| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318109
Identifier: 158318109
GI number: 158318109
Start: 7733473
End: 7734741
Strand: Direct
Name: 158318109
Synonym: Franean1_6373
Alternate gene names: NA
Gene position: 7733473-7734741 (Clockwise)
Preceding gene: 158318108
Following gene: 158318113
Centisome position: 86.1
GC content: 72.97
Gene sequence:
>1269_bases GTGACCTGCCGGCGCTGCGGCCGTCCGCTGCCCGTCGGTGGCCGGCGCGACCGGCTCTACTGCAACGCCAGCTGCCGGAA CATGGCCTACGCCGCCCGCCGAGGGACCGGCGTCCCGCCACCCGACCGCTGGCAGCATCCCGCCCTGAAATCGGACACCC CCGTGCTGCGGGCAGCCGCGACGCGGGCCCAGGAACTGGGCCAGGCCCACGGCTGGTCGCCCTCGACTACCCGGTGCGCG ATGGATGGCCTGGCCGTCGTCCTGGACGGCCAGGCCGCGGGCCGCCGTCCCCGGCTTACCGAAGTCCGCGCCGTCCTTCC GCGGCAGGCCTCCAGCGCGCGGGTCGCCGAAGTCCTCACCGACCTCGGGCTGCTCGAAGACGACACCACGCCGCCGATCC GCGCCTGGGTCGAGCACCGGACCGGCGACCTGCCCGCCGGTTTCGCCGTGATCGTGCGGGCCTGGCTGCTGGTGCTGCTC GACGGCGACGCCCGAGCCCGGCCGCGGTCGCACGCCAGCATCTACGTCTACTTCGGCGGTGTCCGCCCGCACCTGGAACA TTGGGCGGCGACCCGCAGCCACCTGCGTGAGATCACCGCGGCCGACGTGAAGGCCGCGCTGGATCCTCTGCGCGGCGAGC GGCGCAGCAACGCGGCCGTCGCGTTGCGATCGCTGTTCCGGTTCGCCAAGAAACGCGGCCTGACCTTCGCTGACCCCACC GCCCGCCTTGCAGTCCCCCGCCCCGACCGACGCGGCCTGCTCCCGCTGACGGAAGCCGACATCCACGCTGTCGAGCAGGC TGCCGTCGCTCTGGCGCAGCGGCTGATCGTCGCGCTGGCCGCCGTCCACGCCGCACGCGCCGCGACGATCCGCCACCTGG CCCTCGATGACCTCGACCTGCCCAACCGGCGCATCACCCTCGCCGGCCACACCCAGCACCTCGGCGAGATGACCCGCCAG CTGCTGCAGACCTGGCTCGAGCACCGCCGCGCCCGCTGGCCGCACACCCCCAACCGGCATGTCCTGATCAGTGAGAGAAC TGCCCTGGGCAGCGGCCCCATCAGCCCCAGCTACCTTCACCAGCACCTGCTCCGTCGCGGCATTCATCTCGACCGCATCC GCGCCGACCGTGTGCTCCACGAGGCCCTGACCGTCGGCCCCGACCCCCTGCACCTGGCCCTCGTCTTCAACCTGTCGCAC TCCACAGCCAGCAGATACGCCGCCATCGCCCAGAACCTCCTCGACGACCAGGGGGGTCGAGGACCGTAA
Upstream 100 bases:
>100_bases CGGCGGTGCCGGCCGCCGACGGCGAGCAGGTGGCCGCCGCGGCGGCTCAGACTCGGGCGGTCACGCCCCGGCCCCGCCCT GGCCGGTCGTTGCCGCCTCG
Downstream 100 bases:
>100_bases CAGGAATTAGCATGAGGCGTCACTCTGCGCCTCAGTGGCCGGGGTCAGCAGTGCGGCGGCGCGGTCGGCGCCGGTGGGCT TCGAGAAACGGCCCGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MTCRRCGRPLPVGGRRDRLYCNASCRNMAYAARRGTGVPPPDRWQHPALKSDTPVLRAAATRAQELGQAHGWSPSTTRCA MDGLAVVLDGQAAGRRPRLTEVRAVLPRQASSARVAEVLTDLGLLEDDTTPPIRAWVEHRTGDLPAGFAVIVRAWLLVLL DGDARARPRSHASIYVYFGGVRPHLEHWAATRSHLREITAADVKAALDPLRGERRSNAAVALRSLFRFAKKRGLTFADPT ARLAVPRPDRRGLLPLTEADIHAVEQAAVALAQRLIVALAAVHAARAATIRHLALDDLDLPNRRITLAGHTQHLGEMTRQ LLQTWLEHRRARWPHTPNRHVLISERTALGSGPISPSYLHQHLLRRGIHLDRIRADRVLHEALTVGPDPLHLALVFNLSH STASRYAAIAQNLLDDQGGRGP
Sequences:
>Translated_422_residues MTCRRCGRPLPVGGRRDRLYCNASCRNMAYAARRGTGVPPPDRWQHPALKSDTPVLRAAATRAQELGQAHGWSPSTTRCA MDGLAVVLDGQAAGRRPRLTEVRAVLPRQASSARVAEVLTDLGLLEDDTTPPIRAWVEHRTGDLPAGFAVIVRAWLLVLL DGDARARPRSHASIYVYFGGVRPHLEHWAATRSHLREITAADVKAALDPLRGERRSNAAVALRSLFRFAKKRGLTFADPT ARLAVPRPDRRGLLPLTEADIHAVEQAAVALAQRLIVALAAVHAARAATIRHLALDDLDLPNRRITLAGHTQHLGEMTRQ LLQTWLEHRRARWPHTPNRHVLISERTALGSGPISPSYLHQHLLRRGIHLDRIRADRVLHEALTVGPDPLHLALVFNLSH STASRYAAIAQNLLDDQGGRGP >Mature_421_residues TCRRCGRPLPVGGRRDRLYCNASCRNMAYAARRGTGVPPPDRWQHPALKSDTPVLRAAATRAQELGQAHGWSPSTTRCAM DGLAVVLDGQAAGRRPRLTEVRAVLPRQASSARVAEVLTDLGLLEDDTTPPIRAWVEHRTGDLPAGFAVIVRAWLLVLLD GDARARPRSHASIYVYFGGVRPHLEHWAATRSHLREITAADVKAALDPLRGERRSNAAVALRSLFRFAKKRGLTFADPTA RLAVPRPDRRGLLPLTEADIHAVEQAAVALAQRLIVALAAVHAARAATIRHLALDDLDLPNRRITLAGHTQHLGEMTRQL LQTWLEHRRARWPHTPNRHVLISERTALGSGPISPSYLHQHLLRRGIHLDRIRADRVLHEALTVGPDPLHLALVFNLSHS TASRYAAIAQNLLDDQGGRGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46489; Mature: 46358
Theoretical pI: Translated: 11.63; Mature: 11.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCRRCGRPLPVGGRRDRLYCNASCRNMAYAARRGTGVPPPDRWQHPALKSDTPVLRAAA CCHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH TRAQELGQAHGWSPSTTRCAMDGLAVVLDGQAAGRRPRLTEVRAVLPRQASSARVAEVLT HHHHHHHHHCCCCCCCHHHHHCCEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH DLGLLEDDTTPPIRAWVEHRTGDLPAGFAVIVRAWLLVLLDGDARARPRSHASIYVYFGG HHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC VRPHLEHWAATRSHLREITAADVKAALDPLRGERRSNAAVALRSLFRFAKKRGLTFADPT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEECCCC ARLAVPRPDRRGLLPLTEADIHAVEQAAVALAQRLIVALAAVHAARAATIRHLALDDLDL CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PNRRITLAGHTQHLGEMTRQLLQTWLEHRRARWPHTPNRHVLISERTALGSGPISPSYLH CCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHH QHLLRRGIHLDRIRADRVLHEALTVGPDPLHLALVFNLSHSTASRYAAIAQNLLDDQGGR HHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCC GP CC >Mature Secondary Structure TCRRCGRPLPVGGRRDRLYCNASCRNMAYAARRGTGVPPPDRWQHPALKSDTPVLRAAA CHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH TRAQELGQAHGWSPSTTRCAMDGLAVVLDGQAAGRRPRLTEVRAVLPRQASSARVAEVLT HHHHHHHHHCCCCCCCHHHHHCCEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH DLGLLEDDTTPPIRAWVEHRTGDLPAGFAVIVRAWLLVLLDGDARARPRSHASIYVYFGG HHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC VRPHLEHWAATRSHLREITAADVKAALDPLRGERRSNAAVALRSLFRFAKKRGLTFADPT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEECCCC ARLAVPRPDRRGLLPLTEADIHAVEQAAVALAQRLIVALAAVHAARAATIRHLALDDLDL CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PNRRITLAGHTQHLGEMTRQLLQTWLEHRRARWPHTPNRHVLISERTALGSGPISPSYLH CCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHH QHLLRRGIHLDRIRADRVLHEALTVGPDPLHLALVFNLSHSTASRYAAIAQNLLDDQGGR HHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCC GP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA