| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318115
Identifier: 158318115
GI number: 158318115
Start: 7741057
End: 7742208
Strand: Reverse
Name: 158318115
Synonym: Franean1_6379
Alternate gene names: NA
Gene position: 7742208-7741057 (Counterclockwise)
Preceding gene: 158318116
Following gene: 158318112
Centisome position: 86.2
GC content: 68.32
Gene sequence:
>1152_bases ATGACCCAGCCGAACCCGTACTACCTTCCCGAAGAGCGTGCCCGGGAGATCTTCACCAACGAGATTGTCAGGGAGAAGTT CGCGGGTGTGGTCTCCCACCGCGACGACGGGCGACGACCGGTCGCGGTGATCGTCATGGGCCAGCCTGGCGCCGGGAAGA CCCGAATCGCCGACGCCGTCAAGCAACAGCTCGACGAACGGGGCGGGGCCGCCCACGTCGTGGGCGACTTCTACAAGCCC TACCACCCCGACTACGACGAGCTGGTCATCACCGACCCGGAGCGCGCCTCACCGCTGACCTCCCCGGACGCCCGCCGGTG GATCGACATGGCCACCGAGTACGTGATCGACCAGCGTGCGGACGTACTGCTGGAAAGCGCCGGTCGCGACCGGGCCGACT TCGCCGACATCGCCGAACGCCTCCACAACAACGGCTACCGGGTGGAGGCGGCCGTGGTGGCCGTCGATGAGGCGCACAGC AGGCTCGGTATCGTCGACCGCTACCACGAACAGGTTGCGGACACCGGATACGGCCGGCTCACCGCGCGGGAAACCCACGA CCTCTCCTATGCCGGCGTGCTGGATTCGGCCGACTTCATCGACCGATCAGACGCGGTCGACGCGGTCGCCGTGGTCCGCC GCAACAACGAGATCCTGTACGCCAACGAACGCGATGCCAGCGGCGGGTGGCAGCAGGCGCCCGCCACCCGGGAGGCGATT GAGGCCGAGCGCGGCCGTAGCTGGAGCCCCGAGGAGACCGAACAGTTCGCTAACAAGATCGACAATCTGGCGAATGCGAT GGGCCCCCAGTGGCACACCGAGTTCGACGACATCACTGACCGGGCGCGGGCACGGGCCGATCCGGCGGTGGCCCTGCCCA AGCGGAGTCCCACCGTCGAAACGAGCACCAAAGCCGGCTCCCGTAGTCCGATCCCTGCCTCTGGTACGGACACCGCCGCG ACTCCCGATGCCGCCTCCCCCGCAGACCCCCAGATCACACCGGCGGCGCCCTCACATACCACCCAGTCCCCGGCACAAGC GTCGTTCTCTGGGTCTGTCAAGCCATCCCCGCCTCGCAGGGGCAGTGGCCCACCACCTGGAACCCCGCCACCCGGTCCGC AGATCGGCCAGGGACCTGCCAAAGGCCGATAG
Upstream 100 bases:
>100_bases CAGACCAGCAGGGGCTGCGGGCGTCCGACCCGGCGGTCGTACAGGAGACCCGCGAACGCTACACCGCCCTGCTCCGGTCG CTGCGGGGCCAGGCCGGCTG
Downstream 100 bases:
>100_bases CGGCGGATCTCGGCCGTGCCTGCTCAGCGGAACCCGTAGGCGTCGCGGATCTCCCAGGCGGGCTATCGCTTCACGGGGTG CCGGTAAGCAACGTGTCACC
Product: zeta toxin family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MTQPNPYYLPEERAREIFTNEIVREKFAGVVSHRDDGRRPVAVIVMGQPGAGKTRIADAVKQQLDERGGAAHVVGDFYKP YHPDYDELVITDPERASPLTSPDARRWIDMATEYVIDQRADVLLESAGRDRADFADIAERLHNNGYRVEAAVVAVDEAHS RLGIVDRYHEQVADTGYGRLTARETHDLSYAGVLDSADFIDRSDAVDAVAVVRRNNEILYANERDASGGWQQAPATREAI EAERGRSWSPEETEQFANKIDNLANAMGPQWHTEFDDITDRARARADPAVALPKRSPTVETSTKAGSRSPIPASGTDTAA TPDAASPADPQITPAAPSHTTQSPAQASFSGSVKPSPPRRGSGPPPGTPPPGPQIGQGPAKGR
Sequences:
>Translated_383_residues MTQPNPYYLPEERAREIFTNEIVREKFAGVVSHRDDGRRPVAVIVMGQPGAGKTRIADAVKQQLDERGGAAHVVGDFYKP YHPDYDELVITDPERASPLTSPDARRWIDMATEYVIDQRADVLLESAGRDRADFADIAERLHNNGYRVEAAVVAVDEAHS RLGIVDRYHEQVADTGYGRLTARETHDLSYAGVLDSADFIDRSDAVDAVAVVRRNNEILYANERDASGGWQQAPATREAI EAERGRSWSPEETEQFANKIDNLANAMGPQWHTEFDDITDRARARADPAVALPKRSPTVETSTKAGSRSPIPASGTDTAA TPDAASPADPQITPAAPSHTTQSPAQASFSGSVKPSPPRRGSGPPPGTPPPGPQIGQGPAKGR >Mature_382_residues TQPNPYYLPEERAREIFTNEIVREKFAGVVSHRDDGRRPVAVIVMGQPGAGKTRIADAVKQQLDERGGAAHVVGDFYKPY HPDYDELVITDPERASPLTSPDARRWIDMATEYVIDQRADVLLESAGRDRADFADIAERLHNNGYRVEAAVVAVDEAHSR LGIVDRYHEQVADTGYGRLTARETHDLSYAGVLDSADFIDRSDAVDAVAVVRRNNEILYANERDASGGWQQAPATREAIE AERGRSWSPEETEQFANKIDNLANAMGPQWHTEFDDITDRARARADPAVALPKRSPTVETSTKAGSRSPIPASGTDTAAT PDAASPADPQITPAAPSHTTQSPAQASFSGSVKPSPPRRGSGPPPGTPPPGPQIGQGPAKGR
Specific function: Part of a postsegregational killing (PSK) system involved in the killing of plasmid-free cells. The zeta-toxin induces programmed cell death [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zeta-toxin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010488 [H]
Pfam domain/function: PF06414 Zeta_toxin [H]
EC number: NA
Molecular weight: Translated: 41468; Mature: 41337
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPNPYYLPEERAREIFTNEIVREKFAGVVSHRDDGRRPVAVIVMGQPGAGKTRIADAV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHH KQQLDERGGAAHVVGDFYKPYHPDYDELVITDPERASPLTSPDARRWIDMATEYVIDQRA HHHHHHCCCEEEEHHHHHCCCCCCCCCEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHH DVLLESAGRDRADFADIAERLHNNGYRVEAAVVAVDEAHSRLGIVDRYHEQVADTGYGRL HHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCE TARETHDLSYAGVLDSADFIDRSDAVDAVAVVRRNNEILYANERDASGGWQQAPATREAI EECCCCCCHHHHCCCCHHHHCCHHHHHHHHHEECCCCEEEECCCCCCCCCCCCCHHHHHH EAERGRSWSPEETEQFANKIDNLANAMGPQWHTEFDDITDRARARADPAVALPKRSPTVE HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCC TSTKAGSRSPIPASGTDTAATPDAASPADPQITPAAPSHTTQSPAQASFSGSVKPSPPRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC GSGPPPGTPPPGPQIGQGPAKGR CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQPNPYYLPEERAREIFTNEIVREKFAGVVSHRDDGRRPVAVIVMGQPGAGKTRIADAV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHH KQQLDERGGAAHVVGDFYKPYHPDYDELVITDPERASPLTSPDARRWIDMATEYVIDQRA HHHHHHCCCEEEEHHHHHCCCCCCCCCEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHH DVLLESAGRDRADFADIAERLHNNGYRVEAAVVAVDEAHSRLGIVDRYHEQVADTGYGRL HHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCE TARETHDLSYAGVLDSADFIDRSDAVDAVAVVRRNNEILYANERDASGGWQQAPATREAI EECCCCCCHHHHCCCCHHHHCCHHHHHHHHHEECCCCEEEECCCCCCCCCCCCCHHHHHH EAERGRSWSPEETEQFANKIDNLANAMGPQWHTEFDDITDRARARADPAVALPKRSPTVE HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCC TSTKAGSRSPIPASGTDTAATPDAASPADPQITPAAPSHTTQSPAQASFSGSVKPSPPRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC GSGPPPGTPPPGPQIGQGPAKGR CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11735367 [H]