| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317695
Identifier: 158317695
GI number: 158317695
Start: 7259431
End: 7260057
Strand: Direct
Name: 158317695
Synonym: Franean1_5953
Alternate gene names: NA
Gene position: 7259431-7260057 (Clockwise)
Preceding gene: 158317691
Following gene: 158317696
Centisome position: 80.82
GC content: 70.02
Gene sequence:
>627_bases GTGAATCTCGACCGGCTGAAGGTCTCGGTCAGCCGCACCGGAACCCCCCGAGGCGTGCGGGTGACGTTCGACCGTCACAG CCGCACGGCCGACGGCGGCATACCGGCCGGCGCCCGGCGATTCGTCTTTCTCTTCGACTCGGCCCTCCGCTTCAATCCCA CCGCGTTCCCGGTCTGTTCCAGGCAGACCATTGACACCGAGGGCGTTGCCGCCTGCCCGCCTGGGTCGAGAGTCGGTTCG GCGGTCGGGACCTACCTGGACGGCAGCCAGGTGGAGGCCGTCGCGGTGAACAGCCAGGTCGCCGGCGGCCCCGGCGTCCT TCTCGCGTTTCCCGCCACCGGCCTCGTACTCGAGCAGACGCTCGAGCGGGCCACGACCCCGTATCAGCGGGAGTACACCT GGGCGATCGACGAACTGCTGCCACCCAACGAAACCCCGCCGCAGAACAGGCCGGGCACCACCCGGTTCGTCATCACCTTG GGTGCCACGACCACCGCCGGCGGCCGTCCGGTCAGCTATGTCGAGACGGCCGACCCACACGGCCCGTACTCGTTCGGCCT GTGGAGCGAGTTCGTCACCGGCCAGGTCGCCCTGCCGACCGACCACGCCTTGCCGCGGCCACGCTAA
Upstream 100 bases:
>100_bases TTCTCACCGCCGCCACCGGCGCGGCCGCGGGATCTCCATCCCCACCGGATCCGGCCCCACTCGGACCACAGCGCCCCGCG GAGCCGGAGGTCGAGGCCCG
Downstream 100 bases:
>100_bases CCCATCCGCTTGCCACTTCGAGCCGAGCCCTCGAGCCGTGACCGAGGCCGACGACACGCCGATGATCTCCCGTGTCCTGA CGCGCAGAAGCAACTACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MNLDRLKVSVSRTGTPRGVRVTFDRHSRTADGGIPAGARRFVFLFDSALRFNPTAFPVCSRQTIDTEGVAACPPGSRVGS AVGTYLDGSQVEAVAVNSQVAGGPGVLLAFPATGLVLEQTLERATTPYQREYTWAIDELLPPNETPPQNRPGTTRFVITL GATTTAGGRPVSYVETADPHGPYSFGLWSEFVTGQVALPTDHALPRPR
Sequences:
>Translated_208_residues MNLDRLKVSVSRTGTPRGVRVTFDRHSRTADGGIPAGARRFVFLFDSALRFNPTAFPVCSRQTIDTEGVAACPPGSRVGS AVGTYLDGSQVEAVAVNSQVAGGPGVLLAFPATGLVLEQTLERATTPYQREYTWAIDELLPPNETPPQNRPGTTRFVITL GATTTAGGRPVSYVETADPHGPYSFGLWSEFVTGQVALPTDHALPRPR >Mature_208_residues MNLDRLKVSVSRTGTPRGVRVTFDRHSRTADGGIPAGARRFVFLFDSALRFNPTAFPVCSRQTIDTEGVAACPPGSRVGS AVGTYLDGSQVEAVAVNSQVAGGPGVLLAFPATGLVLEQTLERATTPYQREYTWAIDELLPPNETPPQNRPGTTRFVITL GATTTAGGRPVSYVETADPHGPYSFGLWSEFVTGQVALPTDHALPRPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22210; Mature: 22210
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDRLKVSVSRTGTPRGVRVTFDRHSRTADGGIPAGARRFVFLFDSALRFNPTAFPVCS CCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCHHCCCCCCCCCC RQTIDTEGVAACPPGSRVGSAVGTYLDGSQVEAVAVNSQVAGGPGVLLAFPATGLVLEQT CCEECCCCEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCCHHHHHH LERATTPYQREYTWAIDELLPPNETPPQNRPGTTRFVITLGATTTAGGRPVSYVETADPH HHHHCCCCCCEEEEEHHHCCCCCCCCCCCCCCCEEEEEEECCEECCCCCCEEEEECCCCC GPYSFGLWSEFVTGQVALPTDHALPRPR CCEEHHHHHHHHCCEEECCCCCCCCCCC >Mature Secondary Structure MNLDRLKVSVSRTGTPRGVRVTFDRHSRTADGGIPAGARRFVFLFDSALRFNPTAFPVCS CCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCHHCCCCCCCCCC RQTIDTEGVAACPPGSRVGSAVGTYLDGSQVEAVAVNSQVAGGPGVLLAFPATGLVLEQT CCEECCCCEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCCHHHHHH LERATTPYQREYTWAIDELLPPNETPPQNRPGTTRFVITLGATTTAGGRPVSYVETADPH HHHHCCCCCCEEEEEHHHCCCCCCCCCCCCCCCEEEEEEECCEECCCCCCEEEEECCCCC GPYSFGLWSEFVTGQVALPTDHALPRPR CCEEHHHHHHHHCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA