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The map label for this gene is int [H]

Identifier: 158318043

GI number: 158318043

Start: 7659082

End: 7660332

Strand: Reverse

Name: int [H]

Synonym: Franean1_6303

Alternate gene names: 158318043

Gene position: 7660332-7659082 (Counterclockwise)

Preceding gene: 158318044

Following gene: 158318041

Centisome position: 85.28

GC content: 67.63

Gene sequence:

>1251_bases
ATGACCGGGCAGGACCCTCGCGGTGACGAGGACACCCCGGACGAGTCGACCGGCAGGAAGAAGAAGCAGAACCGCCGGGC
GCAGGGCGAGGGCTCGGTGTACTGGCGTGAGGACCGTCAGCGTTGGGTCATCGAGATCGACTACGGAGTGGTGAACGGCC
GGCGCAAGCGCGTGCCGCGCTACTTCCGGACGCAGGAAGAGGCGATCGAGGAGCAGCGGAAGGCGCGGCAGAGCAAGGCG
GACGGGCTGACCACCCTCGACCGGCGGTCGCGGTTCGCGGACTTCCTGACGTACTGGCTGGACGAGATCGTCGACCCGTC
TGAACGGGCGGAGTCCACGAAGTCGAACTACCGCGTCATGGTGAACAACCACATCCGCCCGGCGCTCGGCTCGCGCCGGC
TCGTCGAACTGAAGCACGAGGATCTTCAGCGGTTCCTGAACCGCAAGGCGGCGGATGGGTACAGCACGTCGACCATGCGC
ACGCTGCGTTCCGTCCTGCGCCAAGCGCTCAACGAAGCGGTCATCACCGAGAAGATCAGTCGCAATGTCGCCGAGACGCT
GCGGGTCCCGAAAGCGCGGAAACCGAAGCGGAATGTGGCCGCGCTGAGCAGGGACGACGGGCTGCGGCTGCTCGCCGAAG
CGAAGTCCACCCGGCATTACGCGCTGTATGTGCTGCTGGCGATGGTCGGTCTACGCCGTGGGGAAGCGCTCGCGTTGCGC
TGGTCCGACTTCGACGAATCGGCAGGCACGCTGCGGGTGGTACGCCAGGTGACCCGGGTGAGCGGCGTGAAGGGGCTGGT
CGTCGGCCCGACGAAGAGTCAGGCCGGAACACGCACGCTCACGCTGCCGACCCGATGCGTCCGGGTGCTCCAGGCACACC
GCACCGCCCAGCACGCCCACCGGCAGGCCGCGGGGAAGCGGTGGAAGGAGAACGGGCTGATCTTCCCGAGTACCGTCGGC
ACGCACATGGAGCCGCGCGGGCTGAACACCCACCTGTCCAAGCTGTGCCAGCGTGCCGGGCTGCCGCACCTCGGCCCGCA
CGCGCTGCGGCACACCGCGGCCACGATGGCCTACGCGCTCGGTGTCGACTGGAAGCAGATACAGCAGATGCTCGGCCACA
CGATGCTGTCGACCACGATGGACATCTACGTGGACCTGGTCGACAGCGTCCACCGCGACGCGGCGTCCAAACTCGACGCG
TGGTTCGACGAACCTGATGAAGACGGTGGGCTCAGCCCAGCACAGCGGTAG

Upstream 100 bases:

>100_bases
GTGAGTCCAAGTTCGCCTGCGACATGGGCGACAACCGGTACGGGTGCCCCTGGTGCGACAACATCGAATGGCCCGACGGC
AACCCGCTGGACGTGGCCTG

Downstream 100 bases:

>100_bases
CGAGCAACGTGCTGATCATCGATCCAGTTACCCTTGCGGCGATCTTCATCTTGCCCTCCTTCGTCATCCATCCCTTGACC
CGACGAAACAAGCGGGAGCC

Product: integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MTGQDPRGDEDTPDESTGRKKKQNRRAQGEGSVYWREDRQRWVIEIDYGVVNGRRKRVPRYFRTQEEAIEEQRKARQSKA
DGLTTLDRRSRFADFLTYWLDEIVDPSERAESTKSNYRVMVNNHIRPALGSRRLVELKHEDLQRFLNRKAADGYSTSTMR
TLRSVLRQALNEAVITEKISRNVAETLRVPKARKPKRNVAALSRDDGLRLLAEAKSTRHYALYVLLAMVGLRRGEALALR
WSDFDESAGTLRVVRQVTRVSGVKGLVVGPTKSQAGTRTLTLPTRCVRVLQAHRTAQHAHRQAAGKRWKENGLIFPSTVG
THMEPRGLNTHLSKLCQRAGLPHLGPHALRHTAATMAYALGVDWKQIQQMLGHTMLSTTMDIYVDLVDSVHRDAASKLDA
WFDEPDEDGGLSPAQR

Sequences:

>Translated_416_residues
MTGQDPRGDEDTPDESTGRKKKQNRRAQGEGSVYWREDRQRWVIEIDYGVVNGRRKRVPRYFRTQEEAIEEQRKARQSKA
DGLTTLDRRSRFADFLTYWLDEIVDPSERAESTKSNYRVMVNNHIRPALGSRRLVELKHEDLQRFLNRKAADGYSTSTMR
TLRSVLRQALNEAVITEKISRNVAETLRVPKARKPKRNVAALSRDDGLRLLAEAKSTRHYALYVLLAMVGLRRGEALALR
WSDFDESAGTLRVVRQVTRVSGVKGLVVGPTKSQAGTRTLTLPTRCVRVLQAHRTAQHAHRQAAGKRWKENGLIFPSTVG
THMEPRGLNTHLSKLCQRAGLPHLGPHALRHTAATMAYALGVDWKQIQQMLGHTMLSTTMDIYVDLVDSVHRDAASKLDA
WFDEPDEDGGLSPAQR
>Mature_415_residues
TGQDPRGDEDTPDESTGRKKKQNRRAQGEGSVYWREDRQRWVIEIDYGVVNGRRKRVPRYFRTQEEAIEEQRKARQSKAD
GLTTLDRRSRFADFLTYWLDEIVDPSERAESTKSNYRVMVNNHIRPALGSRRLVELKHEDLQRFLNRKAADGYSTSTMRT
LRSVLRQALNEAVITEKISRNVAETLRVPKARKPKRNVAALSRDDGLRLLAEAKSTRHYALYVLLAMVGLRRGEALALRW
SDFDESAGTLRVVRQVTRVSGVKGLVVGPTKSQAGTRTLTLPTRCVRVLQAHRTAQHAHRQAAGKRWKENGLIFPSTVGT
HMEPRGLNTHLSKLCQRAGLPHLGPHALRHTAATMAYALGVDWKQIQQMLGHTMLSTTMDIYVDLVDSVHRDAASKLDAW
FDEPDEDGGLSPAQR

Specific function: Required for integration of pSAM2 [H]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1787607, Length=253, Percent_Identity=24.5059288537549, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 47215; Mature: 47084

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGQDPRGDEDTPDESTGRKKKQNRRAQGEGSVYWREDRQRWVIEIDYGVVNGRRKRVPR
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCEEEEEECCEECCHHHHCCH
YFRTQEEAIEEQRKARQSKADGLTTLDRRSRFADFLTYWLDEIVDPSERAESTKSNYRVM
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEE
VNNHIRPALGSRRLVELKHEDLQRFLNRKAADGYSTSTMRTLRSVLRQALNEAVITEKIS
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RNVAETLRVPKARKPKRNVAALSRDDGLRLLAEAKSTRHYALYVLLAMVGLRRGEALALR
HHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEE
WSDFDESAGTLRVVRQVTRVSGVKGLVVGPTKSQAGTRTLTLPTRCVRVLQAHRTAQHAH
ECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHHH
RQAAGKRWKENGLIFPSTVGTHMEPRGLNTHLSKLCQRAGLPHLGPHALRHTAATMAYAL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
GVDWKQIQQMLGHTMLSTTMDIYVDLVDSVHRDAASKLDAWFDEPDEDGGLSPAQR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGQDPRGDEDTPDESTGRKKKQNRRAQGEGSVYWREDRQRWVIEIDYGVVNGRRKRVPR
CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCEEEEEECCEECCHHHHCCH
YFRTQEEAIEEQRKARQSKADGLTTLDRRSRFADFLTYWLDEIVDPSERAESTKSNYRVM
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEE
VNNHIRPALGSRRLVELKHEDLQRFLNRKAADGYSTSTMRTLRSVLRQALNEAVITEKIS
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RNVAETLRVPKARKPKRNVAALSRDDGLRLLAEAKSTRHYALYVLLAMVGLRRGEALALR
HHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEE
WSDFDESAGTLRVVRQVTRVSGVKGLVVGPTKSQAGTRTLTLPTRCVRVLQAHRTAQHAH
ECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHHH
RQAAGKRWKENGLIFPSTVGTHMEPRGLNTHLSKLCQRAGLPHLGPHALRHTAATMAYAL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
GVDWKQIQQMLGHTMLSTTMDIYVDLVDSVHRDAASKLDAWFDEPDEDGGLSPAQR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2721504; 9620953 [H]