| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317851
Identifier: 158317851
GI number: 158317851
Start: 7437496
End: 7437804
Strand: Reverse
Name: 158317851
Synonym: Franean1_6109
Alternate gene names: NA
Gene position: 7437804-7437496 (Counterclockwise)
Preceding gene: 158317852
Following gene: 158317850
Centisome position: 82.81
GC content: 77.02
Gene sequence:
>309_bases ATGTCCGCTGACGACGTGTCGCCGTCCGCTGGCGGCCACCCCATCGGCACGGGTGGCGCGGGTCGTGGGCGGGCCGGAGC CGCGCCGGGTGCGGGCGGGCTCATGGGGCTCAACCTCCGGTACTTCGCGCTGCGCGCGGCGATGTTCGGCGCCGTCCTCG GGGTGCTGTTCCTGGCCGGCGTGGGCGGCGTGCTGGGGTTCGCGCTCGCGGCCGTGATCAGCGGCCTGCTCAGCTACCCG CTGGCGCTGCGCCAGCGCCGGGCCGTCCTGGACAATGTCGCGGCGCGGCGCGGCGGCCGACCCTGGTGA
Upstream 100 bases:
>100_bases TTGTGATCATCGTCGGGCTGGGGTTCTTTCCATCGGTCCTGCAACGGCTCGGTTGGGTGCGCCGCCGTCGGGGGCGTCCC GCCAGAAACCGGAGAGCATG
Downstream 100 bases:
>100_bases CGGCCCCGGGCGGCCCGGCTGACCACCGGCCTGGCGGCGGGCCGGAGCGGCTGGAAGTGGCGGAGCGGCCGGAAGTGGCG GAGCGGCCGGGTCGGCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MSADDVSPSAGGHPIGTGGAGRGRAGAAPGAGGLMGLNLRYFALRAAMFGAVLGVLFLAGVGGVLGFALAAVISGLLSYP LALRQRRAVLDNVAARRGGRPW
Sequences:
>Translated_102_residues MSADDVSPSAGGHPIGTGGAGRGRAGAAPGAGGLMGLNLRYFALRAAMFGAVLGVLFLAGVGGVLGFALAAVISGLLSYP LALRQRRAVLDNVAARRGGRPW >Mature_101_residues SADDVSPSAGGHPIGTGGAGRGRAGAAPGAGGLMGLNLRYFALRAAMFGAVLGVLFLAGVGGVLGFALAAVISGLLSYPL ALRQRRAVLDNVAARRGGRPW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10088; Mature: 9957
Theoretical pI: Translated: 12.33; Mature: 12.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADDVSPSAGGHPIGTGGAGRGRAGAAPGAGGLMGLNLRYFALRAAMFGAVLGVLFLAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VGGVLGFALAAVISGLLSYPLALRQRRAVLDNVAARRGGRPW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SADDVSPSAGGHPIGTGGAGRGRAGAAPGAGGLMGLNLRYFALRAAMFGAVLGVLFLAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VGGVLGFALAAVISGLLSYPLALRQRRAVLDNVAARRGGRPW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA