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The map label for this gene is frlC [C]

Identifier: 158317885

GI number: 158317885

Start: 7474056

End: 7474922

Strand: Reverse

Name: frlC [C]

Synonym: Franean1_6143

Alternate gene names: 158317885

Gene position: 7474922-7474056 (Counterclockwise)

Preceding gene: 158317886

Following gene: 158317884

Centisome position: 83.22

GC content: 73.59

Gene sequence:

>867_bases
ATGGTCGTCACCCCGCGGCTCGGGGCGCCGGCCGGCCCACCCGCCGCCGGGTCCCAGCCGGTGGGCGGTGGGCTGGTGGC
GCTCTCCACGGCGTCCACCTACCCGGAGTCGACGGCGACCGCCTTCGAGATGGCGGCGCGGCTCGGCTACGACGGCGTCG
AGATCATGGTCTGGACGGACCCGGTCAGCCAGGACCCGCAGGCACTGCGCCGGCTCCGTGACTACCACGGCATCCCCATC
CTGGCCGTGCACGCGCCGTGCCTGCTGCTGACGCAGCGGGTGTGGGGGACGGACCCGTGGGCGAAACTCGAGCGCGCGCG
GGCGGCGGCGGAGACCCTCGAGGCGCCCACGGTCGTCGTTCATCCACCGTTCCGGTGGCAGCGCGACTACGCCCGCGAGT
TCGTCGCCGGCATCCACCGGATGGCCGGCGAGACGGACGTCCGCTTCGCGGTGGAGAACATGTTCCCGCTGCGTGCCCGG
GGCCGGGAGGTCTCGGCCTACGCCCCCGACTGGTCGCCGATCGACGACGGCTACCGGCACGTCACGCTGGATCTCTCCCA
CACCAGCGTCTCCCGGTCGGATGCGCTGCTGATGGCGGACGAGCTCGGTGACCGGCTCGCGCACATCCACATGGCGGACG
GCACGGGGCTGGCGAAGGACGAGCACCTGGTGCCCGGCCGCGGCACGCAGCCCTGCGCCGAGCTGCTGGAGCGCCTCGCG
GTGAACGGGTTCGACGGCACGGTCGTCGTCGAGATCAACACCAGGCGCGCGGAGTCGCGCGACCAGCGTGAGGCCGACCT
CGCCGAGGCGCTGGCCTTCACCCGGCTCAACCTCGCCGCTCCGGCCGGAGTCGTCCCGGTTCCCTGA

Upstream 100 bases:

>100_bases
GGCGACGCCTCCGCCAACGCCATCTCCGTCAGCGGGCGCTTCACCAACAGCATCTTCGCCAGCGGTGCCTCCGTCTGCGG
CGGCGGCGTCGCCGTCCGGC

Downstream 100 bases:

>100_bases
CGAGGGCCTTACCGTCCGGTGGGGTAAACCACTGTCAGTGGCGGAGTTGCCGCGTAGGGGCCACTATCGGGGCGTGTCCC
CTGGATCACTCTTCGACCCG

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MVVTPRLGAPAGPPAAGSQPVGGGLVALSTASTYPESTATAFEMAARLGYDGVEIMVWTDPVSQDPQALRRLRDYHGIPI
LAVHAPCLLLTQRVWGTDPWAKLERARAAAETLEAPTVVVHPPFRWQRDYAREFVAGIHRMAGETDVRFAVENMFPLRAR
GREVSAYAPDWSPIDDGYRHVTLDLSHTSVSRSDALLMADELGDRLAHIHMADGTGLAKDEHLVPGRGTQPCAELLERLA
VNGFDGTVVVEINTRRAESRDQREADLAEALAFTRLNLAAPAGVVPVP

Sequences:

>Translated_288_residues
MVVTPRLGAPAGPPAAGSQPVGGGLVALSTASTYPESTATAFEMAARLGYDGVEIMVWTDPVSQDPQALRRLRDYHGIPI
LAVHAPCLLLTQRVWGTDPWAKLERARAAAETLEAPTVVVHPPFRWQRDYAREFVAGIHRMAGETDVRFAVENMFPLRAR
GREVSAYAPDWSPIDDGYRHVTLDLSHTSVSRSDALLMADELGDRLAHIHMADGTGLAKDEHLVPGRGTQPCAELLERLA
VNGFDGTVVVEINTRRAESRDQREADLAEALAFTRLNLAAPAGVVPVP
>Mature_288_residues
MVVTPRLGAPAGPPAAGSQPVGGGLVALSTASTYPESTATAFEMAARLGYDGVEIMVWTDPVSQDPQALRRLRDYHGIPI
LAVHAPCLLLTQRVWGTDPWAKLERARAAAETLEAPTVVVHPPFRWQRDYAREFVAGIHRMAGETDVRFAVENMFPLRAR
GREVSAYAPDWSPIDDGYRHVTLDLSHTSVSRSDALLMADELGDRLAHIHMADGTGLAKDEHLVPGRGTQPCAELLERLA
VNGFDGTVVVEINTRRAESRDQREADLAEALAFTRLNLAAPAGVVPVP

Specific function: Not Clear, May Be Involved In An Isomerization Step. [C]

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML2432 and M.tuberculosis Rv0498 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 31208; Mature: 31208

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVTPRLGAPAGPPAAGSQPVGGGLVALSTASTYPESTATAFEMAARLGYDGVEIMVWTD
CEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEEC
PVSQDPQALRRLRDYHGIPILAVHAPCLLLTQRVWGTDPWAKLERARAAAETLEAPTVVV
CCCCCHHHHHHHHHHCCCEEEEHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEE
HPPFRWQRDYAREFVAGIHRMAGETDVRFAVENMFPLRARGREVSAYAPDWSPIDDGYRH
CCCCCHHHHHHHHHHHHHHHHCCCCHHEEEHHHCCCHHHCCCEEEEECCCCCCCCCCCEE
VTLDLSHTSVSRSDALLMADELGDRLAHIHMADGTGLAKDEHLVPGRGTQPCAELLERLA
EEEEECCCCCCCCCCEEEHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
VNGFDGTVVVEINTRRAESRDQREADLAEALAFTRLNLAAPAGVVPVP
CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MVVTPRLGAPAGPPAAGSQPVGGGLVALSTASTYPESTATAFEMAARLGYDGVEIMVWTD
CEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEEC
PVSQDPQALRRLRDYHGIPILAVHAPCLLLTQRVWGTDPWAKLERARAAAETLEAPTVVV
CCCCCHHHHHHHHHHCCCEEEEHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEE
HPPFRWQRDYAREFVAGIHRMAGETDVRFAVENMFPLRARGREVSAYAPDWSPIDDGYRH
CCCCCHHHHHHHHHHHHHHHHCCCCHHEEEHHHCCCHHHCCCEEEEECCCCCCCCCCCEE
VTLDLSHTSVSRSDALLMADELGDRLAHIHMADGTGLAKDEHLVPGRGTQPCAELLERLA
EEEEECCCCCCCCCCEEEHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
VNGFDGTVVVEINTRRAESRDQREADLAEALAFTRLNLAAPAGVVPVP
CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]