| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is phoU1 [H]
Identifier: 158317889
GI number: 158317889
Start: 7479541
End: 7480185
Strand: Direct
Name: phoU1 [H]
Synonym: Franean1_6147
Alternate gene names: 158317889
Gene position: 7479541-7480185 (Clockwise)
Preceding gene: 158317877
Following gene: 158317891
Centisome position: 83.27
GC content: 68.84
Gene sequence:
>645_bases GTGCGGGACGTCTTCCAGGAAGAACTGGAAAGCATCAACCAATCGCTGATCGAGATGACCAGCATGGTCGCGTCGGCGAT GGCACGGGCCACCACCTCGCTCCTGGACGCCGATCTTCAGCTCGCCGAGAACGTGATCAGCGCGGACGAGACCGTCGACC TGCTCCGCAACGAGATCGAGGAGCGGGCCTTCGATGTGATGGCCCGGCAGGCCCCGGTCGCGACCGACCTGCGGATGATG GTGACCACGCTGCGTATCGTCGCCGACCTGGAGCGGATGGGCGACCTCGCCCTGCACGTGGCCAAGGTCGCCCGGCGCCG CTACCCCGGGCGGGCGGTCCCGCCCGAGCTGCACGCCACGATGTTGCAGATGGGCCAGGTCGCGCAGCGCATCGTCGCCA AGGCCGGCTCGGTGATCGCCAGCCGGGACGCCGAGCTCGCCAAGGAGCTGGAGGCCGACGACGACGCGATGGACGGGCTG CACCGAGCCCTGTTCCACGTGCTGATCGAGAAGCCGTGGACCCACGGCATGGAGGCCGCCATCGACATCACCCTGTGCGG CCGCTACTACGAGCGCTATGCCGACCACGCCGTGTCGGTCGCCCGCCGGGTGATCTACCTGGTCACCGGCGAGAAGGCGG GCTGA
Upstream 100 bases:
>100_bases CGACGGCTGCGCATCATCGTCTGACGTCAACCCCCGAGGACCACCGAACGACTGTGATCGAATGGTGCTCCGAACCTCCC CTAGCTGTAAGGAGCCGTCT
Downstream 100 bases:
>100_bases CGACCCGCCCGCCTTCTCGCCGCCCGCCCCGCGCCTTCGACGACCCGCCCTCGCGCTCGGCCCCCGCGCTCGGCTGCCAG CTCCCAGCCTTCGGCCACCC
Product: phosphate uptake regulator PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MRDVFQEELESINQSLIEMTSMVASAMARATTSLLDADLQLAENVISADETVDLLRNEIEERAFDVMARQAPVATDLRMM VTTLRIVADLERMGDLALHVAKVARRRYPGRAVPPELHATMLQMGQVAQRIVAKAGSVIASRDAELAKELEADDDAMDGL HRALFHVLIEKPWTHGMEAAIDITLCGRYYERYADHAVSVARRVIYLVTGEKAG
Sequences:
>Translated_214_residues MRDVFQEELESINQSLIEMTSMVASAMARATTSLLDADLQLAENVISADETVDLLRNEIEERAFDVMARQAPVATDLRMM VTTLRIVADLERMGDLALHVAKVARRRYPGRAVPPELHATMLQMGQVAQRIVAKAGSVIASRDAELAKELEADDDAMDGL HRALFHVLIEKPWTHGMEAAIDITLCGRYYERYADHAVSVARRVIYLVTGEKAG >Mature_214_residues MRDVFQEELESINQSLIEMTSMVASAMARATTSLLDADLQLAENVISADETVDLLRNEIEERAFDVMARQAPVATDLRMM VTTLRIVADLERMGDLALHVAKVARRRYPGRAVPPELHATMLQMGQVAQRIVAKAGSVIASRDAELAKELEADDDAMDGL HRALFHVLIEKPWTHGMEAAIDITLCGRYYERYADHAVSVARRVIYLVTGEKAG
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=211, Percent_Identity=26.0663507109005, Blast_Score=85, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 23763; Mature: 23763
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDVFQEELESINQSLIEMTSMVASAMARATTSLLDADLQLAENVISADETVDLLRNEIE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERAFDVMARQAPVATDLRMMVTTLRIVADLERMGDLALHVAKVARRRYPGRAVPPELHAT HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH MLQMGQVAQRIVAKAGSVIASRDAELAKELEADDDAMDGLHRALFHVLIEKPWTHGMEAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH IDITLCGRYYERYADHAVSVARRVIYLVTGEKAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRDVFQEELESINQSLIEMTSMVASAMARATTSLLDADLQLAENVISADETVDLLRNEIE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERAFDVMARQAPVATDLRMMVTTLRIVADLERMGDLALHVAKVARRRYPGRAVPPELHAT HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH MLQMGQVAQRIVAKAGSVIASRDAELAKELEADDDAMDGLHRALFHVLIEKPWTHGMEAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH IDITLCGRYYERYADHAVSVARRVIYLVTGEKAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]