| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318007
Identifier: 158318007
GI number: 158318007
Start: 7612032
End: 7613231
Strand: Direct
Name: 158318007
Synonym: Franean1_6267
Alternate gene names: NA
Gene position: 7612032-7613231 (Clockwise)
Preceding gene: 158318006
Following gene: 158318008
Centisome position: 84.75
GC content: 75.33
Gene sequence:
>1200_bases GTGACCACCTGGGCGGAACAGCGGCGTGCGGACCGGGCCGCCGACCGGGAGCAGGCACGCCAGGATCGCGCGGCGGCGCG GGAGCAGGTACGCGCAGCGCAGGCCCACACCGCCACGCTGGCCGCGCAGGCCCGCGCCGAGAAGGAACAGCGGGCCGCGC AGCGGCGAGCCGACAAGGCCGCGCGGAAGGCACGCCGCGCTGCCTGGCGCGCCGACCGCGCCGTCGAACTGTGGGTGTAT CCGCTCGCGGTCGTCTCCGCGGTCATGGCGGTGCCGAGCATGGCGATCTACGGCTGGCACGTCTACGGCGGCCCGACCGG CCTCGTCCTGCCCCTGCTCTCCGAGCTGGGCGTGTGGGCGTTCGGCGCGGCCGTGCACGTGTCCCGCCGCCGCTACCCGG ATCGGCCGGTGGTGACGCTCCAGGCCGGCCTGATCGTGTTCGGGGCGGTCGCCTTCGGCCTGAACTTCGCGCACGGCGCC GAGCGATCGATCGTCACCGGCCTCGTGATGGGCATCGTGTCCATCGCCGGGCCGGGAGCCCATCAGATCGCCGTGGCGAG CCCTCCCCGGAGCCGGGCGGAACGGGCCCGCGCGCGGGTCGACCGACAGGCACAGCGGCGCCTCGACCAGGCCCGCCGCA TCGCCGTACGTACCGCGGCCGTCGAGCTGGACCGGGACGGAAACGCCCGCCTGGTGCACGTGCCCGGCCTGTACCAGCCA ACCCGCCGCAAGCTCGCCCCCGCGGTGGTCGCCGGGCTGCCCGTCGACCCGATCGACGACGGGTGGGATGCCGCGCTGGC CACCCTCGACCCAGACGCGGGGATCGTGGAACCGGCGTTGCTGACCGACCGGACAGCCGACCCGGCGGCCGACCCGACTA CCGATGGCGACCAGCACGAACGCGACGGAGAGTCGGCCTCCGGATCGGGCGGAGTCGGCCTGCTCGACCGGCCCGAGTCG GATGCCGTCGAGTCAGCAGAGAAGGCCTCCCCGCCGGCACGACGGCGCCGTCCGATCGACCCGGACGCCCGCCGGAAGTT GACCGCCGACGAGGCGCTCGGCGCGGCCCGCCGGCTCGCCACGCGGAACGGGAAGCCGGTCACCGCCGAGCAGCTCCGCA CCGCGCTGCACGTGAGCGCGAAGACTGCCCGCGAGCTCCGCGACCAGGTCAACGCCGAGGTCTTCGGGGGGTCGGCATGA
Upstream 100 bases:
>100_bases TGTCCACGGAGGATGCGGCGGCGGCCGGCTGGTTCCGCGCCCTGGCGGCTGCGGCCGAGCAGGTGGCTGACTGGCACACG GCCCGCGCTGGCGGTGCCCT
Downstream 100 bases:
>100_bases CGGGCATCCGCGCGGACCTGCGCCAGCTCCCCTGGCCACTGGCGGGCACGCTCGTCCTGCTCGGCGTCGTCGTCCTGGCC CTGCGTGCCGCCGGCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MTTWAEQRRADRAADREQARQDRAAAREQVRAAQAHTATLAAQARAEKEQRAAQRRADKAARKARRAAWRADRAVELWVY PLAVVSAVMAVPSMAIYGWHVYGGPTGLVLPLLSELGVWAFGAAVHVSRRRYPDRPVVTLQAGLIVFGAVAFGLNFAHGA ERSIVTGLVMGIVSIAGPGAHQIAVASPPRSRAERARARVDRQAQRRLDQARRIAVRTAAVELDRDGNARLVHVPGLYQP TRRKLAPAVVAGLPVDPIDDGWDAALATLDPDAGIVEPALLTDRTADPAADPTTDGDQHERDGESASGSGGVGLLDRPES DAVESAEKASPPARRRRPIDPDARRKLTADEALGAARRLATRNGKPVTAEQLRTALHVSAKTARELRDQVNAEVFGGSA
Sequences:
>Translated_399_residues MTTWAEQRRADRAADREQARQDRAAAREQVRAAQAHTATLAAQARAEKEQRAAQRRADKAARKARRAAWRADRAVELWVY PLAVVSAVMAVPSMAIYGWHVYGGPTGLVLPLLSELGVWAFGAAVHVSRRRYPDRPVVTLQAGLIVFGAVAFGLNFAHGA ERSIVTGLVMGIVSIAGPGAHQIAVASPPRSRAERARARVDRQAQRRLDQARRIAVRTAAVELDRDGNARLVHVPGLYQP TRRKLAPAVVAGLPVDPIDDGWDAALATLDPDAGIVEPALLTDRTADPAADPTTDGDQHERDGESASGSGGVGLLDRPES DAVESAEKASPPARRRRPIDPDARRKLTADEALGAARRLATRNGKPVTAEQLRTALHVSAKTARELRDQVNAEVFGGSA >Mature_398_residues TTWAEQRRADRAADREQARQDRAAAREQVRAAQAHTATLAAQARAEKEQRAAQRRADKAARKARRAAWRADRAVELWVYP LAVVSAVMAVPSMAIYGWHVYGGPTGLVLPLLSELGVWAFGAAVHVSRRRYPDRPVVTLQAGLIVFGAVAFGLNFAHGAE RSIVTGLVMGIVSIAGPGAHQIAVASPPRSRAERARARVDRQAQRRLDQARRIAVRTAAVELDRDGNARLVHVPGLYQPT RRKLAPAVVAGLPVDPIDDGWDAALATLDPDAGIVEPALLTDRTADPAADPTTDGDQHERDGESASGSGGVGLLDRPESD AVESAEKASPPARRRRPIDPDARRKLTADEALGAARRLATRNGKPVTAEQLRTALHVSAKTARELRDQVNAEVFGGSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42807; Mature: 42676
Theoretical pI: Translated: 11.01; Mature: 11.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTWAEQRRADRAADREQARQDRAAAREQVRAAQAHTATLAAQARAEKEQRAAQRRADKA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARKARRAAWRADRAVELWVYPLAVVSAVMAVPSMAIYGWHVYGGPTGLVLPLLSELGVWA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHHHCCHHH FGAAVHVSRRRYPDRPVVTLQAGLIVFGAVAFGLNFAHGAERSIVTGLVMGIVSIAGPGA HHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC HQIAVASPPRSRAERARARVDRQAQRRLDQARRIAVRTAAVELDRDGNARLVHVPGLYQP CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCH TRRKLAPAVVAGLPVDPIDDGWDAALATLDPDAGIVEPALLTDRTADPAADPTTDGDQHE HHHHHHHHHHHCCCCCCCCCCHHHEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCHH RDGESASGSGGVGLLDRPESDAVESAEKASPPARRRRPIDPDARRKLTADEALGAARRLA CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCHHHHHHCCHHHHHHHHHHHH TRNGKPVTAEQLRTALHVSAKTARELRDQVNAEVFGGSA HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCC >Mature Secondary Structure TTWAEQRRADRAADREQARQDRAAAREQVRAAQAHTATLAAQARAEKEQRAAQRRADKA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARKARRAAWRADRAVELWVYPLAVVSAVMAVPSMAIYGWHVYGGPTGLVLPLLSELGVWA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHHHCCHHH FGAAVHVSRRRYPDRPVVTLQAGLIVFGAVAFGLNFAHGAERSIVTGLVMGIVSIAGPGA HHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC HQIAVASPPRSRAERARARVDRQAQRRLDQARRIAVRTAAVELDRDGNARLVHVPGLYQP CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCH TRRKLAPAVVAGLPVDPIDDGWDAALATLDPDAGIVEPALLTDRTADPAADPTTDGDQHE HHHHHHHHHHHCCCCCCCCCCHHHEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCHH RDGESASGSGGVGLLDRPESDAVESAEKASPPARRRRPIDPDARRKLTADEALGAARRLA CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCHHHHHHCCHHHHHHHHHHHH TRNGKPVTAEQLRTALHVSAKTARELRDQVNAEVFGGSA HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA