| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317750
Identifier: 158317750
GI number: 158317750
Start: 7327057
End: 7327959
Strand: Reverse
Name: 158317750
Synonym: Franean1_6008
Alternate gene names: NA
Gene position: 7327959-7327057 (Counterclockwise)
Preceding gene: 158317751
Following gene: 158317749
Centisome position: 81.58
GC content: 75.64
Gene sequence:
>903_bases GTGCGCAGCAGCACCGCTGCCGACCTTGTGGACGCTCCGGTGGAGCGGTCGACCCGGTCCCGCCGTACACGCAGCGACTT CCTCGCGAGCCGGCGTGATCTGCTCGACGCCGTGGGCCGGCTCCTCGCCCGCAACGGGCGCCGCTTCAGCCTCGTCGACC TCGCGGCGGAGGCGGGCGTCTCGACAGCGACCGCGTACCGCCACTTCGCCGACGTCCACGACGCCCTCGACGTGTACTAC CTCCAGCTCATCGACGTACTGGTAACCGACATCCGCGCCCTGGCGGTCGGTGAGGACCACCTGGGCAACTTCGAGGTCGT CTGCGAGGTGTGGGTCCGCTCGGCCGCGCGGTGGGGGCGGGCGGCGGTGCACGTGCGCTCCGCCCAGGGGTACCTCGCTC GGCTGCAGGCCCGTGACGACCTCGTCTCCAAGCTGCACCAGGTGCTCGCGCCGGTCGTGCTCGGCCTGGTGGACAACGGC GTGCTGCCGCCTCAGGAGCCCGAGTACGCGGTGCTGTTGTGGGCCTCGGTCTTCGACGAGCGGGTGATCGTCGACCTGCT CGACACCCTCGGCTGGTCGGTCGAGCAGGTCGCGCAGAAGCTCACCGCCTCGGCGCTGCGGATGCTCGGCTACACCGGCT GGACCCCCCTGCGGCCGGCCTTCCCGCCGGCGGGCTCCGGTGCGCAGACGCCCGCCGCCGGCCCGGTTCCCCCGGGCCCC GTGCCGGCCTCGCCCGCCTCGCCCCCGCGCCGCCACGGAGCCGCTGGTCCAGGCGGGATCGCGACGCGCGGTGCGGGCGG CCTCGGCGCCGGGCCGGTGCTGGCTCGCGCCGGCGCGCCGGCGGGCGGCGTCGACCCCCGGATCAGGCTCCGCTCCGGCG GCGCCGGCCGGCTGACCCACTAG
Upstream 100 bases:
>100_bases GCGGCGTAGGCGCGAAGTTCATGCATGTAGCGGCCCGACTGCTTCATGTACGGGCCGCGGAGAACCGGGATGGCCCGTTG TGGCCGGGAGAGGGGGGCGA
Downstream 100 bases:
>100_bases GTTTTCTCCCGGACCGGTCCCGGCGTACATGTCGGGACCGGTCTGACGCGTCCGGCCGCCGTCCGGCGACCGCCACGCCC TGACGGACACGCTGACGGGC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: TetR Family Transcriptional Regulator; Regulatory Protein TetR
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MRSSTAADLVDAPVERSTRSRRTRSDFLASRRDLLDAVGRLLARNGRRFSLVDLAAEAGVSTATAYRHFADVHDALDVYY LQLIDVLVTDIRALAVGEDHLGNFEVVCEVWVRSAARWGRAAVHVRSAQGYLARLQARDDLVSKLHQVLAPVVLGLVDNG VLPPQEPEYAVLLWASVFDERVIVDLLDTLGWSVEQVAQKLTASALRMLGYTGWTPLRPAFPPAGSGAQTPAAGPVPPGP VPASPASPPRRHGAAGPGGIATRGAGGLGAGPVLARAGAPAGGVDPRIRLRSGGAGRLTH
Sequences:
>Translated_300_residues MRSSTAADLVDAPVERSTRSRRTRSDFLASRRDLLDAVGRLLARNGRRFSLVDLAAEAGVSTATAYRHFADVHDALDVYY LQLIDVLVTDIRALAVGEDHLGNFEVVCEVWVRSAARWGRAAVHVRSAQGYLARLQARDDLVSKLHQVLAPVVLGLVDNG VLPPQEPEYAVLLWASVFDERVIVDLLDTLGWSVEQVAQKLTASALRMLGYTGWTPLRPAFPPAGSGAQTPAAGPVPPGP VPASPASPPRRHGAAGPGGIATRGAGGLGAGPVLARAGAPAGGVDPRIRLRSGGAGRLTH >Mature_300_residues MRSSTAADLVDAPVERSTRSRRTRSDFLASRRDLLDAVGRLLARNGRRFSLVDLAAEAGVSTATAYRHFADVHDALDVYY LQLIDVLVTDIRALAVGEDHLGNFEVVCEVWVRSAARWGRAAVHVRSAQGYLARLQARDDLVSKLHQVLAPVVLGLVDNG VLPPQEPEYAVLLWASVFDERVIVDLLDTLGWSVEQVAQKLTASALRMLGYTGWTPLRPAFPPAGSGAQTPAAGPVPPGP VPASPASPPRRHGAAGPGGIATRGAGGLGAGPVLARAGAPAGGVDPRIRLRSGGAGRLTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31635; Mature: 31635
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSTAADLVDAPVERSTRSRRTRSDFLASRRDLLDAVGRLLARNGRRFSLVDLAAEAGV CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCC STATAYRHFADVHDALDVYYLQLIDVLVTDIRALAVGEDHLGNFEVVCEVWVRSAARWGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCH AAVHVRSAQGYLARLQARDDLVSKLHQVLAPVVLGLVDNGVLPPQEPEYAVLLWASVFDE HHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHH RVIVDLLDTLGWSVEQVAQKLTASALRMLGYTGWTPLRPAFPPAGSGAQTPAAGPVPPGP HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPASPASPPRRHGAAGPGGIATRGAGGLGAGPVLARAGAPAGGVDPRIRLRSGGAGRLTH CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCCC >Mature Secondary Structure MRSSTAADLVDAPVERSTRSRRTRSDFLASRRDLLDAVGRLLARNGRRFSLVDLAAEAGV CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCC STATAYRHFADVHDALDVYYLQLIDVLVTDIRALAVGEDHLGNFEVVCEVWVRSAARWGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCH AAVHVRSAQGYLARLQARDDLVSKLHQVLAPVVLGLVDNGVLPPQEPEYAVLLWASVFDE HHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHH RVIVDLLDTLGWSVEQVAQKLTASALRMLGYTGWTPLRPAFPPAGSGAQTPAAGPVPPGP HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPASPASPPRRHGAAGPGGIATRGAGGLGAGPVLARAGAPAGGVDPRIRLRSGGAGRLTH CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA