| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is uhpB [C]
Identifier: 158318088
GI number: 158318088
Start: 7711547
End: 7712875
Strand: Reverse
Name: uhpB [C]
Synonym: Franean1_6352
Alternate gene names: 158318088
Gene position: 7712875-7711547 (Counterclockwise)
Preceding gene: 158318092
Following gene: 158318087
Centisome position: 85.87
GC content: 69.45
Gene sequence:
>1329_bases ATGGGGGAGGTGCTCGGGGGTGGCGGTGAGCATTATGGAGCAGTGCCGCTCATTGTCGCTGCCCTGCTCCGGCCAGCCGT CTACACACGCTGGCTGCACCTGGCCATGGGCGGGGTCTTCGCTGGCACCTGTGTCATGGTGGTACCCGGTTTCGACGAAT CCCTGCCACGCACCCTGCTTTTCTGCCTGATCTCCCCATTGCCGTTGCTGGCGCTCGCCGCGATCGTGCCCGGGACCCGC CACGCGGAGGGTGTCCAGGCGCGATGGCTCCTGAAACCGCGGGATGGCGCCGAGATCAGCCTCGCGCCCTCGCGTACACT GTACGACCGGCGGCGGACCGGGCTTTGGCTGGTCTTCCGCGTCTGGCTCGGAGTTGCCGTCCTGGCACTGACGGCCAACG GGTTCACCCTCGCCGTCCAGATCGGTTTTGCCCCTTTCCGGCAAGGACCACTGCAGGTCGCCGGAATCCGGGTACTGGAC AGTGATCGCCTTCTTCTGGGGCCACTCCTGGCGCCGCCCCTGATCCTTGCCCTGATGTGGACGATCGTCGCGGCCGGCGC GCTTCAGGTGCGAGCGGCCCGGGCCCTCCTCGGCCCGTCTCCGGCCGAGCGGCTGGTGGAGGTCGAGCACCGGGCTGAGC AGCTCCTGGAACGCAACCGACTCGCCGCGGAGCTGCACGACTCCATCGGCCATGCACTCACCCTGACCATCCTGCAGGCA GGCGCGGCAAGAGAGCTCGCGGCCACCGATCCCGCGTTCGTCCACCGTGCCCTGACAGTCATCGAGGAGACCGGGCGGCG CGCCATGGACGATCTCGAACGGACCCTGGGGCTCCTCCGCGACGCCCCGATGGGACCGCGGGCCCGTCCCACGCTGGCCG AGCTCGACACCCTGCTGGACAGCGCACGGACCGCAGGAACCCCGATCCTCGCCGACGTCAGTCCACGGACCGACGACATC CCCGGGGTCGTGTCGCGGGAGGCCTACCGGATCCTGCAGGAGGCGGTGACCAACGCACTGCGGCATGCGCCGGGCCGCAC GGTGGCGATCGACGTCGCTGTGGACGACGCCTGCCTGGAGCTGCGTGTCGTCAACCCACTGCCCGCCAGGCCTGCCAGCC CACCGCGGCAGGACGGCAAAGGCCTGCGAGGAGCGAGGGAACGTGCCGTCCTCCTCGGCGGCGAGTTCAGCGCGAAGCCC CAGGACGACCACTGGATCGTCGAAGCCCGGCTTCCCCTCGGCATGGGATTCGGTGTTCAGGCTGTGCGTCGCGACCTGGT CGGTTCCAGTTACGACAATGGCACCGCCACAGCGGACGGTCGGTCGTGA
Upstream 100 bases:
>100_bases GAGCCCGGGGCGGTCGTTCCTCCTTAGTTGTCATGGTCGTAGTAAGCGCCATGGCACGCTACGAGCGGATCCCCCGGCGG TCTTGACTTCGCTCCCTCTC
Downstream 100 bases:
>100_bases CAGCGGACGGCCGCTGGGAAGATCCCGGTTGTGTCCGCGACACCCCGAACATCAAACGCGCCCAGGCTGGCCCGGTGCCG GTTTCAGTCCTCCTTGTCGA
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: Histidine Kinase; Signal Transduction Histidine Kinase; Two-Component System Histidine Kinase; Two Component System Sensor Kinase; Signal Transduction Histidine Kinase-Like Protein; Histidine Kinase Dimerization And Phosphoacceptor Region; Two-Component Sensor Kinase; Histidine Kinase Dimerisation And Phosphoacceptor Region; Two-Component Histidine Kinase; Sensor Kinase; Sensor Histidine Kinase; Two Component Transcriptional Regulator; Sensor Kinase Two-Component System; Chitinase Two-Component Sensor Kinase; Sensor Signal Transduction Histidine Kinase; Two-Component Chitin Sensor Kinase; Two Component Sensor Kinase; Sensor-Histidine Kinase; Periplasmic Sensor Signal Transduction Histidine Kinase; LigA Protein; Two-Component Sensor; Two-Component System Response Regulator; Regulatory Protein LuxR; Receptor-Like Histidine Kinase Of 2 Component System; Two-Component System Sensor Protein
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MGEVLGGGGEHYGAVPLIVAALLRPAVYTRWLHLAMGGVFAGTCVMVVPGFDESLPRTLLFCLISPLPLLALAAIVPGTR HAEGVQARWLLKPRDGAEISLAPSRTLYDRRRTGLWLVFRVWLGVAVLALTANGFTLAVQIGFAPFRQGPLQVAGIRVLD SDRLLLGPLLAPPLILALMWTIVAAGALQVRAARALLGPSPAERLVEVEHRAEQLLERNRLAAELHDSIGHALTLTILQA GAARELAATDPAFVHRALTVIEETGRRAMDDLERTLGLLRDAPMGPRARPTLAELDTLLDSARTAGTPILADVSPRTDDI PGVVSREAYRILQEAVTNALRHAPGRTVAIDVAVDDACLELRVVNPLPARPASPPRQDGKGLRGARERAVLLGGEFSAKP QDDHWIVEARLPLGMGFGVQAVRRDLVGSSYDNGTATADGRS
Sequences:
>Translated_442_residues MGEVLGGGGEHYGAVPLIVAALLRPAVYTRWLHLAMGGVFAGTCVMVVPGFDESLPRTLLFCLISPLPLLALAAIVPGTR HAEGVQARWLLKPRDGAEISLAPSRTLYDRRRTGLWLVFRVWLGVAVLALTANGFTLAVQIGFAPFRQGPLQVAGIRVLD SDRLLLGPLLAPPLILALMWTIVAAGALQVRAARALLGPSPAERLVEVEHRAEQLLERNRLAAELHDSIGHALTLTILQA GAARELAATDPAFVHRALTVIEETGRRAMDDLERTLGLLRDAPMGPRARPTLAELDTLLDSARTAGTPILADVSPRTDDI PGVVSREAYRILQEAVTNALRHAPGRTVAIDVAVDDACLELRVVNPLPARPASPPRQDGKGLRGARERAVLLGGEFSAKP QDDHWIVEARLPLGMGFGVQAVRRDLVGSSYDNGTATADGRS >Mature_441_residues GEVLGGGGEHYGAVPLIVAALLRPAVYTRWLHLAMGGVFAGTCVMVVPGFDESLPRTLLFCLISPLPLLALAAIVPGTRH AEGVQARWLLKPRDGAEISLAPSRTLYDRRRTGLWLVFRVWLGVAVLALTANGFTLAVQIGFAPFRQGPLQVAGIRVLDS DRLLLGPLLAPPLILALMWTIVAAGALQVRAARALLGPSPAERLVEVEHRAEQLLERNRLAAELHDSIGHALTLTILQAG AARELAATDPAFVHRALTVIEETGRRAMDDLERTLGLLRDAPMGPRARPTLAELDTLLDSARTAGTPILADVSPRTDDIP GVVSREAYRILQEAVTNALRHAPGRTVAIDVAVDDACLELRVVNPLPARPASPPRQDGKGLRGARERAVLLGGEFSAKPQ DDHWIVEARLPLGMGFGVQAVRRDLVGSSYDNGTATADGRS
Specific function: Member Of The Two-Component Regulatory System Uhpb/Uhpa Involved In The Regulation Of The Uptake Of Hexose Phosphates. Uhpb Functions As A Membrane-Associated Protein Kinase That Phosphorylates Uhpa In Response To Environmental Signals. [C]
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.3.- [C]
Molecular weight: Translated: 47275; Mature: 47143
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEVLGGGGEHYGAVPLIVAALLRPAVYTRWLHLAMGGVFAGTCVMVVPGFDESLPRTLL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHH FCLISPLPLLALAAIVPGTRHAEGVQARWLLKPRDGAEISLAPSRTLYDRRRTGLWLVFR HHHHCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEECCCHHHHHHHHCCHHHHHH VWLGVAVLALTANGFTLAVQIGFAPFRQGPLQVAGIRVLDSDRLLLGPLLAPPLILALMW HHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCEEHHHHHHHHHHHHHHH TIVAAGALQVRAARALLGPSPAERLVEVEHRAEQLLERNRLAAELHDSIGHALTLTILQA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GAARELAATDPAFVHRALTVIEETGRRAMDDLERTLGLLRDAPMGPRARPTLAELDTLLD CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH SARTAGTPILADVSPRTDDIPGVVSREAYRILQEAVTNALRHAPGRTVAIDVAVDDACLE HHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEE LRVVNPLPARPASPPRQDGKGLRGARERAVLLGGEFSAKPQDDHWIVEARLPLGMGFGVQ EEEECCCCCCCCCCCCCCCCCCCCHHHCEEEECCCCCCCCCCCCEEEEEECCCCCCCCHH AVRRDLVGSSYDNGTATADGRS HHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GEVLGGGGEHYGAVPLIVAALLRPAVYTRWLHLAMGGVFAGTCVMVVPGFDESLPRTLL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHH FCLISPLPLLALAAIVPGTRHAEGVQARWLLKPRDGAEISLAPSRTLYDRRRTGLWLVFR HHHHCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEECCCHHHHHHHHCCHHHHHH VWLGVAVLALTANGFTLAVQIGFAPFRQGPLQVAGIRVLDSDRLLLGPLLAPPLILALMW HHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCEEHHHHHHHHHHHHHHH TIVAAGALQVRAARALLGPSPAERLVEVEHRAEQLLERNRLAAELHDSIGHALTLTILQA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GAARELAATDPAFVHRALTVIEETGRRAMDDLERTLGLLRDAPMGPRARPTLAELDTLLD CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH SARTAGTPILADVSPRTDDIPGVVSREAYRILQEAVTNALRHAPGRTVAIDVAVDDACLE HHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEE LRVVNPLPARPASPPRQDGKGLRGARERAVLLGGEFSAKPQDDHWIVEARLPLGMGFGVQ EEEECCCCCCCCCCCCCCCCCCCCHHHCEEEECCCCCCCCCCCCEEEEEECCCCCCCCHH AVRRDLVGSSYDNGTATADGRS HHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with a nitrogenous group as acceptor [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA