| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317727
Identifier: 158317727
GI number: 158317727
Start: 7293737
End: 7294261
Strand: Direct
Name: 158317727
Synonym: Franean1_5985
Alternate gene names: NA
Gene position: 7293737-7294261 (Clockwise)
Preceding gene: 158317726
Following gene: 158317732
Centisome position: 81.2
GC content: 71.81
Gene sequence:
>525_bases ATGCATGTCGGCCAGCAGGGCCTGCAGCAGGTTCTCCTGATCGTCGGCGCGGACGGGATCTGGTCCGCCACCCGGCGGCT CCTGCACCCCACCGCGACAGAACCCGGGTACGCCGGGCTCTACACCGTGTCGGGCGAGTCCCACGGCCTTGACATCGAAC CCGACGCGTTCAACATGATCTTCGGACGGCGGGGTGCCTTCCTCCACGTGCCGGCGCCGGACGGCAGGGTCCTGCGCGCG ACGACCCGCGTGCACGGCGGCACGCTCCTGCACACCCTGCCGCTCGTGCGTGGTCACCATGACGGCCGGATCGTCCTGAT CGGCGACGCGGCCCATCCAGTGGGCGCCGGGCAGGGCGCGTCGATGGCGCTGAAGGACGCCGTCGTCCTCGCGCGGGAGC TCGGCCGGCGGACCACTACGAGCGACGCGCTGGCGGTCTACGACCGGCTGCGCGGCGACCGGCTGGCTCTTTGGCCTTGT TCCATTCCAGGCGCAACGCGGGCAGCGTCCACGGCACGGAGGTGA
Upstream 100 bases:
>100_bases CCCGCACACCGGCGAGCAACAGCTCGGTGAGCGTGCCGACGACTTCCTCGTCGGAGAAACCGGCCTCGTTCGACGGAAGC AGGGCGTAGGCCAGCGTCGA
Downstream 100 bases:
>100_bases GCATGCCCCCGGTCAGGCCATAGGTCCGCTCCGCCTCCCGCTGCGACAGGGCCGCCTTCACCCGAGCCAGACCCCAGTTG AACACGAACCGGGCCGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MHVGQQGLQQVLLIVGADGIWSATRRLLHPTATEPGYAGLYTVSGESHGLDIEPDAFNMIFGRRGAFLHVPAPDGRVLRA TTRVHGGTLLHTLPLVRGHHDGRIVLIGDAAHPVGAGQGASMALKDAVVLARELGRRTTTSDALAVYDRLRGDRLALWPC SIPGATRAASTARR
Sequences:
>Translated_174_residues MHVGQQGLQQVLLIVGADGIWSATRRLLHPTATEPGYAGLYTVSGESHGLDIEPDAFNMIFGRRGAFLHVPAPDGRVLRA TTRVHGGTLLHTLPLVRGHHDGRIVLIGDAAHPVGAGQGASMALKDAVVLARELGRRTTTSDALAVYDRLRGDRLALWPC SIPGATRAASTARR >Mature_174_residues MHVGQQGLQQVLLIVGADGIWSATRRLLHPTATEPGYAGLYTVSGESHGLDIEPDAFNMIFGRRGAFLHVPAPDGRVLRA TTRVHGGTLLHTLPLVRGHHDGRIVLIGDAAHPVGAGQGASMALKDAVVLARELGRRTTTSDALAVYDRLRGDRLALWPC SIPGATRAASTARR
Specific function: Unknown
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18488; Mature: 18488
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVGQQGLQQVLLIVGADGIWSATRRLLHPTATEPGYAGLYTVSGESHGLDIEPDAFNMI CCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHE FGRRGAFLHVPAPDGRVLRATTRVHGGTLLHTLPLVRGHHDGRIVLIGDAAHPVGAGQGA ECCCCCEEEECCCCCCEEEEEEECCCCCCEEHHHHHCCCCCCEEEEEECCCCCCCCCCCC SMALKDAVVLARELGRRTTTSDALAVYDRLRGDRLALWPCSIPGATRAASTARR CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCCC >Mature Secondary Structure MHVGQQGLQQVLLIVGADGIWSATRRLLHPTATEPGYAGLYTVSGESHGLDIEPDAFNMI CCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHE FGRRGAFLHVPAPDGRVLRATTRVHGGTLLHTLPLVRGHHDGRIVLIGDAAHPVGAGQGA ECCCCCEEEECCCCCCEEEEEEECCCCCCEEHHHHHCCCCCCEEEEEECCCCCCCCCCCC SMALKDAVVLARELGRRTTTSDALAVYDRLRGDRLALWPCSIPGATRAASTARR CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA