Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317994

Identifier: 158317994

GI number: 158317994

Start: 7593677

End: 7594969

Strand: Reverse

Name: 158317994

Synonym: Franean1_6254

Alternate gene names: NA

Gene position: 7594969-7593677 (Counterclockwise)

Preceding gene: 158317995

Following gene: 158317993

Centisome position: 84.56

GC content: 70.61

Gene sequence:

>1293_bases
GTGGAGCCGCGTCCACGTAGCCCTGAGCTCTTCCCGCGGCGCGCCGCCGCACTCGTGTCCGCCGCGCTCGCGGACACCCG
GGTAGTCGTCGTCAACGGTGCCCGGCAGGTCGGCAAGAGCACCCTCGCCCAGCTCACGGCGGGCCAGCATGGCAACGCAC
AGGCCTACTACCTGGACGAGGAGTCGACCCGAGCCGCCGCGACGGCGGATCCGATCGGGTTCCTCAACCACCACGGCCTG
TTGATGATCGACGAGATCCAGCGTGTGCCGGAGCTGCTCCTCGCGATCAAGCGGGAGGTCGACCGGGATCAGAGCCCGGG
TCGGTTCCTTCTCACGGGCTCCGCCCGGCTGTGGGGGCTGCGCGGGATCCCCGACACCCTCCCCGGCCGGTCGGAGACCG
TCGAGCTGTGGCCGCTCGCCCAGGGCGAGATCGACGGAGGACCGGACGGCTTCGTCGACGCCGTGTTCGCCGACGACGAC
CTCGGCGCTGACCCAAGCGTTGACCTTGACCTCGCCTCCGGCGCGCTGCGGCGCGACGACTACGTCGGACGGGCGCTGCG
GGGCGGCTTCCCCGAGGCCGTCCGCCGTGCCGATCCCCGACGCCGGGCGCGGTTCTTCGAGTCCTACATCTCGGACCTGA
TCGCGCGGGACATCCGCCAGATAGCCGAGATCGAGCGGACGTCCGAGCTGCGCAGACTCGTCCAGGCGCTGGCCGCGAAC
ACGAGCGGCCTCGTCGTCCCACGCCGGCTCAGCAATGACCTGGACGTCTCCGCGTCCACGGTGGCCCGGCACATCGAGGC
ACTCGAGCTGGTCTACCTCGTGCAGCGGATCCCGGCCTGGTCCAGCAACCTCACCACCCGCGCGGTCGCGACCCCGAAGC
TCATCCTCGTCGACTCCGGGCTCGCCGGGCACCTGACCGGCATGACATCGCGGCGCGCATCGCATCCGACGGCCCCCGTG
GGCCCGCTTCTCGAGAACTTCGTGCTCGGAGAACTGGCCCGCCAGCTCACCTGGGCCGACGAGCCGGTCGCCCTTTTCCA
CTATCGCGACCGCGACCGTAACGAGGTCGACGCCGTCCTCGAACGGGCATCCGGCGAGGTCGTCGGGATCGAGGTGAAGG
CCGCCGAGACCGTGCGTGCCGAGGACTTCCGCGGGCTGCGCCGGCTCGCGGATCAGATCGGCGATCGTTTCCGTGCCGGC
TATGTTCTCTACGCCGGAGCCGAGGTCCTTCCCTTCGGCCCACGCATGCGGGCCGCCCCGATCTCAACTCTGTGGACGAC
AGGATCAGGGTAG

Upstream 100 bases:

>100_bases
TATGCATCACGCGATCATGTACAGGCATGCCATGGCCAGGTACGATTCCGATACAGTGATCGAACTTGCAGGGAGCGGTT
CCGGATCGGTGGAGGTGCCT

Downstream 100 bases:

>100_bases
GTGCCGGAGGGCGCGTGGGGCGGTCTGGGCGCGGAGACGGGCGGCGTCCTGTTCGCCGCGCGTCCCGGCCGGCGCGATCA
CGTGGTGCTGGCGTCGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MEPRPRSPELFPRRAAALVSAALADTRVVVVNGARQVGKSTLAQLTAGQHGNAQAYYLDEESTRAAATADPIGFLNHHGL
LMIDEIQRVPELLLAIKREVDRDQSPGRFLLTGSARLWGLRGIPDTLPGRSETVELWPLAQGEIDGGPDGFVDAVFADDD
LGADPSVDLDLASGALRRDDYVGRALRGGFPEAVRRADPRRRARFFESYISDLIARDIRQIAEIERTSELRRLVQALAAN
TSGLVVPRRLSNDLDVSASTVARHIEALELVYLVQRIPAWSSNLTTRAVATPKLILVDSGLAGHLTGMTSRRASHPTAPV
GPLLENFVLGELARQLTWADEPVALFHYRDRDRNEVDAVLERASGEVVGIEVKAAETVRAEDFRGLRRLADQIGDRFRAG
YVLYAGAEVLPFGPRMRAAPISTLWTTGSG

Sequences:

>Translated_430_residues
MEPRPRSPELFPRRAAALVSAALADTRVVVVNGARQVGKSTLAQLTAGQHGNAQAYYLDEESTRAAATADPIGFLNHHGL
LMIDEIQRVPELLLAIKREVDRDQSPGRFLLTGSARLWGLRGIPDTLPGRSETVELWPLAQGEIDGGPDGFVDAVFADDD
LGADPSVDLDLASGALRRDDYVGRALRGGFPEAVRRADPRRRARFFESYISDLIARDIRQIAEIERTSELRRLVQALAAN
TSGLVVPRRLSNDLDVSASTVARHIEALELVYLVQRIPAWSSNLTTRAVATPKLILVDSGLAGHLTGMTSRRASHPTAPV
GPLLENFVLGELARQLTWADEPVALFHYRDRDRNEVDAVLERASGEVVGIEVKAAETVRAEDFRGLRRLADQIGDRFRAG
YVLYAGAEVLPFGPRMRAAPISTLWTTGSG
>Mature_430_residues
MEPRPRSPELFPRRAAALVSAALADTRVVVVNGARQVGKSTLAQLTAGQHGNAQAYYLDEESTRAAATADPIGFLNHHGL
LMIDEIQRVPELLLAIKREVDRDQSPGRFLLTGSARLWGLRGIPDTLPGRSETVELWPLAQGEIDGGPDGFVDAVFADDD
LGADPSVDLDLASGALRRDDYVGRALRGGFPEAVRRADPRRRARFFESYISDLIARDIRQIAEIERTSELRRLVQALAAN
TSGLVVPRRLSNDLDVSASTVARHIEALELVYLVQRIPAWSSNLTTRAVATPKLILVDSGLAGHLTGMTSRRASHPTAPV
GPLLENFVLGELARQLTWADEPVALFHYRDRDRNEVDAVLERASGEVVGIEVKAAETVRAEDFRGLRRLADQIGDRFRAG
YVLYAGAEVLPFGPRMRAAPISTLWTTGSG

Specific function: Unknown

COG id: COG1373

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 46940; Mature: 46940

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPRPRSPELFPRRAAALVSAALADTRVVVVNGARQVGKSTLAQLTAGQHGNAQAYYLDE
CCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECC
ESTRAAATADPIGFLNHHGLLMIDEIQRVPELLLAIKREVDRDQSPGRFLLTGSARLWGL
CCCCCCCCCCCCHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEC
RGIPDTLPGRSETVELWPLAQGEIDGGPDGFVDAVFADDDLGADPSVDLDLASGALRRDD
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCHHHHH
YVGRALRGGFPEAVRRADPRRRARFFESYISDLIARDIRQIAEIERTSELRRLVQALAAN
HHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TSGLVVPRRLSNDLDVSASTVARHIEALELVYLVQRIPAWSSNLTTRAVATPKLILVDSG
CCCEEECHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECC
LAGHLTGMTSRRASHPTAPVGPLLENFVLGELARQLTWADEPVALFHYRDRDRNEVDAVL
CCHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHH
ERASGEVVGIEVKAAETVRAEDFRGLRRLADQIGDRFRAGYVLYAGAEVLPFGPRMRAAP
HHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEECCCCCCCCCC
ISTLWTTGSG
CHHEEECCCC
>Mature Secondary Structure
MEPRPRSPELFPRRAAALVSAALADTRVVVVNGARQVGKSTLAQLTAGQHGNAQAYYLDE
CCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECC
ESTRAAATADPIGFLNHHGLLMIDEIQRVPELLLAIKREVDRDQSPGRFLLTGSARLWGL
CCCCCCCCCCCCHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEC
RGIPDTLPGRSETVELWPLAQGEIDGGPDGFVDAVFADDDLGADPSVDLDLASGALRRDD
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCHHHHH
YVGRALRGGFPEAVRRADPRRRARFFESYISDLIARDIRQIAEIERTSELRRLVQALAAN
HHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TSGLVVPRRLSNDLDVSASTVARHIEALELVYLVQRIPAWSSNLTTRAVATPKLILVDSG
CCCEEECHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECC
LAGHLTGMTSRRASHPTAPVGPLLENFVLGELARQLTWADEPVALFHYRDRDRNEVDAVL
CCHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHH
ERASGEVVGIEVKAAETVRAEDFRGLRRLADQIGDRFRAGYVLYAGAEVLPFGPRMRAAP
HHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEECCCCCCCCCC
ISTLWTTGSG
CHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]