| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cobC [C]
Identifier: 158317659
GI number: 158317659
Start: 7188583
End: 7189299
Strand: Direct
Name: cobC [C]
Synonym: Franean1_5917
Alternate gene names: 158317659
Gene position: 7188583-7189299 (Clockwise)
Preceding gene: 158317658
Following gene: 158317662
Centisome position: 80.03
GC content: 74.48
Gene sequence:
>717_bases ATGCCCGACACCGATCTGCTGCTGGTCCGGCACGGCGAAGCACACTGCGACACCGCGGGCATCGCCGGCGGCGATCTCGG CTGCACCGGCCTGACCAGGCGAGGACGTTCCCAGGCAGAACGAGCCGCCCGCCGGCTGACAGTCATGCACACCATGGAAC GCCGGGTGGACGCGGTGTACGCCGACCCACGCCGCCGGGTCCGGGAGACCGCGGAGATCATCGCGGGCCGGCTGCGGATG CCGGTGATCCTCGAACCCCGGCTGGCCGAGGCCGGCCACGGCAGCGCCGACGGCCAGTCCTGGACCGACATCCGGACCAC GTTCGGCGGCACGCCCGCGGACCGGCCCGACGACCCGGTCGCCCCCGGCGCGGAAAGCTGGAACCACTTCGTCGACCGGG CGGCCGCTGGGCTGCGGCACATGGTGGAGCGCCACCGCGGCCAACGAGCCCTGGTCGTCACGCACGCGGCGACCGTCGAG GTGGCGCACGCGACGATGCTCGGGCTGCCGCACGACCCCGACCCGCGGGCCGCGTTCGTGCTGGCGCACGCGTCCATCAC CTGGTGGTCGCACCGCACCTCGGAGACCGGCCCGCCCCGGTGGCATCTGGTGTGGCACAACTCCACCGCGCATCTGGCCC ACAGCCTGTTCGACCGGGACGTCGAGCCCGCCGTCCGGACGCGCCGTGACGTACGGCGGCCGCCGGGCCGTCCGTAG
Upstream 100 bases:
>100_bases TCCGATCAGCGACGTCGCGGGGCGCCAGACGGCTCGCGCGCGGCGATCCGGGCCGTTGTCATGGCCGCGGGTTCTGCCGC CCTGGCGCGAGGAGACGCGC
Downstream 100 bases:
>100_bases GCTCTAGCCCGTGACTCCTCCGACGGTTGGAGCCGTCGGCTTCTCAGGCCGCTTCCGCGGCCTGACGGGCCAGCCCGACC CGAAGAATGTTGACCGCCGC
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: Phosphoglycerate/Bisphosphoglycerate Mutase
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MPDTDLLLVRHGEAHCDTAGIAGGDLGCTGLTRRGRSQAERAARRLTVMHTMERRVDAVYADPRRRVRETAEIIAGRLRM PVILEPRLAEAGHGSADGQSWTDIRTTFGGTPADRPDDPVAPGAESWNHFVDRAAAGLRHMVERHRGQRALVVTHAATVE VAHATMLGLPHDPDPRAAFVLAHASITWWSHRTSETGPPRWHLVWHNSTAHLAHSLFDRDVEPAVRTRRDVRRPPGRP
Sequences:
>Translated_238_residues MPDTDLLLVRHGEAHCDTAGIAGGDLGCTGLTRRGRSQAERAARRLTVMHTMERRVDAVYADPRRRVRETAEIIAGRLRM PVILEPRLAEAGHGSADGQSWTDIRTTFGGTPADRPDDPVAPGAESWNHFVDRAAAGLRHMVERHRGQRALVVTHAATVE VAHATMLGLPHDPDPRAAFVLAHASITWWSHRTSETGPPRWHLVWHNSTAHLAHSLFDRDVEPAVRTRRDVRRPPGRP >Mature_237_residues PDTDLLLVRHGEAHCDTAGIAGGDLGCTGLTRRGRSQAERAARRLTVMHTMERRVDAVYADPRRRVRETAEIIAGRLRMP VILEPRLAEAGHGSADGQSWTDIRTTFGGTPADRPDDPVAPGAESWNHFVDRAAAGLRHMVERHRGQRALVVTHAATVEV AHATMLGLPHDPDPRAAFVLAHASITWWSHRTSETGPPRWHLVWHNSTAHLAHSLFDRDVEPAVRTRRDVRRPPGRP
Specific function: Converts N1-(5-Phospho-Alpha-D-Ribosyl)-5,6- Dimethylbenzimidazole Into N1-Alpha-D-Ribosyl-5,6- Dimethylbenzimidazole; Involved In The Assembly Of The Nucleotide Loop Of Cobalamin. [C]
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.73 [C]
Molecular weight: Translated: 26378; Mature: 26247
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDTDLLLVRHGEAHCDTAGIAGGDLGCTGLTRRGRSQAERAARRLTVMHTMERRVDAVY CCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH ADPRRRVRETAEIIAGRLRMPVILEPRLAEAGHGSADGQSWTDIRTTFGGTPADRPDDPV CCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC APGAESWNHFVDRAAAGLRHMVERHRGQRALVVTHAATVEVAHATMLGLPHDPDPRAAFV CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCEEEE LAHASITWWSHRTSETGPPRWHLVWHNSTAHLAHSLFDRDVEPAVRTRRDVRRPPGRP EEEEEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure PDTDLLLVRHGEAHCDTAGIAGGDLGCTGLTRRGRSQAERAARRLTVMHTMERRVDAVY CCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH ADPRRRVRETAEIIAGRLRMPVILEPRLAEAGHGSADGQSWTDIRTTFGGTPADRPDDPV CCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC APGAESWNHFVDRAAAGLRHMVERHRGQRALVVTHAATVEVAHATMLGLPHDPDPRAAFV CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCEEEE LAHASITWWSHRTSETGPPRWHLVWHNSTAHLAHSLFDRDVEPAVRTRRDVRRPPGRP EEEEEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA