHSAPEWASLRPVLTVAGRSGEQLAIRPGGASPSARTCVVASFHMVGDDLVIRRENDFVEGTQADAAARYGWSLEWNPDG MTPRDTP
Specific function: Not known; seems to contribute to the tellurium resistance (Ter) mechanism [H]
COG id: COG2310
COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CAPAB/TerDEXZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003325 [H]
Pfam domain/function: PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 58908; Mature: 58777
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTLPRGGNVLLSRSAPGVARVRVAFGWSEAPGSAVDVDGVIALVGGGGAPTRLLLAHQ CEEECCCCCCEEEECCCCCEEEEEEEECCCCCCCCEEECCCEEEEEECCCCCCEEEEEEC VPNPAERLGSLAPPRPTSGEAEAVEDVVVTLAAVPAAVSRLQFGAAIYDSAGRGQTFRSV CCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHC PRGHIRVLDDADGREIVSYAFDVETGLETALIFGELYRHPTGWKFRAVGQGYAGGLPGLA CCCEEEEEECCCCCEEEHEEEEHHHCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC GANGAGANGAGANGAGANSAGANAAVANGGGVPAARPADVAPFLTRTSRARSRRKIADHL CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC HPAHLAHPTGPSTPARPAPTSQSGPQPPAPGARPTPAPTSPPPFPPSSPQRPAPQRPAPQ CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPAPPRPAPPRPAPPSSPPAAGGARSPLDLGEDDEDTARPETPAAGVPERRPSTPAEVGE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RSSRHRQRNEHVSALDDDHPATIWTAEQRGSGALTVTLRWETLTTRTGLPRPSNIYLGCL HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEHH WQALDGAAGVIQHLGHSASSAGRAGRQVLRLGSRDERDGQTIFVDLSALATFKRFFVFAY HHHHCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH GLHSAPEWASLRPVLTVAGRSGEQLAIRPGGASPSARTCVVASFHMVGDDLVIRRENDFV HCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCEEEEEEEEECCCEEEEEECCCCC EGTQADAAARYGWSLEWNPDGMTPRDTP CCCCHHHHHHCCCEEEECCCCCCCCCCC >Mature Secondary Structure TVTLPRGGNVLLSRSAPGVARVRVAFGWSEAPGSAVDVDGVIALVGGGGAPTRLLLAHQ EEECCCCCCEEEECCCCCEEEEEEEECCCCCCCCEEECCCEEEEEECCCCCCEEEEEEC VPNPAERLGSLAPPRPTSGEAEAVEDVVVTLAAVPAAVSRLQFGAAIYDSAGRGQTFRSV CCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHC PRGHIRVLDDADGREIVSYAFDVETGLETALIFGELYRHPTGWKFRAVGQGYAGGLPGLA CCCEEEEEECCCCCEEEHEEEEHHHCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC GANGAGANGAGANGAGANSAGANAAVANGGGVPAARPADVAPFLTRTSRARSRRKIADHL CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC HPAHLAHPTGPSTPARPAPTSQSGPQPPAPGARPTPAPTSPPPFPPSSPQRPAPQRPAPQ CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPAPPRPAPPRPAPPSSPPAAGGARSPLDLGEDDEDTARPETPAAGVPERRPSTPAEVGE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RSSRHRQRNEHVSALDDDHPATIWTAEQRGSGALTVTLRWETLTTRTGLPRPSNIYLGCL HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEHH WQALDGAAGVIQHLGHSASSAGRAGRQVLRLGSRDERDGQTIFVDLSALATFKRFFVFAY HHHHCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH GLHSAPEWASLRPVLTVAGRSGEQLAIRPGGASPSARTCVVASFHMVGDDLVIRRENDFV HCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCEEEEEEEEECCCEEEEEECCCCC EGTQADAAARYGWSLEWNPDGMTPRDTP CCCCHHHHHHCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3049247 [H]