| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318023
Identifier: 158318023
GI number: 158318023
Start: 7630995
End: 7631636
Strand: Reverse
Name: 158318023
Synonym: Franean1_6283
Alternate gene names: NA
Gene position: 7631636-7630995 (Counterclockwise)
Preceding gene: 158318025
Following gene: 158318022
Centisome position: 84.97
GC content: 66.36
Gene sequence:
>642_bases ATGACCTCCATGTTCACACCCTCGGACCGTGACCGGCTGCTGGAGCTGATGGAGCCTCTGTGCGGGCCGCTGTACCGCTC ACTCGATCGAGCTGTTGACCTCTCGTGGCAGCACTTCGACGGGCACGGGATGACCGGTGATCACTACTCCGCTGGGCGCT GGCAGCTCGCCAGGGCACACGCGCTCCGGCTCATCGAAGATGAACAGCTCACGGGCGACCTGGGGCGCTGGTCGTTGAAG CGACCACGCGGCAACCTGCAGCTCTGCTTGCACCAGGGTGCGGCGAAGCTGCGCCTCCTCCGTCCGGGAGTCGACGACGC ACCTCCGCCAGGGCCGAACAGGGCACGGGTCGCCTACTTCACCAACAACCAGGCGAACCTCTTCGGCGTCGACGGCAGTC ACTTCATCGGCCTCTGGTCGCGGGACCCCGAGACCGGCGAGGTTGAGCTTCGCGTCGTCCGTCCGCGCGGCGCCTGGGAC TTCGGGAGGAAGGCGAAGCTCGACCTCGACCTGATCCTGCCGCGACAGTCCGAGGATCTTGGCCGGCTGGAGTTCAGGCC GGACGACGAGGACATCGACCTGCAACTGCCGTTCGACGACACCGAGGAGGGGGGGAACGAAAATGCTGGCGGCAATGCAT GA
Upstream 100 bases:
>100_bases ACGGTCTGCCTCCTGGCGAGGTGCGATCGACAGGACGTCCGGTCCCAACCCCGGACACGCCGTGAGGGGTAGTTTGGGGT GTGAGATCTGAGGTCATATT
Downstream 100 bases:
>100_bases CGGCCAGTCGGCGTACGCGGGCGAGCGCATCCGAGCGGCTCGTACGCTGCTCGGCCTCTCACAGGGCGATCTAGCCGAAG CCTCCGGGGTCGGCCAGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MTSMFTPSDRDRLLELMEPLCGPLYRSLDRAVDLSWQHFDGHGMTGDHYSAGRWQLARAHALRLIEDEQLTGDLGRWSLK RPRGNLQLCLHQGAAKLRLLRPGVDDAPPPGPNRARVAYFTNNQANLFGVDGSHFIGLWSRDPETGEVELRVVRPRGAWD FGRKAKLDLDLILPRQSEDLGRLEFRPDDEDIDLQLPFDDTEEGGNENAGGNA
Sequences:
>Translated_213_residues MTSMFTPSDRDRLLELMEPLCGPLYRSLDRAVDLSWQHFDGHGMTGDHYSAGRWQLARAHALRLIEDEQLTGDLGRWSLK RPRGNLQLCLHQGAAKLRLLRPGVDDAPPPGPNRARVAYFTNNQANLFGVDGSHFIGLWSRDPETGEVELRVVRPRGAWD FGRKAKLDLDLILPRQSEDLGRLEFRPDDEDIDLQLPFDDTEEGGNENAGGNA >Mature_212_residues TSMFTPSDRDRLLELMEPLCGPLYRSLDRAVDLSWQHFDGHGMTGDHYSAGRWQLARAHALRLIEDEQLTGDLGRWSLKR PRGNLQLCLHQGAAKLRLLRPGVDDAPPPGPNRARVAYFTNNQANLFGVDGSHFIGLWSRDPETGEVELRVVRPRGAWDF GRKAKLDLDLILPRQSEDLGRLEFRPDDEDIDLQLPFDDTEEGGNENAGGNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23981; Mature: 23850
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSMFTPSDRDRLLELMEPLCGPLYRSLDRAVDLSWQHFDGHGMTGDHYSAGRWQLARAH CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEHHHHH ALRLIEDEQLTGDLGRWSLKRPRGNLQLCLHQGAAKLRLLRPGVDDAPPPGPNRARVAYF HHHHCCCCCCCCCCCCCEECCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEE TNNQANLFGVDGSHFIGLWSRDPETGEVELRVVRPRGAWDFGRKAKLDLDLILPRQSEDL ECCCCEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCEECEEEEECCCCCCCC GRLEFRPDDEDIDLQLPFDDTEEGGNENAGGNA CCEEECCCCCCEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSMFTPSDRDRLLELMEPLCGPLYRSLDRAVDLSWQHFDGHGMTGDHYSAGRWQLARAH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEHHHHH ALRLIEDEQLTGDLGRWSLKRPRGNLQLCLHQGAAKLRLLRPGVDDAPPPGPNRARVAYF HHHHCCCCCCCCCCCCCEECCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEE TNNQANLFGVDGSHFIGLWSRDPETGEVELRVVRPRGAWDFGRKAKLDLDLILPRQSEDL ECCCCEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCEECEEEEECCCCCCCC GRLEFRPDDEDIDLQLPFDDTEEGGNENAGGNA CCEEECCCCCCEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA