| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is ytoA [H]
Identifier: 158318096
GI number: 158318096
Start: 7721818
End: 7722342
Strand: Reverse
Name: ytoA [H]
Synonym: Franean1_6360
Alternate gene names: 158318096
Gene position: 7722342-7721818 (Counterclockwise)
Preceding gene: 158318098
Following gene: 158318095
Centisome position: 85.98
GC content: 64.57
Gene sequence:
>525_bases GTGATCATCATACCGTTCAACGGAAAGAGCCCGAAGGTGGCGGCGTCCGCGCTCGTTGCCGACAACGTCACCCTCATCGG CGACGTCGAGATCGGCGAGGAGTGCTCGATCTGGCCCGGTGTGGTCATCCGGTCGGACACCACCCCGATCAGGATCGGCA ACAACGTCCACATCGAGGAGAACTCGGTGCTGCACACCAGCACGCACATCGAGGACAACGTGATGATCGGGCACAACTGC ACGATCGAGGCCTTCGTCGGCCACGACTGCATGATCGGGAACACGGCGGCGCTGATGCCGCTGTCGCGGGTAGGTGCCCA CTGTGCCATCGCCGCCGGGTCCGTCGTGCTGGAGCAGGTGGAGATCCCCGAGTACTGCTTCGCGGTGGGTGCTCCCGCGA AGGTCCACTCGAAGATCGACCCGGGCAACCCCAAGCACGCGATGCGGCTCGCTTCCACCTACCTGCCCACGATGCGCAAG ATAGCCGACGAGTACCGCCGTCAGGGCATCTGGAGCCGGGCATGA
Upstream 100 bases:
>100_bases CAAGAGAGCGCGGGAAGGTGTCGCTTTCCGTGGCGCTCCCGGGTACTTGCGTCGCCCCGATCCGGGGATTTCGAACTTCG GCCTCGACAGAGGAGCTCCA
Downstream 100 bases:
>100_bases GCAAGCCGGACGGGCCGCTGACAGGCATACGCGTCATCGACTGGACGATCTGGCAGCACGGCCCGGTGGCCGGCGCCATG CTCGGCGATCTCGGCGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MIIIPFNGKSPKVAASALVADNVTLIGDVEIGEECSIWPGVVIRSDTTPIRIGNNVHIEENSVLHTSTHIEDNVMIGHNC TIEAFVGHDCMIGNTAALMPLSRVGAHCAIAAGSVVLEQVEIPEYCFAVGAPAKVHSKIDPGNPKHAMRLASTYLPTMRK IADEYRRQGIWSRA
Sequences:
>Translated_174_residues MIIIPFNGKSPKVAASALVADNVTLIGDVEIGEECSIWPGVVIRSDTTPIRIGNNVHIEENSVLHTSTHIEDNVMIGHNC TIEAFVGHDCMIGNTAALMPLSRVGAHCAIAAGSVVLEQVEIPEYCFAVGAPAKVHSKIDPGNPKHAMRLASTYLPTMRK IADEYRRQGIWSRA >Mature_174_residues MIIIPFNGKSPKVAASALVADNVTLIGDVEIGEECSIWPGVVIRSDTTPIRIGNNVHIEENSVLHTSTHIEDNVMIGHNC TIEAFVGHDCMIGNTAALMPLSRVGAHCAIAAGSVVLEQVEIPEYCFAVGAPAKVHSKIDPGNPKHAMRLASTYLPTMRK IADEYRRQGIWSRA
Specific function: Unknown
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI87082240, Length=184, Percent_Identity=27.7173913043478, Blast_Score=69, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18751; Mature: 18751
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIIPFNGKSPKVAASALVADNVTLIGDVEIGEECSIWPGVVIRSDTTPIRIGNNVHIEE CEEECCCCCCCCHHHHEEEECCEEEEEECCCCCCCCCCCCEEEECCCCCEEECCEEEECC NSVLHTSTHIEDNVMIGHNCTIEAFVGHDCMIGNTAALMPLSRVGAHCAIAAGSVVLEQV CCEEEEECCCCCCEEECCCCEEEEEECCCEEECCCHHHCCHHHHCCEEEEECCHHEEECC EIPEYCFAVGAPAKVHSKIDPGNPKHAMRLASTYLPTMRKIADEYRRQGIWSRA CCCHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIIIPFNGKSPKVAASALVADNVTLIGDVEIGEECSIWPGVVIRSDTTPIRIGNNVHIEE CEEECCCCCCCCHHHHEEEECCEEEEEECCCCCCCCCCCCEEEECCCCCEEECCEEEECC NSVLHTSTHIEDNVMIGHNCTIEAFVGHDCMIGNTAALMPLSRVGAHCAIAAGSVVLEQV CCEEEEECCCCCCEEECCCCEEEEEECCCEEECCCHHHCCHHHHCCEEEEECCHHEEECC EIPEYCFAVGAPAKVHSKIDPGNPKHAMRLASTYLPTMRKIADEYRRQGIWSRA CCCHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]