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The map label for this gene is gcp [H]

Identifier: 158317747

GI number: 158317747

Start: 7323946

End: 7324968

Strand: Reverse

Name: gcp [H]

Synonym: Franean1_6005

Alternate gene names: 158317747

Gene position: 7324968-7323946 (Counterclockwise)

Preceding gene: 158317748

Following gene: 158317745

Centisome position: 81.55

GC content: 76.64

Gene sequence:

>1023_bases
ATGAGGACACCGGCCCGACCGCTGGTGCTGGGCATCGAGACCTCGTGCGACGAGACCGGCGTCGGCCTCGTCCGTGGCGG
CGAGTTGCTCGCCGACGCGCTCGCCTCCTCGGTCGACGAGCACGCCCGGTACGGCGGCGTGGTGCCCGAGATCGCCGCGC
GGGCGCACCTGGAGGCGATGGTCCCGACGATCGAGCTGGCGTTGGACCGCGCCGGCCTGCGCCCCCGGGACGTCGACGCC
GTCGCGGTGACATCCGGCCCGGGGCTGGCCGGCGCGCTGCTGGTCGGGGTCGCCGCGGCGAAGGCGTACGCGCTGGCGCT
GGGTGTCCCGCTGCACGGGGTGCACCATCTCGCCGCGCACGTCGCCGTCGACACGCTTGAGCACGGCCCGCTGCCGCGCC
CGGCGGTGGCGCTGCTGGTCTCTGGTGGGCACAGCTCGTTGCTGCTGGTCCCCGATCTCGCGGCCGAGCCGGTCGAGTCG
CTGGGGGCCACGGTGGACGACGCCGCGGGGGAGGCCTACGACAAGGTCGCCCGGTTGCTCGGCATGCCGTTCCCGGGTGG
CCCGCCGATCGACGCGGCGGCCCGCGAGGGCAGCCCGCGCATCCCGTTCCCGCGCGCCAAGGCGGGGGACGGCACGTTCG
ACTTCTCCTTCTCCGGGCTCAAGACCGCGGTCGCCCGCTGGGTGGAGGCCCGGCGGCGGGCCGGCGAGCCCGTGCCGGTC
GCGGATGTCGCGGCGTCGTTCCAGGAGGCCGTGGCGGACGTGCTCACCGCGAAGGCGGTCGCGGCCTGCCGGGCGCACGG
TGTGGACACCCTGGTGGTCGGGGGCGGTGTCGCGGCCAACAGCCGGCTGCGCGTGCTCGCCGCGCTGCGCTGCGAGGCGG
CGGGCATCACGCTGCGGATCCCGCGGCCGGGGCTGTGCACCGACAACGGCGCGATGGTCGCGGCGCTCGGGTCGCTGCGG
GTCGAGGCCGGCGTCGAGCCCTCGCCGCTGGACCTTCCCGCGTCCTCCACGCTCGCCCTCTGA

Upstream 100 bases:

>100_bases
GACCGGGTCGAGGCGGCCGTCCTGCGGGACGCCAGGGCCGCCTCGTGAGGGCTCTCGGCACCGTCGTGAGGGCCGCCGGC
GCCGCGGCGGGGGGTAGGAC

Downstream 100 bases:

>100_bases
CCGTTTCCGCTCTCTGACGTCTCCACCCGCTGACGGCCTTCTGACCACCTTCGCCGGCCCGGGACCCGCCACGGGTCCCG
GGCCGGGCGGCGCTCAGGCG

Product: metalloendopeptidase glycoprotease family

Products: NA

Alternate protein names: Glycoprotease [H]

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MRTPARPLVLGIETSCDETGVGLVRGGELLADALASSVDEHARYGGVVPEIAARAHLEAMVPTIELALDRAGLRPRDVDA
VAVTSGPGLAGALLVGVAAAKAYALALGVPLHGVHHLAAHVAVDTLEHGPLPRPAVALLVSGGHSSLLLVPDLAAEPVES
LGATVDDAAGEAYDKVARLLGMPFPGGPPIDAAAREGSPRIPFPRAKAGDGTFDFSFSGLKTAVARWVEARRRAGEPVPV
ADVAASFQEAVADVLTAKAVAACRAHGVDTLVVGGGVAANSRLRVLAALRCEAAGITLRIPRPGLCTDNGAMVAALGSLR
VEAGVEPSPLDLPASSTLAL

Sequences:

>Translated_340_residues
MRTPARPLVLGIETSCDETGVGLVRGGELLADALASSVDEHARYGGVVPEIAARAHLEAMVPTIELALDRAGLRPRDVDA
VAVTSGPGLAGALLVGVAAAKAYALALGVPLHGVHHLAAHVAVDTLEHGPLPRPAVALLVSGGHSSLLLVPDLAAEPVES
LGATVDDAAGEAYDKVARLLGMPFPGGPPIDAAAREGSPRIPFPRAKAGDGTFDFSFSGLKTAVARWVEARRRAGEPVPV
ADVAASFQEAVADVLTAKAVAACRAHGVDTLVVGGGVAANSRLRVLAALRCEAAGITLRIPRPGLCTDNGAMVAALGSLR
VEAGVEPSPLDLPASSTLAL
>Mature_340_residues
MRTPARPLVLGIETSCDETGVGLVRGGELLADALASSVDEHARYGGVVPEIAARAHLEAMVPTIELALDRAGLRPRDVDA
VAVTSGPGLAGALLVGVAAAKAYALALGVPLHGVHHLAAHVAVDTLEHGPLPRPAVALLVSGGHSSLLLVPDLAAEPVES
LGATVDDAAGEAYDKVARLLGMPFPGGPPIDAAAREGSPRIPFPRAKAGDGTFDFSFSGLKTAVARWVEARRRAGEPVPV
ADVAASFQEAVADVLTAKAVAACRAHGVDTLVVGGGVAANSRLRVLAALRCEAAGITLRIPRPGLCTDNGAMVAALGSLR
VEAGVEPSPLDLPASSTLAL

Specific function: Could Be A Metalloprotease. [C]

COG id: COG0533

COG function: function code O; Metal-dependent proteases with possible chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Homo sapiens, GI116812636, Length=344, Percent_Identity=33.7209302325581, Blast_Score=147, Evalue=1e-35,
Organism=Homo sapiens, GI8923380, Length=325, Percent_Identity=33.8461538461538, Blast_Score=130, Evalue=2e-30,
Organism=Escherichia coli, GI1789445, Length=318, Percent_Identity=46.5408805031447, Blast_Score=250, Evalue=8e-68,
Organism=Caenorhabditis elegans, GI17557464, Length=348, Percent_Identity=33.6206896551724, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI71995670, Length=334, Percent_Identity=29.3413173652695, Blast_Score=118, Evalue=5e-27,
Organism=Saccharomyces cerevisiae, GI6320099, Length=369, Percent_Identity=30.3523035230352, Blast_Score=117, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6322891, Length=355, Percent_Identity=26.4788732394366, Blast_Score=90, Evalue=4e-19,
Organism=Drosophila melanogaster, GI20129063, Length=342, Percent_Identity=36.2573099415205, Blast_Score=154, Evalue=9e-38,
Organism=Drosophila melanogaster, GI21357207, Length=331, Percent_Identity=30.5135951661631, Blast_Score=140, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022450
- InterPro:   IPR000905
- InterPro:   IPR017860
- InterPro:   IPR017861 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: =3.4.24.57 [H]

Molecular weight: Translated: 34341; Mature: 34341

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTPARPLVLGIETSCDETGVGLVRGGELLADALASSVDEHARYGGVVPEIAARAHLEAM
CCCCCCCEEEEEECCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VPTIELALDRAGLRPRDVDAVAVTSGPGLAGALLVGVAAAKAYALALGVPLHGVHHLAAH
HHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VAVDTLEHGPLPRPAVALLVSGGHSSLLLVPDLAAEPVESLGATVDDAAGEAYDKVARLL
HHHHHHHCCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHH
GMPFPGGPPIDAAAREGSPRIPFPRAKAGDGTFDFSFSGLKTAVARWVEARRRAGEPVPV
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCH
ADVAASFQEAVADVLTAKAVAACRAHGVDTLVVGGGVAANSRLRVLAALRCEAAGITLRI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCEEEEC
PRPGLCTDNGAMVAALGSLRVEAGVEPSPLDLPASSTLAL
CCCCCCCCCCCEEEEEHHEHEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTPARPLVLGIETSCDETGVGLVRGGELLADALASSVDEHARYGGVVPEIAARAHLEAM
CCCCCCCEEEEEECCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VPTIELALDRAGLRPRDVDAVAVTSGPGLAGALLVGVAAAKAYALALGVPLHGVHHLAAH
HHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VAVDTLEHGPLPRPAVALLVSGGHSSLLLVPDLAAEPVESLGATVDDAAGEAYDKVARLL
HHHHHHHCCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHH
GMPFPGGPPIDAAAREGSPRIPFPRAKAGDGTFDFSFSGLKTAVARWVEARRRAGEPVPV
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCH
ADVAASFQEAVADVLTAKAVAACRAHGVDTLVVGGGVAANSRLRVLAALRCEAAGITLRI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCEEEEC
PRPGLCTDNGAMVAALGSLRVEAGVEPSPLDLPASSTLAL
CCCCCCCCCCCEEEEEHHEHEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA