| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yecE [H]
Identifier: 158317992
GI number: 158317992
Start: 7592510
End: 7593361
Strand: Direct
Name: yecE [H]
Synonym: Franean1_6252
Alternate gene names: 158317992
Gene position: 7592510-7593361 (Clockwise)
Preceding gene: 158317989
Following gene: 158317997
Centisome position: 84.53
GC content: 71.24
Gene sequence:
>852_bases ATGCATCTGCACGTGGGGTGCGCGATGTGGACCCACAAGTCCTGGCAGGGGCGCCTGCTGGCCCATCCGCTGCCGGCCCA CGAGCGCCTGCGGCACTACGCCGCCTGGTGTAACGCGGTCGAGGGGAACACCACGTTCTATGCGACCCCGGCCCGGGAGA CCGTGGCCACGTGGGCGCGGCAGACCGACCCCGGCTTCCGGTTCGTGGTCAAGCTGCCGAAGGTCATCACGCACGAACGC CACCTCACCGACGTCGACGAGGTGCTTCGCTCGTTCCTGAACGCGATGGAGCCACTCGGCCCGCGGGCGCACGCCCTCTG GATTCAGCTGCCGGGGGCGTTCGGCCCGGCCGACGTGTCGCTGCTCGCCCGCTTTCTGCGCCGGCTCGACACGTCCCACC GGTACGCGGTGGAGGTCCGCCATCCGGCCTTCTTCGCCGACCCGCGCGCGGCGCGCCTGCTCGAGGACGCACTCGCCACC GTGGGCGCCGAATGGATTCCGTTCGACACAACCGAGTTCTTCCGCAGCCCGCCGACGAGCGACGCCGAACGGGACGCCTG GGCGAAGAAGCCCCGGATGCCGCTCCGGTCACTCGCGCTGACCGACCAGCCGATCGTCCGCTACCTCGGCCGCGACGACT CCGCCCGGACGGTCGAGGGCTGGCGGCACTGGGTCGACACCACCGTCACGTGGCTGCGCGAGGGACGATCGCCCACCGTC TTCATCCACACCCCGGACAACGCCGACGCTCCGCTGCTCGCCCGCCGTTTCCACGACGAGGTCCGGGCCCGCGTCCCCGA ACTCGGTCCTCTGCCGCAGCCGATACCAGCCGAGCCCCTGACCCTCTTCTGA
Upstream 100 bases:
>100_bases ACGCTAGACAGCGGCGGTATCACCGCCCCTACACCCCGGTTTCACGACCTTCAGCCAGCCGGCGTAGGCCGGCGCGATCC AGCGACGGAGGGCACGAGAC
Downstream 100 bases:
>100_bases AAGTCGCTGAGCCATACGGCAGGAGGGCCGTCCAGGAACAGGAATGCGGGCGCAGGCTCAGTAGCGGACGTCGCTCTGCG CCAGTGGCGGGTACACGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MHLHVGCAMWTHKSWQGRLLAHPLPAHERLRHYAAWCNAVEGNTTFYATPARETVATWARQTDPGFRFVVKLPKVITHER HLTDVDEVLRSFLNAMEPLGPRAHALWIQLPGAFGPADVSLLARFLRRLDTSHRYAVEVRHPAFFADPRAARLLEDALAT VGAEWIPFDTTEFFRSPPTSDAERDAWAKKPRMPLRSLALTDQPIVRYLGRDDSARTVEGWRHWVDTTVTWLREGRSPTV FIHTPDNADAPLLARRFHDEVRARVPELGPLPQPIPAEPLTLF
Sequences:
>Translated_283_residues MHLHVGCAMWTHKSWQGRLLAHPLPAHERLRHYAAWCNAVEGNTTFYATPARETVATWARQTDPGFRFVVKLPKVITHER HLTDVDEVLRSFLNAMEPLGPRAHALWIQLPGAFGPADVSLLARFLRRLDTSHRYAVEVRHPAFFADPRAARLLEDALAT VGAEWIPFDTTEFFRSPPTSDAERDAWAKKPRMPLRSLALTDQPIVRYLGRDDSARTVEGWRHWVDTTVTWLREGRSPTV FIHTPDNADAPLLARRFHDEVRARVPELGPLPQPIPAEPLTLF >Mature_283_residues MHLHVGCAMWTHKSWQGRLLAHPLPAHERLRHYAAWCNAVEGNTTFYATPARETVATWARQTDPGFRFVVKLPKVITHER HLTDVDEVLRSFLNAMEPLGPRAHALWIQLPGAFGPADVSLLARFLRRLDTSHRYAVEVRHPAFFADPRAARLLEDALAT VGAEWIPFDTTEFFRSPPTSDAERDAWAKKPRMPLRSLALTDQPIVRYLGRDDSARTVEGWRHWVDTTVTWLREGRSPTV FIHTPDNADAPLLARRFHDEVRARVPELGPLPQPIPAEPLTLF
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0759 family [H]
Homologues:
Organism=Escherichia coli, GI1788175, Length=270, Percent_Identity=36.2962962962963, Blast_Score=178, Evalue=4e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002763 [H]
Pfam domain/function: PF01904 DUF72 [H]
EC number: NA
Molecular weight: Translated: 32282; Mature: 32282
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLHVGCAMWTHKSWQGRLLAHPLPAHERLRHYAAWCNAVEGNTTFYATPARETVATWAR CEEEEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH QTDPGFRFVVKLPKVITHERHLTDVDEVLRSFLNAMEPLGPRAHALWIQLPGAFGPADVS CCCCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHH LLARFLRRLDTSHRYAVEVRHPAFFADPRAARLLEDALATVGAEWIPFDTTEFFRSPPTS HHHHHHHHHCCCCEEEEEEECCCEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC DAERDAWAKKPRMPLRSLALTDQPIVRYLGRDDSARTVEGWRHWVDTTVTWLREGRSPTV CCHHHHHHCCCCCCHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE FIHTPDNADAPLLARRFHDEVRARVPELGPLPQPIPAEPLTLF EEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHLHVGCAMWTHKSWQGRLLAHPLPAHERLRHYAAWCNAVEGNTTFYATPARETVATWAR CEEEEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH QTDPGFRFVVKLPKVITHERHLTDVDEVLRSFLNAMEPLGPRAHALWIQLPGAFGPADVS CCCCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHH LLARFLRRLDTSHRYAVEVRHPAFFADPRAARLLEDALATVGAEWIPFDTTEFFRSPPTS HHHHHHHHHCCCCEEEEEEECCCEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC DAERDAWAKKPRMPLRSLALTDQPIVRYLGRDDSARTVEGWRHWVDTTVTWLREGRSPTV CCHHHHHHCCCCCCHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE FIHTPDNADAPLLARRFHDEVRARVPELGPLPQPIPAEPLTLF EEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]