| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318114
Identifier: 158318114
GI number: 158318114
Start: 7739507
End: 7739995
Strand: Direct
Name: 158318114
Synonym: Franean1_6378
Alternate gene names: NA
Gene position: 7739507-7739995 (Clockwise)
Preceding gene: 158318113
Following gene: 158318119
Centisome position: 86.17
GC content: 64.21
Gene sequence:
>489_bases ATGTTCATATGGCCCCGAATGACCACTGGACCCGAACGTCTCATGTTGGAGAGCATGCTTGACCGCAACCGGCAAGCGCT CATCGACACAGCGCGAGGGCTATCCGAGACTGACGCGCGGCGGCGCCTGGTCGTCTCACTGACCACACCGATCGGGCTGA TCAAACACGCCGCCACCGCCGAGCGCGTCTGGTTCCAACGCACCCTGCTCGGCCTGGACGAGTCCGCATGCGACGGCTAC GCGACCGGTGACGACGGCAGTTTCGTTGTCGCCGACGGCGAAACGCTGGCCGACGTGATCGCCGAGTTTGAGCGTGCCAG CGAGCGTTCCCGCGTGATCGCCGCCGACTTCGAGCTCGACGACACCAAGGCGCACCCCCGCGCTGGCGATATCAGCCTGC GGTTTGTCTACCTGCTCCTGATCGAGGATTTCGCCCGTCACGCCGGCCATGGTGACATTCTCCGAGAACAAATCACCGCC GCACGATAG
Upstream 100 bases:
>100_bases ATCGAGACGAGCCCTGTCCGATCGAGCCTCATGCTGCTCGAGTACGCGCCCATGGTCTGGATCCGTCAATGTCCTTTCAA CCCAGAAAGCTAAACTATTT
Downstream 100 bases:
>100_bases GCGTTGGCAGGGTTGCGCAAGATCTGGTTGCAACCCAAGCGTCGGTCCCGGGTCGTGGTCGTTCGTCGGGCGGGCGCCAG AGTTCACTGTCGACTCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MFIWPRMTTGPERLMLESMLDRNRQALIDTARGLSETDARRRLVVSLTTPIGLIKHAATAERVWFQRTLLGLDESACDGY ATGDDGSFVVADGETLADVIAEFERASERSRVIAADFELDDTKAHPRAGDISLRFVYLLLIEDFARHAGHGDILREQITA AR
Sequences:
>Translated_162_residues MFIWPRMTTGPERLMLESMLDRNRQALIDTARGLSETDARRRLVVSLTTPIGLIKHAATAERVWFQRTLLGLDESACDGY ATGDDGSFVVADGETLADVIAEFERASERSRVIAADFELDDTKAHPRAGDISLRFVYLLLIEDFARHAGHGDILREQITA AR >Mature_162_residues MFIWPRMTTGPERLMLESMLDRNRQALIDTARGLSETDARRRLVVSLTTPIGLIKHAATAERVWFQRTLLGLDESACDGY ATGDDGSFVVADGETLADVIAEFERASERSRVIAADFELDDTKAHPRAGDISLRFVYLLLIEDFARHAGHGDILREQITA AR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007061 [H]
Pfam domain/function: PF04978 DUF664 [H]
EC number: NA
Molecular weight: Translated: 18075; Mature: 18075
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIWPRMTTGPERLMLESMLDRNRQALIDTARGLSETDARRRLVVSLTTPIGLIKHAATA CEECCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCEEEEEECCHHHHHHHHHHH ERVWFQRTLLGLDESACDGYATGDDGSFVVADGETLADVIAEFERASERSRVIAADFELD HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCEEEEECCCCC DTKAHPRAGDISLRFVYLLLIEDFARHAGHGDILREQITAAR CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure MFIWPRMTTGPERLMLESMLDRNRQALIDTARGLSETDARRRLVVSLTTPIGLIKHAATA CEECCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCEEEEEECCHHHHHHHHHHH ERVWFQRTLLGLDESACDGYATGDDGSFVVADGETLADVIAEFERASERSRVIAADFELD HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCEEEEECCCCC DTKAHPRAGDISLRFVYLLLIEDFARHAGHGDILREQITAAR CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2575701; 12000953 [H]