| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317866
Identifier: 158317866
GI number: 158317866
Start: 7452574
End: 7453335
Strand: Direct
Name: 158317866
Synonym: Franean1_6124
Alternate gene names: NA
Gene position: 7452574-7453335 (Clockwise)
Preceding gene: 158317858
Following gene: 158317867
Centisome position: 82.97
GC content: 71.0
Gene sequence:
>762_bases ATGGCACGGCGCAGGATGTCGAATCCGCTCGCCCTGGCCGTCCTGGCGCTGTTGAACGAGCGTCCGATGCACCCTTACGA GATCTCGACGACGCTGCGTGAGCGGCGCAAGGCCGACAGCATCAAGCTCAACTTCGGTTCGCTCTACACGGTCGTCGAGA GCCTGGAACGCGCCGGCTGCATCGTCGCGACCCGGACCGTGCGCGAGGGCCGCCGCCCGGAGCGGAAGATCTACGCGATC ACCGACGCCGGACGGGTCGAGCTGGACGACTGGATGGCGGAGCTCGTCAGCACGCCGGTGAAGGAGTACACCCGCTTCGA GGCGGCCCTCTCACTGCTCCCCGTGCTGCCACCGGACGACGCCGTCCGCATGCTGAGCGAGCGGCGGCAGCGGCTGCTCG AGGAGTCCGAGGCGGCGAAGGCCACCGCGCGGCTGGCCACGGTCGAGAACCTGCCCCGGATCTTCCGCCTGGAGGGCGAG TACGTCGACGCCCTGCGGGACGCCGAGCTGCGCTTCGTGGACGCCCTCATCACCTCGATCGCCACCCGCGAGCTGGACGG CATCGAGCTCTGGGACGTCTTCCACGCCGACGCCGCCCAGCCGGAGGAGATGCACGCGCTGGTCACCGCGGTGAAGGAGA AGATCGCCGGAGGCCGGTGGGGCGAGCTGACACCGGCGCTGCTCGCCGAGATGGAGACGCTCTCCGGCAGGCCCGCGGCG ATCGAGGGCGGCGGCGACACCACCGGCGGGGGGCCGCGATGA
Upstream 100 bases:
>100_bases AAACACGGGACGCGGGCCAGCAGCCCAGGCACGGGCGACAGGGGCACCGGTAACAGGGGCACCGGCGGCACGCGAGCCGC GAACGGAGGACGGAGAACTC
Downstream 100 bases:
>100_bases CGACGTGACGACGACGGGTCCCCCGCACCGGTGCGGCAACACCGGCGCCGGGGACCCGCCCGGCGAGCGCCCGACCTCGC GGTGTTTCCACCGCGCGTAC
Product: PadR-like family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator PadR-Like Family; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; MtrY Protein; PadR Transcriptional Regulator; Padr Family Transcriptional Regulator; Ankyrin-Like Protein
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MARRRMSNPLALAVLALLNERPMHPYEISTTLRERRKADSIKLNFGSLYTVVESLERAGCIVATRTVREGRRPERKIYAI TDAGRVELDDWMAELVSTPVKEYTRFEAALSLLPVLPPDDAVRMLSERRQRLLEESEAAKATARLATVENLPRIFRLEGE YVDALRDAELRFVDALITSIATRELDGIELWDVFHADAAQPEEMHALVTAVKEKIAGGRWGELTPALLAEMETLSGRPAA IEGGGDTTGGGPR
Sequences:
>Translated_253_residues MARRRMSNPLALAVLALLNERPMHPYEISTTLRERRKADSIKLNFGSLYTVVESLERAGCIVATRTVREGRRPERKIYAI TDAGRVELDDWMAELVSTPVKEYTRFEAALSLLPVLPPDDAVRMLSERRQRLLEESEAAKATARLATVENLPRIFRLEGE YVDALRDAELRFVDALITSIATRELDGIELWDVFHADAAQPEEMHALVTAVKEKIAGGRWGELTPALLAEMETLSGRPAA IEGGGDTTGGGPR >Mature_252_residues ARRRMSNPLALAVLALLNERPMHPYEISTTLRERRKADSIKLNFGSLYTVVESLERAGCIVATRTVREGRRPERKIYAIT DAGRVELDDWMAELVSTPVKEYTRFEAALSLLPVLPPDDAVRMLSERRQRLLEESEAAKATARLATVENLPRIFRLEGEY VDALRDAELRFVDALITSIATRELDGIELWDVFHADAAQPEEMHALVTAVKEKIAGGRWGELTPALLAEMETLSGRPAAI EGGGDTTGGGPR
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28122; Mature: 27990
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRRMSNPLALAVLALLNERPMHPYEISTTLRERRKADSIKLNFGSLYTVVESLERAGC CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHCCH IVATRTVREGRRPERKIYAITDAGRVELDDWMAELVSTPVKEYTRFEAALSLLPVLPPDD HEEHHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AVRMLSERRQRLLEESEAAKATARLATVENLPRIFRLEGEYVDALRDAELRFVDALITSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCHHHHHHHHHHHHHHHHHHHHH ATRELDGIELWDVFHADAAQPEEMHALVTAVKEKIAGGRWGELTPALLAEMETLSGRPAA HHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCE IEGGGDTTGGGPR EECCCCCCCCCCC >Mature Secondary Structure ARRRMSNPLALAVLALLNERPMHPYEISTTLRERRKADSIKLNFGSLYTVVESLERAGC CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHCCH IVATRTVREGRRPERKIYAITDAGRVELDDWMAELVSTPVKEYTRFEAALSLLPVLPPDD HEEHHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AVRMLSERRQRLLEESEAAKATARLATVENLPRIFRLEGEYVDALRDAELRFVDALITSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCHHHHHHHHHHHHHHHHHHHHH ATRELDGIELWDVFHADAAQPEEMHALVTAVKEKIAGGRWGELTPALLAEMETLSGRPAA HHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCE IEGGGDTTGGGPR EECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA