Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318074

Identifier: 158318074

GI number: 158318074

Start: 7694896

End: 7695330

Strand: Direct

Name: 158318074

Synonym: Franean1_6335

Alternate gene names: NA

Gene position: 7694896-7695330 (Clockwise)

Preceding gene: 158318073

Following gene: 158318077

Centisome position: 85.67

GC content: 66.44

Gene sequence:

>435_bases
TTGGCCTGGGCTGACATCGACGGCCACCCGGAGAACTGGCCCCGCTGGCGAACGCTGCTCCCCCACCTCCGCACCATCCT
CGACAACCACCCCGACCACGATCGATGGGATGACGACGTCCCCCAAGCGGTGTCCTGGCTGTGCGACCTCACCGGTACCT
ACCTCGACCAGCACGGACAGCCTGACATTGCCATCCCCTACCTCACTCGCGCACTGGCCCTCGACGAATCCCACCTCGGA
CCCGACCACCCCGACACCATGACCAGCCGCAACAACCTCGGCCTCGCTTACCAGGCGGCGAGACGCCTCGACGAGGCCAT
CACCCTGCACCAGCAAAACCTCACCGACATGGTGCGCGTCCTCGGACCCGACCACCCTCATACCGAGCTCTCCCGACGAA
ACCTCACTGCTGCCCGAGCCGCACGCGACGGCTAA

Upstream 100 bases:

>100_bases
GTGCGCCCTGTGTGCCCCTGAAGCCATCCCCCTCGACCTCATCAGCGACAACGTCGAGGAACTACCCGCCAGCCCGCTCC
ACGACGCTACCGGTGACCCC

Downstream 100 bases:

>100_bases
AAGCAGCAGCGGCCGGACCAGCAGTACCCATCAGACCGCCGCAGAGCGGTACACGGGCGCTCTCTGGAGTCTCGTCGAGG
AAGAACACGCCCGCGAGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MAWADIDGHPENWPRWRTLLPHLRTILDNHPDHDRWDDDVPQAVSWLCDLTGTYLDQHGQPDIAIPYLTRALALDESHLG
PDHPDTMTSRNNLGLAYQAARRLDEAITLHQQNLTDMVRVLGPDHPHTELSRRNLTAARAARDG

Sequences:

>Translated_144_residues
MAWADIDGHPENWPRWRTLLPHLRTILDNHPDHDRWDDDVPQAVSWLCDLTGTYLDQHGQPDIAIPYLTRALALDESHLG
PDHPDTMTSRNNLGLAYQAARRLDEAITLHQQNLTDMVRVLGPDHPHTELSRRNLTAARAARDG
>Mature_143_residues
AWADIDGHPENWPRWRTLLPHLRTILDNHPDHDRWDDDVPQAVSWLCDLTGTYLDQHGQPDIAIPYLTRALALDESHLGP
DHPDTMTSRNNLGLAYQAARRLDEAITLHQQNLTDMVRVLGPDHPHTELSRRNLTAARAARDG

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16414; Mature: 16283

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWADIDGHPENWPRWRTLLPHLRTILDNHPDHDRWDDDVPQAVSWLCDLTGTYLDQHGQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDIAIPYLTRALALDESHLGPDHPDTMTSRNNLGLAYQAARRLDEAITLHQQNLTDMVRV
CCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGPDHPHTELSRRNLTAARAARDG
HCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AWADIDGHPENWPRWRTLLPHLRTILDNHPDHDRWDDDVPQAVSWLCDLTGTYLDQHGQ
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDIAIPYLTRALALDESHLGPDHPDTMTSRNNLGLAYQAARRLDEAITLHQQNLTDMVRV
CCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGPDHPHTELSRRNLTAARAARDG
HCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA