| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318052
Identifier: 158318052
GI number: 158318052
Start: 7666379
End: 7666765
Strand: Reverse
Name: 158318052
Synonym: Franean1_6312
Alternate gene names: NA
Gene position: 7666765-7666379 (Counterclockwise)
Preceding gene: 158318053
Following gene: 158318050
Centisome position: 85.36
GC content: 71.32
Gene sequence:
>387_bases ATGTTGCCGTGGGGTGCGGACACCTGGGCGGTGGTGATCCAACCCGGGTCGGGCCTGGCGGATCTGCAACGGGCGCTGGC GGAGCTTCCGGCGGCTCTGGAGTTCCACTCGGTGCACGGCGATGGGGACGTCATCCTCGTCTACCAGCTGCCGGCCGGGC AGGTGTCGCGCCGGGACTTGCTGCGGCTGACCGGCTCGGCGCTCGACATCCCGACCGGGTTCCCGGACCGGTCGCGGTGG ATCACTCGGGAGGAACGGCATGCCTACCGGGCGGGGCACGCGGATGCGTTCGACGCGATCCGCGTCTTCCTGAGCCGTCC CACCGGCGGCACCCCGGACGAAACAGGAACGGGCTCGGTCGATCCTCGGGGGGTTGACCGGGCCTGA
Upstream 100 bases:
>100_bases ACCTGGTTACACGACGCGCACGGCGTCATCGGTGACCGCACACCAGGCCCGGCCACCCCGTGCAGATGCGGTGCGGGATC GGTCGCTGGCGGCGGTGGTG
Downstream 100 bases:
>100_bases ACCGGCGATGGGCCGGATCTGGTGGCTACCACGCCACCGGATCCGGCCCTTTTGCATGCCCTGCCGGGGCTACCGGACGC TGTCGTACGGCTCGGCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MLPWGADTWAVVIQPGSGLADLQRALAELPAALEFHSVHGDGDVILVYQLPAGQVSRRDLLRLTGSALDIPTGFPDRSRW ITREERHAYRAGHADAFDAIRVFLSRPTGGTPDETGTGSVDPRGVDRA
Sequences:
>Translated_128_residues MLPWGADTWAVVIQPGSGLADLQRALAELPAALEFHSVHGDGDVILVYQLPAGQVSRRDLLRLTGSALDIPTGFPDRSRW ITREERHAYRAGHADAFDAIRVFLSRPTGGTPDETGTGSVDPRGVDRA >Mature_128_residues MLPWGADTWAVVIQPGSGLADLQRALAELPAALEFHSVHGDGDVILVYQLPAGQVSRRDLLRLTGSALDIPTGFPDRSRW ITREERHAYRAGHADAFDAIRVFLSRPTGGTPDETGTGSVDPRGVDRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13828; Mature: 13828
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPWGADTWAVVIQPGSGLADLQRALAELPAALEFHSVHGDGDVILVYQLPAGQVSRRDL CCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCHHHH LRLTGSALDIPTGFPDRSRWITREERHAYRAGHADAFDAIRVFLSRPTGGTPDETGTGSV HHHCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC DPRGVDRA CCCCCCCC >Mature Secondary Structure MLPWGADTWAVVIQPGSGLADLQRALAELPAALEFHSVHGDGDVILVYQLPAGQVSRRDL CCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCHHHH LRLTGSALDIPTGFPDRSRWITREERHAYRAGHADAFDAIRVFLSRPTGGTPDETGTGSV HHHCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC DPRGVDRA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA