Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318120

Identifier: 158318120

GI number: 158318120

Start: 7751655

End: 7752125

Strand: Direct

Name: 158318120

Synonym: Franean1_6384

Alternate gene names: NA

Gene position: 7751655-7752125 (Clockwise)

Preceding gene: 158318119

Following gene: 158318125

Centisome position: 86.3

GC content: 71.55

Gene sequence:

>471_bases
ATGGGCGCGACGCACGACCCCGCGAGGACACAGCTGGCGAACTACCCGTTCGTCATGACGCTGCAACCCCGCTTCGGCGA
CATGGACAGCCTCGGGCACGTGAACAACGTGGCCATCGCGGCGCTCTTCGAGGAGGCCCGGGTCGGGATGAACCGGGCGA
TGCTCGGCGACAGCCATGTGGCGCCGGCGCTGAGCCGCCCGCTACCGGTGGTCGCGGCCCGCGTGGAGATCGACTATCTG
GGCGAGGTCCGCTACCCCGGGGAGTACCACGTCGGCGTGGGCGTCGGCAGGGTCGGCACCAGCTCCGTCCTGCAGGTGTG
CGCGATGTTCGACGGCGAGACCTGTGTCGCGCTGTGCGACGCCGTGCTGGTGCACCGCCCGGCCACCGGGCCGGCGCCGG
TACCGCAGGAGGTGCGCGAGCTCCTGACGACGGTCATGGCCTTTCCCACCCGGGTCGACGCCGGGGTCTGA

Upstream 100 bases:

>100_bases
CACCGCGAGGGCGCCGGGCGCGGCCACGGGCGCCGGCGCCGGAGGAGACACATGCCACGCCGGCTCCCCCGGGCCGCGCC
CGGAGCGGTAGAAGGACTTC

Downstream 100 bases:

>100_bases
CCTGCCCGGCGGCACGCCGGACGGCCCTCGCGCGGAGGGCCCGGCGCGGCAGCACCGGCGGCGCGGCTCGGCGGCGCCGG
GATTTTCGGCGCCGATGAAG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MGATHDPARTQLANYPFVMTLQPRFGDMDSLGHVNNVAIAALFEEARVGMNRAMLGDSHVAPALSRPLPVVAARVEIDYL
GEVRYPGEYHVGVGVGRVGTSSVLQVCAMFDGETCVALCDAVLVHRPATGPAPVPQEVRELLTTVMAFPTRVDAGV

Sequences:

>Translated_156_residues
MGATHDPARTQLANYPFVMTLQPRFGDMDSLGHVNNVAIAALFEEARVGMNRAMLGDSHVAPALSRPLPVVAARVEIDYL
GEVRYPGEYHVGVGVGRVGTSSVLQVCAMFDGETCVALCDAVLVHRPATGPAPVPQEVRELLTTVMAFPTRVDAGV
>Mature_155_residues
GATHDPARTQLANYPFVMTLQPRFGDMDSLGHVNNVAIAALFEEARVGMNRAMLGDSHVAPALSRPLPVVAARVEIDYLG
EVRYPGEYHVGVGVGRVGTSSVLQVCAMFDGETCVALCDAVLVHRPATGPAPVPQEVRELLTTVMAFPTRVDAGV

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16598; Mature: 16467

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGATHDPARTQLANYPFVMTLQPRFGDMDSLGHVNNVAIAALFEEARVGMNRAMLGDSHV
CCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCC
APALSRPLPVVAARVEIDYLGEVRYPGEYHVGVGVGRVGTSSVLQVCAMFDGETCVALCD
CHHHCCCCCEEEEEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHH
AVLVHRPATGPAPVPQEVRELLTTVMAFPTRVDAGV
HHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GATHDPARTQLANYPFVMTLQPRFGDMDSLGHVNNVAIAALFEEARVGMNRAMLGDSHV
CCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCC
APALSRPLPVVAARVEIDYLGEVRYPGEYHVGVGVGRVGTSSVLQVCAMFDGETCVALCD
CHHHCCCCCEEEEEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHH
AVLVHRPATGPAPVPQEVRELLTTVMAFPTRVDAGV
HHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA