| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is rimI [H]
Identifier: 158317748
GI number: 158317748
Start: 7325021
End: 7325578
Strand: Reverse
Name: rimI [H]
Synonym: Franean1_6006
Alternate gene names: 158317748
Gene position: 7325578-7325021 (Counterclockwise)
Preceding gene: 158317749
Following gene: 158317747
Centisome position: 81.56
GC content: 73.84
Gene sequence:
>558_bases ATGAGCGCCGCTGCCGTGAACCCGACGCCGAGCGCGGGCGACGTCGACCTCGTGCCGATGCGCTGGTGGCACCTGGGCGA GATCGCGACCCTGGAGCGGCAGGTCTTCGACCTGGACCCCTGGTCGGCCGAGCTCTTCTGGTCGGAGCTCGCGCAGGGCG ACAACCGGCACTACCTGGTCGCGGTCGCGGGCGGCTCGATCGTCGGCTACGCCGGGCTGGCGCTGCAGGGCGACGAGTCC TACATCCAGACGATCGGGGTCGTCCCGGCCATGCGCGGGCGTCACCTCGGATCGCGGCTGATGATCGCCCAGCTCCGGGA GGCGCGGCGGCGTGGCGCCCGCAGCTGCGGGCTCGAGGTGCGCACCGACAACCGGCCTGCGCGGGCCCTCTACACCCGGC TCGGGTTCGTCGATCTCGGCGTCCGTCGCGGCTACTACCAGCCGTCGGGCGGCGACGCCTACGTGATGCGCGTGCGGCCG ATCGACACCGTCGGCTACGGGGCGCTGCTGGACCGGGTCGAGGCGGCCGTCCTGCGGGACGCCAGGGCCGCCTCGTGA
Upstream 100 bases:
>100_bases CCAAAGTCGTCACCGCCTCGCGCTCGGAGTCGGCGCGGTCGGCCACGGCCGCCACCGGAGCAGCGCCGGCCGGAGCAGCG CCGGCCGGGACGATGCCGGT
Downstream 100 bases:
>100_bases GGGCTCTCGGCACCGTCGTGAGGGCCGCCGGCGCCGCGGCGGGGGGTAGGACATGAGGACACCGGCCCGACCGCTGGTGC TGGGCATCGAGACCTCGTGC
Product: ribosomal-protein-alanine acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSAAAVNPTPSAGDVDLVPMRWWHLGEIATLERQVFDLDPWSAELFWSELAQGDNRHYLVAVAGGSIVGYAGLALQGDES YIQTIGVVPAMRGRHLGSRLMIAQLREARRRGARSCGLEVRTDNRPARALYTRLGFVDLGVRRGYYQPSGGDAYVMRVRP IDTVGYGALLDRVEAAVLRDARAAS
Sequences:
>Translated_185_residues MSAAAVNPTPSAGDVDLVPMRWWHLGEIATLERQVFDLDPWSAELFWSELAQGDNRHYLVAVAGGSIVGYAGLALQGDES YIQTIGVVPAMRGRHLGSRLMIAQLREARRRGARSCGLEVRTDNRPARALYTRLGFVDLGVRRGYYQPSGGDAYVMRVRP IDTVGYGALLDRVEAAVLRDARAAS >Mature_184_residues SAAAVNPTPSAGDVDLVPMRWWHLGEIATLERQVFDLDPWSAELFWSELAQGDNRHYLVAVAGGSIVGYAGLALQGDESY IQTIGVVPAMRGRHLGSRLMIAQLREARRRGARSCGLEVRTDNRPARALYTRLGFVDLGVRRGYYQPSGGDAYVMRVRPI DTVGYGALLDRVEAAVLRDARAAS
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S18 (Potential) [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 20257; Mature: 20126
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAAVNPTPSAGDVDLVPMRWWHLGEIATLERQVFDLDPWSAELFWSELAQGDNRHYLV CCCCCCCCCCCCCCEEEEEECEEECCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEE AVAGGSIVGYAGLALQGDESYIQTIGVVPAMRGRHLGSRLMIAQLREARRRGARSCGLEV EEECCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCEE RTDNRPARALYTRLGFVDLGVRRGYYQPSGGDAYVMRVRPIDTVGYGALLDRVEAAVLRD EECCCHHHHHHHHHCHHEEHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH ARAAS HCCCC >Mature Secondary Structure SAAAVNPTPSAGDVDLVPMRWWHLGEIATLERQVFDLDPWSAELFWSELAQGDNRHYLV CCCCCCCCCCCCCEEEEEECEEECCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEE AVAGGSIVGYAGLALQGDESYIQTIGVVPAMRGRHLGSRLMIAQLREARRRGARSCGLEV EEECCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCEE RTDNRPARALYTRLGFVDLGVRRGYYQPSGGDAYVMRVRPIDTVGYGALLDRVEAAVLRD EECCCHHHHHHHHHCHHEEHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH ARAAS HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377 [H]