| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318111
Identifier: 158318111
GI number: 158318111
Start: 7735916
End: 7736227
Strand: Reverse
Name: 158318111
Synonym: Franean1_6375
Alternate gene names: NA
Gene position: 7736227-7735916 (Counterclockwise)
Preceding gene: 158318112
Following gene: 158318110
Centisome position: 86.13
GC content: 72.12
Gene sequence:
>312_bases TTGCCCCTTTCCGGCGTATCTCGGCGGCCCCCCGAGTTCATCCGCGAACTCATCGTCGCCGGCACCCACGAGGGCCTGGC CGCCGCACGCGAACGCGGCCGCGTCGGCGGACGGCCCACCGTCGCCACCCCAGAGATCATCCGCGCCGCCCGCGACATGC TCCCCAACCCGGACGCCAGCATCACCTCGATCGCGAAGCTGCTCGGCGTCAGCCCCGGCACGCTCTACAACCACATCCCC GACCTGCGCGAGCTACGCGCTGCCGGCCAAGCCAGACATGAGCTCGCCGCCGCCGAGCCACAGGCCAGCTAG
Upstream 100 bases:
>100_bases CGCTGCACCGCTACCTCGCAGGCAGCGAACCGGCGCCAGCGTCGACACAGTAACCGCCCAACGGACCAGACAGCCGCTAC ACGACGTCGCCCGACGACCA
Downstream 100 bases:
>100_bases ATCATCGCCGTTTGCGGCTGGTGACACGTTCCTTACCGGCACAAAGTCCGCAAGTTCAGCCTGACTGAAGGTTCTTCGCA TCGAACCCACGGCTTTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Resolvase-Like Protein; Resolvase
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MPLSGVSRRPPEFIRELIVAGTHEGLAAARERGRVGGRPTVATPEIIRAARDMLPNPDASITSIAKLLGVSPGTLYNHIP DLRELRAAGQARHELAAAEPQAS
Sequences:
>Translated_103_residues MPLSGVSRRPPEFIRELIVAGTHEGLAAARERGRVGGRPTVATPEIIRAARDMLPNPDASITSIAKLLGVSPGTLYNHIP DLRELRAAGQARHELAAAEPQAS >Mature_102_residues PLSGVSRRPPEFIRELIVAGTHEGLAAARERGRVGGRPTVATPEIIRAARDMLPNPDASITSIAKLLGVSPGTLYNHIPD LRELRAAGQARHELAAAEPQAS
Specific function: Unknown
COG id: COG1961
COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10937; Mature: 10805
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSGVSRRPPEFIRELIVAGTHEGLAAARERGRVGGRPTVATPEIIRAARDMLPNPDAS CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCH ITSIAKLLGVSPGTLYNHIPDLRELRAAGQARHELAAAEPQAS HHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PLSGVSRRPPEFIRELIVAGTHEGLAAARERGRVGGRPTVATPEIIRAARDMLPNPDAS CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCH ITSIAKLLGVSPGTLYNHIPDLRELRAAGQARHELAAAEPQAS HHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA