| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318036
Identifier: 158318036
GI number: 158318036
Start: 7648412
End: 7648699
Strand: Direct
Name: 158318036
Synonym: Franean1_6296
Alternate gene names: NA
Gene position: 7648412-7648699 (Clockwise)
Preceding gene: 158318035
Following gene: 158318038
Centisome position: 85.15
GC content: 69.44
Gene sequence:
>288_bases ATGACGACAACCTCAGGCGTCACCGTCCGGGCGACGCCACAGGCGTCGACCGCCGTCGACGATCTCGCCGGCATCATCAA CGGCCCGCTGCTGGCCCACTTCGACAACCTGCGCGCCACCGCCCGGGTCCTCCTGGAGCCGGAGAACTGGGACGGTCGCA CCGCCACCGAGTTCCGCACGTCGATCTGGCCGACGTACGAACGCACCCTGACCGACCTGCACACCCAGCTCGACCGGTTG CGCATCCGCCTCGCCGAGATCCAGACCGACATCCAGGCGGCCGGCTGA
Upstream 100 bases:
>100_bases CAACCAGCGGACCGCGCTGGCCGGTAGCTGACCGCCCCGACCAGCGCTCCCAGGCGCGACCCGAAGAGCCCGACACGCCC CTCTGCCCCAGGAGCATCTG
Downstream 100 bases:
>100_bases CGAGGTTGTCACCGGGCGCCGCCCTGGCTGGGTGGGCGCTGCCGAGCGGGGTCGTCAGAGACCGGCCCCCGAGGGCTCCG TGAGCAGGTTGACGGCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MTTTSGVTVRATPQASTAVDDLAGIINGPLLAHFDNLRATARVLLEPENWDGRTATEFRTSIWPTYERTLTDLHTQLDRL RIRLAEIQTDIQAAG
Sequences:
>Translated_95_residues MTTTSGVTVRATPQASTAVDDLAGIINGPLLAHFDNLRATARVLLEPENWDGRTATEFRTSIWPTYERTLTDLHTQLDRL RIRLAEIQTDIQAAG >Mature_94_residues TTTSGVTVRATPQASTAVDDLAGIINGPLLAHFDNLRATARVLLEPENWDGRTATEFRTSIWPTYERTLTDLHTQLDRLR IRLAEIQTDIQAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10519; Mature: 10388
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTSGVTVRATPQASTAVDDLAGIINGPLLAHFDNLRATARVLLEPENWDGRTATEFRT CCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHEEHEEECCCCCCCCCHHHHHH SIWPTYERTLTDLHTQLDRLRIRLAEIQTDIQAAG HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTTSGVTVRATPQASTAVDDLAGIINGPLLAHFDNLRATARVLLEPENWDGRTATEFRT CCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHEEHEEECCCCCCCCCHHHHHH SIWPTYERTLTDLHTQLDRLRIRLAEIQTDIQAAG HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA