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The map label for this gene is alr [H]

Identifier: 158317753

GI number: 158317753

Start: 7331207

End: 7332349

Strand: Reverse

Name: alr [H]

Synonym: Franean1_6011

Alternate gene names: 158317753

Gene position: 7332349-7331207 (Counterclockwise)

Preceding gene: 158317754

Following gene: 158317752

Centisome position: 81.63

GC content: 76.38

Gene sequence:

>1143_bases
GTGAGCCCGCCGCCCCCATCGCACCTGCCGCGTGCCTACGCGGCCATCGAGCTCGACGCCGTGCGCGACTCTGTCGCGGC
CCTGGTCGCCCGCGCCGGCGCCGCCGCGACCATGGCCGTGGTCAAGGCGGACGGGTACGGGCACGGAATGCTGCCCTGCG
CCCGGGCCGCCCTGGACGCCGGCGCGAGCTGGCTCGGGACGGCCTTCCTGGAGGAGGCGCTGGCACTGCGGGCCGCCGGG
ATCACCGTCCCGGTGCTCTCCTGGCTGGCGGCGCCGGGTGAGCGCCTCGCCGCAGGCATCGCGGCGGATGTCGACCTCTC
CGCGTCCGCCGGCTGGGCGCTCGACGACCTCGCCGCCGCGGCCCGCACCGCCGGCCGGGCCGCCCGGGTGCACCTAAAGA
TCGACACTGGCCTCGGGCGGGCCGGGGCCACCGGCGAGGACTGGCCCGGCCTGTGCGACAGCGCCGCGGCGCTCGAGGCG
GACGGGCTCATCGAGGTCGTGGGCGTGTGGAGCCACTTCGCCTTCGCCGACGCGCCCGGCCACCCGACCGTCCAGGCGCA
GATCAGCCGGTTCGGTGACGCGGTGGACGTCGCCCGCAAGGCCGGGCTGCGCCCGCAGGTGCGCCACCTCGCGAACTCGG
CCGCGACGCTGGTCAGCCCGGAGGCGCACTTCGACATGGTCCGGCCGGGCGTGTCGGTGTACGGGCTGTCGCCGGGGCCC
GAGGTCGGGCCGCCGTCCGCGTTCGGGCTGCGGCCCGCGATGACGCTGCGCGCCAGCATCGCGCTGGTGAAGCGGGTGCC
GGCGGGCACCGGAGTGTCCTACGCGCACCGCTACCGGACGTCGGCGGAGACCGGCCTCGCCGTCGTCCCGCTCGGCTACG
CCGACGGCATCCCCCGCTCGGCCACGAACACGGCCGAGGTGCTCGTGGGCGGACGCCGGCGGCGCATCGCCGGCACCGTC
TGCATGGACCAGTTCGTCATGGACGTCGGTGCCGACCCGGTGCGCGTAGGCGACGAGGTGATCCTCTTCGGCCCCGGCGA
CCGGGGCGAGCCGACCGCGGACGACTGGGCGCGCGCGCTCGGCACCATCAACTACGAGATCGTCACCCGGATCGGCCCGC
GGGTACCGCGCGTCTACATCTGA

Upstream 100 bases:

>100_bases
ATGGCCGGGCGGGGGAGCGCGGGCCCGTGCCGCTCGCCGCCGCAGACCTGCCCGCGCTCCTGCCCGGGGTCGTCGAGGAC
CTGCTTGCTAGCGTCGAGGG

Downstream 100 bases:

>100_bases
CCGCCGGATACGCCTGATCGGCCGGGACGTCTGGTCAGCGGCAGCCGCCGGTGCCGCACGCGCCGCCGCCGTGCTCGTGG
CCGGCTGTGGCGCCCCCGAA

Product: alanine racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MSPPPPSHLPRAYAAIELDAVRDSVAALVARAGAAATMAVVKADGYGHGMLPCARAALDAGASWLGTAFLEEALALRAAG
ITVPVLSWLAAPGERLAAGIAADVDLSASAGWALDDLAAAARTAGRAARVHLKIDTGLGRAGATGEDWPGLCDSAAALEA
DGLIEVVGVWSHFAFADAPGHPTVQAQISRFGDAVDVARKAGLRPQVRHLANSAATLVSPEAHFDMVRPGVSVYGLSPGP
EVGPPSAFGLRPAMTLRASIALVKRVPAGTGVSYAHRYRTSAETGLAVVPLGYADGIPRSATNTAEVLVGGRRRRIAGTV
CMDQFVMDVGADPVRVGDEVILFGPGDRGEPTADDWARALGTINYEIVTRIGPRVPRVYI

Sequences:

>Translated_380_residues
MSPPPPSHLPRAYAAIELDAVRDSVAALVARAGAAATMAVVKADGYGHGMLPCARAALDAGASWLGTAFLEEALALRAAG
ITVPVLSWLAAPGERLAAGIAADVDLSASAGWALDDLAAAARTAGRAARVHLKIDTGLGRAGATGEDWPGLCDSAAALEA
DGLIEVVGVWSHFAFADAPGHPTVQAQISRFGDAVDVARKAGLRPQVRHLANSAATLVSPEAHFDMVRPGVSVYGLSPGP
EVGPPSAFGLRPAMTLRASIALVKRVPAGTGVSYAHRYRTSAETGLAVVPLGYADGIPRSATNTAEVLVGGRRRRIAGTV
CMDQFVMDVGADPVRVGDEVILFGPGDRGEPTADDWARALGTINYEIVTRIGPRVPRVYI
>Mature_379_residues
SPPPPSHLPRAYAAIELDAVRDSVAALVARAGAAATMAVVKADGYGHGMLPCARAALDAGASWLGTAFLEEALALRAAGI
TVPVLSWLAAPGERLAAGIAADVDLSASAGWALDDLAAAARTAGRAARVHLKIDTGLGRAGATGEDWPGLCDSAAALEAD
GLIEVVGVWSHFAFADAPGHPTVQAQISRFGDAVDVARKAGLRPQVRHLANSAATLVSPEAHFDMVRPGVSVYGLSPGPE
VGPPSAFGLRPAMTLRASIALVKRVPAGTGVSYAHRYRTSAETGLAVVPLGYADGIPRSATNTAEVLVGGRRRRIAGTVC
MDQFVMDVGADPVRVGDEVILFGPGDRGEPTADDWARALGTINYEIVTRIGPRVPRVYI

Specific function: Provides the D-alanine required for cell wall biosynthesis [H]

COG id: COG0787

COG function: function code M; Alanine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alanine racemase family [H]

Homologues:

Organism=Escherichia coli, GI1790487, Length=371, Percent_Identity=35.0404312668464, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1787439, Length=372, Percent_Identity=33.3333333333333, Blast_Score=146, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000821
- InterPro:   IPR009006
- InterPro:   IPR011079
- InterPro:   IPR001608
- InterPro:   IPR020622 [H]

Pfam domain/function: PF00842 Ala_racemase_C; PF01168 Ala_racemase_N [H]

EC number: =5.1.1.1 [H]

Molecular weight: Translated: 39149; Mature: 39018

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS00395 ALANINE_RACEMASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPPPPSHLPRAYAAIELDAVRDSVAALVARAGAAATMAVVKADGYGHGMLPCARAALDA
CCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHCCCHHEEEEEEECCCCCCCHHHHHHHHHC
GASWLGTAFLEEALALRAAGITVPVLSWLAAPGERLAAGIAADVDLSASAGWALDDLAAA
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHEECCCCCCCCCCCHHHHHHH
ARTAGRAARVHLKIDTGLGRAGATGEDWPGLCDSAAALEADGLIEVVGVWSHFAFADAPG
HHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCC
HPTVQAQISRFGDAVDVARKAGLRPQVRHLANSAATLVSPEAHFDMVRPGVSVYGLSPGP
CCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCHHHHCCCHHHHHHHCCCCEEEECCCCC
EVGPPSAFGLRPAMTLRASIALVKRVPAGTGVSYAHRYRTSAETGLAVVPLGYADGIPRS
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCC
ATNTAEVLVGGRRRRIAGTVCMDQFVMDVGADPVRVGDEVILFGPGDRGEPTADDWARAL
CCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEECCCEEEEECCCCCCCCCHHHHHHHH
GTINYEIVTRIGPRVPRVYI
HCCCCEEHHHCCCCCCEECC
>Mature Secondary Structure 
SPPPPSHLPRAYAAIELDAVRDSVAALVARAGAAATMAVVKADGYGHGMLPCARAALDA
CCCCCCCCCCHHHEEEHHHHHHHHHHHHHHCCCHHEEEEEEECCCCCCCHHHHHHHHHC
GASWLGTAFLEEALALRAAGITVPVLSWLAAPGERLAAGIAADVDLSASAGWALDDLAAA
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHEECCCCCCCCCCCHHHHHHH
ARTAGRAARVHLKIDTGLGRAGATGEDWPGLCDSAAALEADGLIEVVGVWSHFAFADAPG
HHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCC
HPTVQAQISRFGDAVDVARKAGLRPQVRHLANSAATLVSPEAHFDMVRPGVSVYGLSPGP
CCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCHHHHCCCHHHHHHHCCCCEEEECCCCC
EVGPPSAFGLRPAMTLRASIALVKRVPAGTGVSYAHRYRTSAETGLAVVPLGYADGIPRS
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCC
ATNTAEVLVGGRRRRIAGTVCMDQFVMDVGADPVRVGDEVILFGPGDRGEPTADDWARAL
CCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEECCCEEEEECCCCCCCCCHHHHHHHH
GTINYEIVTRIGPRVPRVYI
HCCCCEEHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA